Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 2.9e-260 901.4 456 100.0
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 1.5e-208 729.6 454 81.7
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 2.3e-204 715.7 456 77.9
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 5.6e-203 711.1 456 82.0
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 3.5e-197 691.8 459 78.0
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 7.8e-197 690.6 456 76.5
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 1.7e-196 689.5 456 77.4
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 8.4e-191 670.6 456 76.3
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 3.2e-190 668.7 457 75.1
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 7.1e-190 667.5 454 74.9
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 9.3e-190 667.2 430 77.9
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 1.6e-189 666.4 453 75.9
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 6.0e-189 664.5 455 74.5
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 1.3e-188 663.3 463 74.3
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 1.2e-181 640.2 456 74.1
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 3.0e-180 635.6 456 72.6
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 3.0e-180 635.6 454 70.9
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 8.7e-180 634.0 460 71.1
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 4.3e-179 631.7 456 71.1
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 7.4e-179 630.9 457 71.8
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 9.6e-179 630.6 456 72.4
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 4.8e-178 628.2 457 72.0
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 4.8e-178 628.2 456 71.5
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 6.2e-178 627.9 456 71.3
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 5.3e-177 624.8 457 70.5
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 6.9e-177 624.4 494 68.0
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.2e-176 623.6 456 69.5
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 5.8e-176 621.3 452 73.0
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 7.6e-176 620.9 456 70.6
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 1.0e-175 620.5 442 72.4
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 3.2e-174 615.5 442 71.9
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 4.2e-174 615.1 456 68.6
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 6.0e-173 611.3 480 66.2
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 1.9e-171 606.3 453 68.2
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 5.7e-171 604.7 455 69.0
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 7.4e-171 604.4 453 69.5
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 9.7e-171 604.0 457 70.2
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 4.8e-170 601.7 454 68.1
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 8.2e-170 600.9 403 76.4
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.4e-169 600.1 457 69.8
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 4.1e-169 598.6 457 68.7
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 7.6e-168 594.3 457 68.9
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.1e-165 586.3 463 68.0
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 4.6e-165 585.1 476 65.8
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 5.1e-164 581.6 456 67.3
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 1.1e-163 580.5 456 66.7
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 7.4e-163 577.8 341 84.2
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 1.3e-162 577.0 453 66.2
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.8e-162 575.9 456 66.0
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 2.4e-161 572.8 452 65.7
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 2.6e-160 569.3 452 66.2
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.1e-158 563.9 454 65.9
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 1.1e-158 563.9 459 67.1
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 2.5e-158 562.8 452 65.7
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 1.2e-157 560.5 452 65.7
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.7e-157 559.3 455 64.6
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 2.7e-157 559.3 458 63.5
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 3.6e-157 558.9 456 64.9
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 7.9e-157 557.8 454 64.3
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 1.0e-156 557.4 455 64.4
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 2.3e-156 556.2 341 81.5
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 3.0e-156 555.8 459 64.7
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 6.7e-156 554.7 456 66.4
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 6.7e-156 554.7 464 66.8
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 8.8e-156 554.3 455 64.4
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.1e-155 553.9 388 73.7
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 1.1e-155 553.9 420 70.0
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.6e-155 552.7 394 72.6
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 4.4e-155 552.0 458 64.2
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 9.7e-155 550.8 452 64.6
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 2.8e-154 549.3 480 61.9
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.8e-154 549.3 455 64.8
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 8.2e-154 547.7 454 63.7
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.4e-153 547.0 457 64.1
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 1.4e-153 547.0 407 69.8
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 4.1e-153 545.4 471 62.4
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 5.9e-152 541.6 465 63.9
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 8.5e-151 537.7 455 64.8
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 2.5e-150 536.2 341 78.6
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 2.5e-150 536.2 375 76.0
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 9.4e-150 534.3 451 62.7
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 8.8e-148 527.7 505 58.2
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 8.8e-148 527.7 481 62.0
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 3.7e-146 522.3 340 78.2
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 1.3e-143 513.8 475 60.6
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 8.5e-143 511.1 474 60.3
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.7e-141 506.1 456 61.8
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 4.7e-141 505.4 255 97.3
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.5e-139 500.4 412 65.0
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 3.3e-139 499.2 342 72.2
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.3e-130 470.7 373 65.7
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 1.8e-129 466.8 468 55.3
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 1.6e-128 463.8 466 57.5
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 1.6e-128 463.8 465 57.2
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 1.0e-124 451.1 303 74.3
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 4.9e-122 442.2 395 60.5
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 4.1e-121 439.1 343 65.9
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 2.9e-119 433.0 366 62.8
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 6.6e-119 431.8 479 50.1
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 1.3e-111 407.5 255 75.7
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 6.2e-109 398.7 253 76.3
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 2.0e-107 393.7 466 48.9
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 4.4e-107 392.5 385 54.3
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.9e-105 387.1 360 61.9
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 8.6e-103 378.3 257 71.6
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.9e-99 364.8 416 52.6
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 3.7e-98 362.8 383 50.9
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 7.1e-97 358.6 357 50.4
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 9.2e-97 358.2 343 53.4
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 2.8e-93 346.7 358 50.3
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 4.7e-93 345.9 242 69.8
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 8.1e-93 345.1 300 62.3
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 3.6e-85 319.7 387 47.3
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 3.0e-79 300.1 457 44.6
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 9.6e-78 295.0 344 50.0
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.3e-71 273.9 393 44.3
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 3.1e-68 263.5 139 95.7
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 1.3e-58 231.5 198 65.7
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 2.5e-57 227.3 166 67.5
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.3e-55 220.7 286 45.5
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 1.9e-54 217.6 234 55.1
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 7.9e-48 195.7 248 47.6
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 2.6e-38 164.1 93 83.9
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 3.6e-32 143.7 200 46.5
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 3.9e-31 140.2 122 58.2
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 6.7e-31 139.4 388 30.9
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.4e-28 131.7 134 56.7
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.2e-24 118.6 60 85.0
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.1e-24 117.9 125 50.4
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 2.8e-21 107.5 202 33.7
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 4.2e-17 93.6 222 38.3
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 8.0e-16 89.4 73 67.1
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 4.0e-07 60.5 102 44.1


User provided reference genes

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