Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 2.8e-134 482.3 299 100.0
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 5.0e-75 285.4 299 70.9
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 9.5e-34 148.3 177 72.3
QL03p015395 Quercus lobata HOM05D013055 ORTHO05D014149 4.9e-30 136.0 177 70.6
CiPaw.08G154700 Carya illinoinensis HOM05D013055 ORTHO05D014149 1.6e-28 131.0 177 69.5
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.3e-18 96.3 239 53.1
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 9.5e-18 95.1 188 62.8
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 5.2e-16 89.4 112 46.4
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.8e-15 85.9 182 47.8
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 1.4e-13 81.3 181 58.6
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 1.7e-11 74.3 182 48.4
Rhsim11G0096900 Rhododendron simsii HOM05D013055 ORTHO05D012930 3.9e-11 73.2 190 49.5
vmacro01576 Vaccinium macrocarpon HOM05D013055 ORTHO05D012930 6.6e-11 72.4 203 49.3
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 5.6e-10 69.3 116 39.7
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 1.6e-09 67.8 209 50.7
MD12G1204500 Malus domestica HOM05D018542 ORTHO05D014149 2.8e-09 67.0 178 54.5
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 6.2e-09 65.9 185 55.1
Atru.chr2.269 Acer truncatum HOM05D013055 ORTHO05D004310 8.1e-09 65.5 168 35.7
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 1.4e-08 64.7 186 55.9
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 1.8e-08 64.3 218 52.3
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 1.8e-08 64.3 218 52.3
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 1.8e-08 64.3 117 37.6
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 4.0e-08 63.2 177 32.2
Aqoxy2G02667 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 2.0e-07 60.8 185 56.2
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 2.6e-07 60.5 179 38.0
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.4e-07 60.1 106 35.8
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 4.4e-07 59.7 116 34.5
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 4.4e-07 59.7 116 35.3
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 5.8e-07 59.3 218 51.8
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 5.8e-07 59.3 230 50.0
DCAR_025289 Daucus carota HOM05D013055 ORTHO05D012930 9.9e-07 58.5 219 47.9
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.2e-06 57.4 187 50.8
Prupe.6G311200 Prunus persica HOM05D018542 ORTHO05D014149 2.2e-06 57.4 178 49.4
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 4.9e-06 56.2 116 34.5
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 4.9e-06 56.2 180 57.2
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 8.4e-06 55.5 183 53.0


User provided reference genes

Program Settings