Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006688 Carpinus fangiana HOM05D004767 ORTHO05D005674 1.1e-153 546.6 266 100.0
CiPaw.03G094400 Carya illinoinensis HOM05D004767 ORTHO05D005674 6.8e-108 394.4 266 74.8
Haze_03669 Corylus avellana HOM05D004767 ORTHO05D005674 5.7e-107 391.3 271 76.8
QL10p048860 Quercus lobata HOM05D004767 ORTHO05D005674 4.3e-102 375.2 266 71.4
GSVIVG01020926001 Vitis vinifera HOM05D004767 ORTHO05D005674 8.9e-100 367.5 266 70.3
Nn6g31627 Nelumbo nucifera HOM05D004767 ORTHO05D005674 1.5e-99 366.7 266 70.7
GSVIVG01017458001 Vitis vinifera HOM05D004767 ORTHO05D005674 9.8e-99 364.0 266 69.9
MD14G1063600 Malus domestica HOM05D004767 ORTHO05D005674 1.7e-98 363.2 266 68.8
RcHm_v2.0_Chr3g0480691 Rosa chinensis HOM05D004767 ORTHO05D005674 2.9e-98 362.5 266 68.8
FAN02G2069 Fragaria x ananassa HOM05D004767 ORTHO05D005674 8.3e-98 360.9 266 68.8
Sed0012135 Sechium edule HOM05D004767 ORTHO05D005674 1.1e-97 360.5 266 68.4
FAN09G1063 Fragaria x ananassa HOM05D004767 ORTHO05D005674 2.4e-97 359.4 266 68.4
Psat1g185000 Pisum sativum HOM05D004767 ORTHO05D005674 2.4e-97 359.4 269 69.1
Sed0020265 Sechium edule HOM05D004767 ORTHO05D005674 3.2e-97 359.0 266 68.0
FvH4_6g22900 Fragaria vesca HOM05D004767 ORTHO05D005674 4.1e-97 358.6 266 68.4
MD12G1063000 Malus domestica HOM05D004767 ORTHO05D005674 5.4e-97 358.2 266 68.4
Prupe.7G070600 Prunus persica HOM05D004767 ORTHO05D005674 5.4e-97 358.2 266 67.7
Glyma.10G129800 Glycine max HOM05D004767 ORTHO05D005674 9.2e-97 357.5 266 67.7
FAN14G1715 Fragaria x ananassa HOM05D004767 ORTHO05D005674 1.6e-96 356.7 266 68.0
Medtr4g077783 Medicago truncatula HOM05D004767 ORTHO05D005674 1.6e-96 356.7 269 66.9
TAR625G0043 Trochodendron aralioides HOM05D004767 ORTHO05D005674 2.7e-96 355.9 266 69.2
Lalb_Chr05g0214971 Lupinus albus HOM05D004767 ORTHO05D005674 3.5e-96 355.5 266 67.7
Medtr4g111810 Medicago truncatula HOM05D004767 ORTHO05D005674 3.5e-96 355.5 269 67.3
VMungo1127G0990 Vigna mungo HOM05D004767 ORTHO05D005674 1.0e-95 354.0 266 66.2
arahy.Tifrunner.gnm1.ann1.BE8FK9 Arachis hypogaea HOM05D004767 ORTHO05D005674 1.7e-95 353.2 266 67.3
Psat1g210160 Pisum sativum HOM05D004767 ORTHO05D005674 1.7e-95 353.2 269 67.7
TAR381G0314 Trochodendron aralioides HOM05D004767 ORTHO05D005674 1.7e-95 353.2 266 68.0
Glyma.12G025800 Glycine max HOM05D004767 ORTHO05D005674 2.3e-95 352.8 266 66.2
Potri.004G095000 Populus trichocarpa HOM05D004767 ORTHO05D005674 3.9e-95 352.1 266 66.9
Ca_02533_v3 Cicer arietinum L. HOM05D004767 ORTHO05D005674 5.0e-95 351.7 268 67.5
Lalb_Chr09g0324851 Lupinus albus HOM05D004767 ORTHO05D005674 5.0e-95 351.7 266 67.3
TPR.G18695 Trifolium pratense HOM05D004767 ORTHO05D005674 6.6e-95 351.3 270 66.7
CDE02G0197 Ceratophyllum demersum HOM05D004767 ORTHO05D005674 8.6e-95 350.9 265 65.7
CDE08G0085 Ceratophyllum demersum HOM05D004767 ORTHO05D005674 8.6e-95 350.9 265 65.7
Cc07_g12190 Coffea canephora HOM05D004767 ORTHO05D005674 8.6e-95 350.9 266 66.9
TPR.G26773 Trifolium pratense HOM05D004767 ORTHO05D005674 1.1e-94 350.5 269 66.9
Sabra17G0099100 Salix brachista HOM05D004767 ORTHO05D005674 3.3e-94 349.0 266 65.4
Hund21306 Selenicereus undatus HOM05D004767 ORTHO05D005674 4.3e-94 348.6 266 68.4
Potri.017G120100 Populus trichocarpa HOM05D004767 ORTHO05D005674 7.3e-94 347.8 266 65.4
Phvul.011G028400 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 9.5e-94 347.4 266 65.0
PGR102G1152 Punica granatum HOM05D004767 ORTHO05D005674 1.2e-93 347.1 266 67.7
Eucgr.H00074 Eucalyptus grandis HOM05D004767 ORTHO05D005674 1.4e-92 343.6 266 66.2
Oeu010411.1 Olea europaea HOM05D004767 ORTHO05D005674 2.3e-92 342.8 266 65.8
EL10Ac3g07307 Beta vulgaris HOM05D004767 ORTHO05D005674 4.0e-92 342.0 265 67.5
PSO017G2362 Papaver somniferum HOM05D004767 ORTHO05D005674 5.2e-92 341.7 266 64.7
ClCG10G013460 Citrullus lanatus HOM05D004767 ORTHO05D005674 6.8e-92 341.3 266 65.4
Lj1g0021179 Lotus japonicus HOM05D004767 ORTHO05D005674 6.8e-92 341.3 269 64.7
Manes.02G116500 Manihot esculenta HOM05D004767 ORTHO05D005674 8.9e-92 340.9 267 65.2
Aqoxy6G02991 Aquilegia oxysepala HOM05D004767 ORTHO05D005674 1.2e-91 340.5 266 64.7
Sc03g0004110 Simmondsia chinensis HOM05D004767 ORTHO05D005674 2.0e-91 339.7 267 65.5
EL10Ac8g19950 Beta vulgaris HOM05D004767 ORTHO05D005674 2.6e-91 339.3 265 66.8
SGA_v2.0_scaffold108G30887 Striga asiatica HOM05D004767 ORTHO05D005674 2.6e-91 339.3 266 65.8
MSTRG.16702 Avicennia marina HOM05D004767 ORTHO05D005674 4.4e-91 338.6 266 64.3
Nitab4.5_0000235g0120 Nicotiana tabacum HOM05D004767 ORTHO05D005674 4.4e-91 338.6 266 64.3
arahy.Tifrunner.gnm1.ann1.AK1NBZ Arachis hypogaea HOM05D004767 ORTHO05D005674 1.3e-90 337.0 266 65.4
Atru.chr5.1742 Acer truncatum HOM05D004767 ORTHO05D005674 2.9e-90 335.9 266 64.7
Nitab4.5_0006401g0010 Nicotiana tabacum HOM05D004767 ORTHO05D005674 2.9e-90 335.9 266 64.3
TWI73G0530 Tripterygium wilfordii HOM05D004767 ORTHO05D005674 2.9e-90 335.9 267 65.2
Lj4C240T4 Lonicera japonica HOM05D004767 ORTHO05D005674 3.7e-90 335.5 266 65.0
CANSAT54G2063 Cannabis sativa HOM05D004767 ORTHO05D005674 6.4e-90 334.7 266 65.4
HanXRQChr15g0489741 Helianthus annuus HOM05D004767 ORTHO05D005674 6.4e-90 334.7 266 63.2
PGSC0003DMG400003462 Solanum tuberosum HOM05D004767 ORTHO05D005674 4.1e-89 332.0 266 63.9
AUR62012542 Chenopodium quinoa HOM05D004767 ORTHO05D005674 7.0e-89 331.3 266 65.4
THA.LOC104820618 Tarenaya hassleriana HOM05D004767 ORTHO05D005674 9.2e-89 330.9 266 63.5
Peaxi162Scf00431g00415 Petunia axillaris HOM05D004767 ORTHO05D005674 2.0e-88 329.7 266 62.8
Solyc02g038750.3 Solanum lycopersicum HOM05D004767 ORTHO05D005674 3.5e-88 328.9 266 63.2
Sopen02g012180 Solanum pennellii HOM05D004767 ORTHO05D005674 4.6e-88 328.6 266 62.8
ECA233G4977 Erigeron canadensis HOM05D004767 ORTHO05D005674 6.0e-88 328.2 266 62.0
Cpa.g.sc365.7 Carica papaya HOM05D004767 ORTHO05D005674 1.0e-87 327.4 266 63.5
THA.LOC104816808 Tarenaya hassleriana HOM05D004767 ORTHO05D005674 1.3e-87 327.0 266 62.4
HPP92_003941 Vanilla planifolia HOM05D004767 ORTHO05D005674 1.7e-87 326.6 265 63.4
DCAR_019301 Daucus carota HOM05D004767 ORTHO05D005674 2.3e-87 326.2 273 61.2
Gohir.D04G022900 Gossypium hirsutum HOM05D004767 ORTHO05D005674 7.3e-86 321.2 267 64.0
Rhsim08G0026000 Rhododendron simsii HOM05D004767 ORTHO05D005674 7.3e-86 321.2 276 60.9
Aa31LG9G14020 Aethionema arabicum HOM05D004767 ORTHO05D005674 9.5e-86 320.9 266 62.8
Migut.B00408 Erythranthe guttata HOM05D004767 ORTHO05D005674 1.6e-85 320.1 256 62.5
Gorai.012G034000 Gossypium raimondii HOM05D004767 ORTHO05D005674 2.8e-85 319.3 267 63.7
Thecc.01G130700 Theobroma cacao HOM05D004767 ORTHO05D005674 4.7e-85 318.5 267 63.3
Carub.0004s1593 Capsella rubella HOM05D004767 ORTHO05D005674 8.1e-85 317.8 266 61.7
Gohir.A05G385700 Gossypium hirsutum HOM05D004767 ORTHO05D005674 1.4e-84 317.0 267 63.3
AT2G34260 Arabidopsis thaliana HOM05D004767 ORTHO05D005674 3.1e-84 315.8 266 61.7
BolC4t23059H Brassica oleracea HOM05D004767 ORTHO05D005674 4.0e-84 315.5 266 61.3
C04p14860 Brassica napus HOM05D004767 ORTHO05D005674 5.2e-84 315.1 266 61.3
Duzib264G0649 Durio zibethinus HOM05D004767 ORTHO05D005674 5.2e-84 315.1 267 62.9
BcaC02g11487 Brassica carinata HOM05D004767 ORTHO05D005674 6.8e-84 314.7 266 61.3
CARHR128360 Cardamine hirsuta HOM05D004767 ORTHO05D005674 6.8e-84 314.7 266 61.3
COL.COLO4_35713 Corchorus olitorius HOM05D004767 ORTHO05D005674 1.2e-83 313.9 266 62.8
Os07g0660700 Oryza sativa ssp. japonica HOM05D004767 ORTHO05D005674 2.6e-83 312.8 258 59.3
A05p11370 Brassica napus HOM05D004767 ORTHO05D005674 3.4e-83 312.4 266 60.9
BraA05t20086Z Brassica rapa HOM05D004767 ORTHO05D005674 3.4e-83 312.4 266 60.9
Sp4g16550 Schrenkiella parvula HOM05D004767 ORTHO05D005674 7.5e-83 311.2 266 60.2
unitig_61.g26025 Utricularia gibba HOM05D004767 ORTHO05D005674 9.9e-83 310.8 266 59.4
MELO3C026614.2 Cucumis melo HOM05D004767 ORTHO05D005674 1.3e-82 310.5 266 60.9
BcaB02g09562 Brassica carinata HOM05D004767 ORTHO05D005674 1.7e-82 310.1 266 60.2
C04p63650 Brassica napus HOM05D004767 ORTHO05D005674 2.2e-82 309.7 266 60.5
BcaB06g28745 Brassica carinata HOM05D004767 ORTHO05D005674 2.9e-82 309.3 266 59.8
BraA04t18130Z Brassica rapa HOM05D004767 ORTHO05D005674 3.7e-82 308.9 266 60.5
Lj3A907T66 Lonicera japonica HOM05D004767 ORTHO05D005674 5.4e-81 305.1 306 53.6
PSO170G0853 Papaver somniferum HOM05D004767 ORTHO05D005674 7.1e-81 304.7 266 60.2
Dinv40217 Davidia involucrata HOM05D004767 ORTHO05D005674 9.2e-81 304.3 235 67.2
vmacro18476 Vaccinium macrocarpon HOM05D004767 ORTHO05D005674 4.6e-80 302.0 266 59.4
RcHm_v2.0_Chr4g0410631 Rosa chinensis HOM05D004767 ORTHO05D005674 1.0e-79 300.8 267 61.0
Hma1.2p1_0085F.1_g044390 Hydrangea macrophylla HOM05D004767 ORTHO05D005674 4.3e-78 295.4 289 57.1
Zm00001eb349300 Zea mays HOM05D004767 ORTHO05D005674 5.6e-78 295.0 258 56.6
Lsat_1_v5_gn_8_114040 Lactuca sativa HOM05D004767 ORTHO05D005674 3.6e-77 292.4 266 57.5
TAR625G0966 Trochodendron aralioides HOM05D004767 ORTHO05D005674 2.4e-76 289.7 224 67.9
SalBow6G2358 Salvia bowleyana HOM05D004767 ORTHO05D005674 7.6e-75 284.6 274 56.9
SalBow6G5765 Salvia bowleyana HOM05D004767 ORTHO05D005674 9.9e-75 284.3 274 56.9
COL.COLO4_38041 Corchorus olitorius HOM05D004767 ORTHO05D005674 5.4e-73 278.5 224 65.2
SalBow2G0232 Salvia bowleyana HOM05D004767 ORTHO05D005674 2.7e-72 276.2 266 57.1
Thhalv10016919m.g Eutrema salsugineum HOM05D004767 ORTHO05D005674 1.3e-71 273.9 265 55.5
AagrBONN_evm.TU.Sc2ySwM_344.1647 Anthoceros agrestis HOM05D004767 ORTHO05D005674 3.9e-71 272.3 264 50.4
Mapoly0040s0029 Marchantia polymorpha HOM05D004767 ORTHO05D005674 3.3e-70 269.2 265 50.9
Actinidia28754 Actinidia chinensis HOM05D004767 ORTHO05D005674 2.8e-69 266.2 221 62.4
CsaV3_3G043180 Cucumis sativus L. HOM05D004767 ORTHO05D005674 3.6e-69 265.8 266 54.1
AL4G30210 Arabidopsis lyrata HOM05D004767 ORTHO05D005674 8.1e-69 264.6 267 54.7
Phvul.005G015600 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 4.0e-68 262.3 273 52.4
Phvul.005G015700 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 2.0e-67 260.0 273 51.6
SMO364G0336 Selaginella moellendorffii HOM05D004767 ORTHO05D005674 4.6e-64 248.8 270 48.5
CSS0049016 Camellia sinensis var. sinensis HOM05D004767 ORTHO05D005674 1.3e-63 247.3 268 52.6
Glyma.11G099900 Glycine max HOM05D004767 ORTHO05D005674 1.7e-63 246.9 266 50.8
Ah.09g236950 Amaranthus hybridus HOM05D004767 ORTHO05D005674 7.3e-62 241.5 273 52.0
AUR62014654 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.9e-57 226.9 266 51.5
AUR62044118 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.9e-57 226.9 266 51.5
A04p26260 Brassica napus HOM05D004767 ORTHO05D005674 1.6e-53 213.8 171 61.4
CBR_g37537 Chara braunii HOM05D004767 ORTHO05D005674 2.8e-53 213.0 227 46.7
Medtr1g076780 Medicago truncatula HOM05D004767 ORTHO05D005674 1.6e-48 197.2 161 63.4
MCO07G146 Micromonas commoda HOM05D004767 ORTHO05D005674 3.7e-45 186.0 265 36.2
Glyma.20G080900 Glycine max HOM05D004767 ORTHO05D005674 5.3e-44 182.2 149 65.1
ATR0680G041 Amborella trichopoda HOM05D004767 ORTHO05D005674 5.1e-39 165.6 155 53.5
PRCOL_00000722 Prasinoderma coloniale HOM05D004767 ORTHO05D005674 4.1e-36 156.0 265 36.6
Cre02.g113250 Chlamydomonas reinhardtii HOM05D004767 ORTHO05D005674 2.7e-32 143.3 216 37.5
SEGI_28078 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 7.9e-32 141.7 109 64.2
Psat6g227720 Pisum sativum HOM05D004767 ORTHO05D005674 3.9e-31 139.4 153 52.3
Psat6g227760 Pisum sativum HOM05D004767 ORTHO05D005674 5.1e-31 139.0 147 55.8
SHI13610 Sapria himalayana HOM05D004767 ORTHO05D005674 2.5e-30 136.7 202 40.6
QL07p001807 Quercus lobata HOM05D004767 ORTHO05D005674 1.1e-28 131.3 158 48.7
Pp3c5_17020 Physcomitrium patens HOM05D004767 ORTHO05D005674 1.4e-25 120.9 121 52.1
Sabra17G0099200 Salix brachista HOM05D004767 ORTHO05D005674 6.9e-20 102.1 81 64.2
SEGI_20710 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 2.1e-16 90.5 95 49.5
BolC4t27833H Brassica oleracea HOM05D004767 ORTHO05D005674 3.0e-15 86.7 208 30.8
Phvul.011G028501 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 3.0e-15 86.7 76 59.2
Oeu036465.1 Olea europaea HOM05D004767 ORTHO05D005674 2.6e-11 73.6 195 34.4
ATR0231G001 Amborella trichopoda HOM05D004767 ORTHO05D005674 4.5e-11 72.8 47 74.5
SEGI_27353 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 1.3e-10 71.2 66 50.0
Lsat_1_v5_gn_6_103760 Lactuca sativa HOM05D004767 ORTHO05D005674 1.2e-08 64.7 59 52.5
Phvul.011G028300 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 4.7e-08 62.8 50 62.0
Cc11_g01130 Coffea canephora HOM05D004767 ORTHO05D005674 1.0e-07 61.6 47 68.1
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 6.7e-07 58.9 158 28.5
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 4.4e-06 56.2 158 27.2


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