Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 2.2e-39 165.2 86 100.0
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 2.2e-39 165.2 86 100.0
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 8.2e-39 163.3 85 98.8
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 4.1e-38 161.0 86 96.5
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 5.3e-38 160.6 84 97.6
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 5.3e-38 160.6 84 97.6
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 5.3e-38 160.6 84 97.6
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 5.3e-38 160.6 84 97.6
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 5.3e-38 160.6 84 97.6
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 7.0e-38 160.2 83 98.8
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 7.0e-38 160.2 86 96.5
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 7.0e-38 160.2 86 96.5
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 95.3
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 95.3
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 95.3
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 9.1e-38 159.8 86 96.5
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 1.5e-37 159.1 86 96.5
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 1.5e-37 159.1 86 94.2
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 1.5e-37 159.1 86 96.5
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 1.5e-37 159.1 86 95.3
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 2.0e-37 158.7 84 96.4
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 2.0e-37 158.7 84 96.4
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 2.0e-37 158.7 86 95.3
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 2.6e-37 158.3 86 95.3
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 2.6e-37 158.3 86 95.3
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 2.6e-37 158.3 83 96.4
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.5e-37 157.9 86 95.3
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 3.5e-37 157.9 86 95.3
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 3.5e-37 157.9 84 95.2
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 3.5e-37 157.9 86 94.2
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 4.5e-37 157.5 86 95.3
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 4.5e-37 157.5 86 95.3
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 4.5e-37 157.5 83 96.4
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 5.9e-37 157.1 86 94.2
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 5.9e-37 157.1 86 94.2
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 7.7e-37 156.8 86 94.2
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 7.7e-37 156.8 86 94.2
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 1.0e-36 156.4 86 94.2
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 93.0
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 93.0
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 93.0
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 93.0
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 94.2
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 94.2
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 1.3e-36 156.0 86 93.0
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 1.3e-36 156.0 83 95.2
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 1.7e-36 155.6 83 95.2
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 2.9e-36 154.8 83 95.2
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 2.9e-36 154.8 83 95.2
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 2.9e-36 154.8 84 92.9
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 2.9e-36 154.8 84 92.9
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.8e-36 154.5 86 93.0
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 3.8e-36 154.5 86 93.0
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 3.8e-36 154.5 86 90.7
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 8.5e-36 153.3 86 91.9
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 1.1e-35 152.9 83 91.6
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 1.1e-35 152.9 86 91.9
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 1.9e-35 152.1 86 93.0
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 3.2e-35 151.4 87 92.0
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 3.2e-35 151.4 87 92.0
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 3.2e-35 151.4 87 92.0
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 3.2e-35 151.4 87 92.0
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 3.2e-35 151.4 87 92.0
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 3.2e-35 151.4 83 90.4
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 3.2e-35 151.4 83 91.6
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 7.2e-35 150.2 84 89.3
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 2.1e-34 148.7 88 88.6
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 2.7e-34 148.3 79 93.7
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 8.0e-34 146.7 85 89.4
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 8.0e-34 146.7 85 89.4
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 7.4e-32 140.2 92 79.3
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 9.7e-32 139.8 86 81.4
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 2.2e-31 138.7 83 83.1
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 4.8e-31 137.5 83 83.1
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 1.1e-30 136.3 72 95.8
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 5.3e-30 134.0 73 94.5
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 1.2e-29 132.9 72 93.1
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 2.6e-29 131.7 78 85.9
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 1.3e-28 129.4 85 81.2
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 1.3e-28 129.4 85 81.2
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 1.3e-28 129.4 83 80.7
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 2.2e-28 128.6 73 91.8
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 5.0e-28 127.5 83 83.1
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 5.0e-28 127.5 73 84.9
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 5.0e-28 127.5 83 79.5
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 5.0e-28 127.5 83 79.5
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 5.0e-28 127.5 83 79.5
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 8.5e-28 126.7 83 79.5
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 1.9e-27 125.6 75 82.7
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 4.2e-27 124.4 83 78.3
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 9.4e-27 123.2 93 72.0
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 2.1e-26 122.1 86 74.4
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 2.7e-26 121.7 85 76.5
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 8.5e-20 100.1 71 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 3.2e-19 98.2 76 60.5
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 3.2e-19 98.2 72 66.7
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.2e-18 96.3 83 66.3
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.8e-17 92.4 49 95.9
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 8.8e-17 90.1 64 75.0
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 4.4e-16 87.8 69 58.0
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 1.3e-15 86.3 44 93.2
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 1.6e-13 79.3 46 80.4
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 2.0e-13 79.0 70 61.4
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 6.8e-09 63.9 64 42.2
Nitab4.5_0000465g0080 Nicotiana tabacum HOM05D007087 ORTHO05D008968 6.3e-07 57.4 33 81.8


User provided reference genes

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