Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006774 Carpinus fangiana HOM05D016210 ORTHO05D001531 9.1e-53 209.9 102 100.0
Cfa006773 Carpinus fangiana HOM05D016210 ORTHO05D001531 1.7e-51 205.7 102 98.0
Cfa006772 Carpinus fangiana HOM05D016210 ORTHO05D001531 3.2e-50 201.4 102 96.1
Haze_03985 Corylus avellana HOM05D016210 ORTHO05D001531 1.8e-40 169.1 101 84.2
CiPaw.07G036500 Carya illinoinensis HOM05D016210 ORTHO05D001531 1.4e-13 79.7 118 46.6
QL03p011025 Quercus lobata HOM05D016210 ORTHO05D001531 1.1e-10 70.1 102 43.1
QL03p011084 Quercus lobata HOM05D016210 ORTHO05D001531 1.1e-10 70.1 102 44.1
QL03p011013 Quercus lobata HOM05D016210 ORTHO05D001531 5.6e-10 67.8 71 45.1
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.2e-09 66.6 90 46.7
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 3.6e-09 65.1 88 45.5
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 8.0e-09 63.9 87 48.3
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.0e-09 63.9 83 48.2
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.0e-09 63.9 83 48.2
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 1.4e-08 63.2 83 47.0
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 1.4e-08 63.2 81 46.9
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 1.8e-08 62.8 68 52.9
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 3.1e-08 62.0 77 48.1
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 3.1e-08 62.0 101 42.6
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 4.0e-08 61.6 89 46.1
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 5.2e-08 61.2 78 47.4
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.2e-08 61.2 78 47.4
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 5.2e-08 61.2 97 39.2
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.8e-08 60.8 78 47.4
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 8.9e-08 60.5 82 45.1
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.2e-07 60.1 83 45.8
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.5e-07 59.7 78 46.2
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.5e-07 59.7 78 46.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 1.5e-07 59.7 76 48.7
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.4e-07 58.5 69 49.3
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 7.5e-07 57.4 68 44.1
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.8e-07 57.0 78 46.2
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.7e-06 56.2 68 48.5
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.7e-06 56.2 65 38.5
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 2.2e-06 55.8 67 49.3
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-06 55.5 109 36.7
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-06 55.5 109 36.7
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.9e-06 55.5 109 36.7
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.7e-06 55.1 73 38.4
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 3.7e-06 55.1 76 44.7
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 4.9e-06 54.7 72 41.7
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 6.4e-06 54.3 73 38.4
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 6.4e-06 54.3 71 43.7
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 6.4e-06 54.3 72 38.9
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 8.3e-06 53.9 68 45.6
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.3e-06 53.9 79 44.3
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.3e-06 53.9 80 43.8
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 8.3e-06 53.9 72 41.7


User provided reference genes

Program Settings