Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.8e-104 382.1 212 100.0
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 4.3e-97 358.2 210 94.8
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 1.4e-71 273.5 212 75.5
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 4.0e-71 271.9 210 73.3
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 1.1e-68 263.8 213 71.4
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 1.3e-66 256.9 211 70.6
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 4.3e-65 251.9 211 70.1
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 1.6e-64 250.0 214 68.2
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.1e-59 233.0 210 64.8
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.1e-59 233.0 210 64.8
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 2.1e-59 233.0 208 63.0
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.7e-59 232.6 213 64.8
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.2e-54 217.2 216 61.1
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.0e-54 216.5 209 60.8
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.9e-54 214.9 214 59.8
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 2.2e-53 213.0 214 61.2
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 2.9e-53 212.6 209 58.4
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.9e-53 212.6 210 60.0
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 4.2e-52 208.8 211 59.2
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 5.5e-52 208.4 210 60.0
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 9.4e-52 207.6 213 58.7
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.2e-51 207.2 210 58.1
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 2.7e-51 206.1 198 62.1
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.7e-51 206.1 213 56.8
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 5.1e-50 201.8 211 56.4
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 6.7e-50 201.4 210 56.7
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 6.7e-50 201.4 210 55.7
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 5.7e-49 198.4 211 55.5
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 2.2e-48 196.4 211 57.3
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 6.3e-48 194.9 209 56.9
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 1.8e-47 193.4 210 53.3
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 5.3e-47 191.8 211 53.6
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 6.9e-47 191.4 214 53.7
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.5e-46 190.3 210 53.8
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 1.5e-46 190.3 201 56.2
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 2.0e-46 189.9 216 51.9
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.6e-46 189.5 211 53.6
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 5.9e-46 188.3 209 55.0
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 7.7e-46 188.0 211 54.0
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 1.0e-45 187.6 210 52.4
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 1.0e-45 187.6 211 52.6
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 3.8e-45 185.7 214 54.2
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 8.5e-45 184.5 219 50.7
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 1.4e-44 183.7 214 53.7
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 4.2e-44 182.2 213 53.1
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.2e-44 182.2 212 53.3
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 5.5e-44 181.8 207 54.1
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 7.2e-44 181.4 214 53.7
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 9.4e-44 181.0 210 52.9
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.2e-43 180.6 213 51.6
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 2.1e-43 179.9 214 53.7
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 2.1e-43 179.9 211 50.7
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 3.6e-43 179.1 208 52.4
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 1.0e-42 177.6 199 54.3
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.0e-42 177.6 215 52.6
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 3.0e-42 176.0 198 54.0
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.9e-42 175.6 213 50.2
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 8.8e-42 174.5 209 48.8
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 1.1e-41 174.1 214 51.9
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 2.0e-41 173.3 210 51.4
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 4.4e-41 172.2 214 51.4
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 5.7e-41 171.8 205 51.7
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 7.4e-41 171.4 204 51.5
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 9.7e-41 171.0 209 47.4
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.3e-40 170.6 214 50.9
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.3e-40 170.6 213 49.3
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 1.7e-40 170.2 213 49.8
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 2.8e-40 169.5 211 50.2
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 2.8e-40 169.5 208 50.0
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 2.8e-40 169.5 210 50.0
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 3.7e-40 169.1 211 49.8
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 4.8e-40 168.7 211 49.8
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 4.8e-40 168.7 211 50.2
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 6.3e-40 168.3 215 48.8
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 6.3e-40 168.3 213 49.3
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 6.3e-40 168.3 211 50.2
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 1.1e-39 167.5 212 50.9
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 1.4e-39 167.2 213 48.8
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.4e-39 166.4 209 47.8
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 3.1e-39 166.0 211 48.3
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 4.1e-39 165.6 198 51.5
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 9.1e-39 164.5 202 51.0
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 9.1e-39 164.5 209 47.4
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.2e-38 164.1 210 51.4
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.2e-38 164.1 209 47.4
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.0e-38 163.3 208 49.0
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.0e-38 163.3 215 50.2
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 3.5e-38 162.5 209 49.8
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 3.5e-38 162.5 215 49.3
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 7.7e-38 161.4 207 48.3
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.0e-37 161.0 217 49.3
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 2.2e-37 159.8 196 50.5
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 2.2e-37 159.8 213 46.9
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 2.9e-37 159.5 196 50.5
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.9e-37 159.5 213 48.4
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 3.8e-37 159.1 212 47.6
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 5.0e-37 158.7 196 50.0
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 5.0e-37 158.7 196 50.0
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 5.0e-37 158.7 215 47.9
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 1.1e-36 157.5 209 48.3
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 2.5e-36 156.4 190 51.1
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 2.5e-36 156.4 213 47.9
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 4.2e-36 155.6 178 52.8
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 4.2e-36 155.6 213 46.9
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 5.5e-36 155.2 208 48.6
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 5.5e-36 155.2 208 46.2
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 9.4e-36 154.5 200 50.0
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 9.4e-36 154.5 194 50.0
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 3.6e-35 152.5 213 46.9
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 4.7e-35 152.1 213 46.5
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 6.1e-35 151.8 200 49.0
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 8.0e-35 151.4 214 50.5
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 6.7e-34 148.3 208 47.6
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 6.7e-34 148.3 221 43.4
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.1e-33 147.5 217 44.2
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.5e-33 147.1 211 45.5
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 1.5e-33 147.1 200 48.0
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 2.6e-33 146.4 200 46.5
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 4.4e-33 145.6 219 44.3
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 4.4e-33 145.6 207 42.0
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 6.3e-32 141.7 200 47.0
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.1e-31 141.0 139 57.6
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 1.4e-31 140.6 211 43.1
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 1.4e-31 140.6 215 43.3
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 2.4e-31 139.8 204 45.1
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 2.4e-31 139.8 215 43.7
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 4.1e-31 139.0 204 45.1
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 5.3e-31 138.7 213 45.1
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 9.1e-31 137.9 210 41.9
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 9.1e-31 137.9 206 44.2
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 9.1e-31 137.9 142 57.0
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 2.0e-30 136.7 212 42.9
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 3.5e-30 136.0 219 42.5
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 5.0e-29 132.1 216 44.4
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.2e-28 129.4 207 43.0
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 1.2e-27 127.5 163 50.9
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 1.2e-27 127.5 210 41.9
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.4e-26 124.0 217 40.1
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 6.8e-26 121.7 210 40.0
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 2.8e-24 116.3 206 40.3
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 2.7e-22 109.8 198 38.9
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 1.0e-21 107.8 217 37.8
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 8.5e-21 104.8 205 36.1
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.5e-20 104.0 218 36.2
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 1.5e-20 104.0 206 38.8
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.9e-20 103.6 190 37.4
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 6.1e-19 98.6 116 49.1
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 1.1e-15 87.8 208 34.1
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.4e-15 87.4 115 48.7
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 7.0e-15 85.1 136 41.2
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 8.6e-13 78.2 135 38.5
FAN28G2101 Fragaria x ananassa HOM05D004648 ORTHO05D005782 4.7e-11 72.4 56 71.4


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