Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006565 Carpinus fangiana HOM05D008052 ORTHO05D010155 5.3e-84 314.3 157 100.0
Cfa006570 Carpinus fangiana HOM05D008052 ORTHO05D010155 3.0e-39 165.6 121 71.9
Haze_04211 Corylus avellana HOM05D008052 ORTHO05D010155 1.1e-38 163.7 142 63.4
QL02p094100 Quercus lobata HOM05D008052 ORTHO05D010155 1.0e-26 124.0 147 48.3
CiPaw.07G021600 Carya illinoinensis HOM05D008052 ORTHO05D010155 1.4e-23 113.6 141 49.6
Cfa012653 Carpinus fangiana HOM05D008052 ORTHO05D010155 7.5e-22 107.8 66 83.3
Manes.09G165300 Manihot esculenta HOM05D008052 ORTHO05D010155 7.7e-19 97.8 132 47.0
Sabra13G0025900 Salix brachista HOM05D008052 ORTHO05D010155 1.1e-17 94.0 145 42.8
Potri.013G024500 Populus trichocarpa HOM05D008052 ORTHO05D010155 1.9e-17 93.2 145 40.7
ClCG02G015920 Citrullus lanatus HOM05D008052 ORTHO05D010155 5.5e-17 91.7 137 39.4
MELO3C004280.2 Cucumis melo HOM05D008052 ORTHO05D010155 9.5e-17 90.9 142 39.4
TAR633G0175 Trochodendron aralioides HOM05D008052 ORTHO05D010155 1.2e-16 90.5 141 40.4
Migut.N01951 Erythranthe guttata HOM05D008052 ORTHO05D010155 1.6e-16 90.1 148 37.8
CsaV3_2G005120 Cucumis sativus L. HOM05D008052 ORTHO05D000003 3.6e-16 89.0 142 37.3
Cfa021083 Carpinus fangiana HOM05D008052 ORTHO05D010155 1.8e-15 86.7 55 78.2
Sc09g0003250 Simmondsia chinensis HOM05D008052 ORTHO05D010155 6.8e-15 84.7 144 36.8
TAR362G0883 Trochodendron aralioides HOM05D008052 ORTHO05D010155 4.4e-14 82.0 142 39.4
Haze_04214 Corylus avellana HOM05D008052 ORTHO05D010155 1.7e-13 80.1 113 51.3
Cpa.g.sc48.31 Carica papaya HOM05D008052 ORTHO05D010155 1.1e-12 77.4 131 42.0
Prupe.6G328200 Prunus persica HOM05D008052 ORTHO05D010155 1.4e-12 77.0 149 40.9
Cfa000827 Carpinus fangiana HOM05D008052 ORTHO05D010155 4.1e-12 75.5 61 60.7
PGR031G3742 Punica granatum HOM05D008052 ORTHO05D010155 4.1e-12 75.5 142 38.7
Ciclev10003106m.g Citrus clementina HOM05D008052 ORTHO05D010155 7.0e-12 74.7 129 38.8
DCAR_022183 Daucus carota HOM05D008052 ORTHO05D010155 2.7e-11 72.8 143 37.1
FAN05G1355 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.7e-11 72.8 141 37.6
FAN05G4790 Fragaria x ananassa HOM05D000001 ORTHO05D000003 2.7e-11 72.8 141 37.6
Nn4g26221 Nelumbo nucifera HOM05D008052 ORTHO05D010155 2.7e-11 72.8 151 39.1
Nitab4.5_0000743g0110 Nicotiana tabacum HOM05D008052 ORTHO05D010155 3.5e-11 72.4 142 41.5
CANSAT54G0621 Cannabis sativa HOM05D008052 ORTHO05D010155 7.8e-11 71.2 139 33.8
Sed0004902 Sechium edule HOM05D008052 ORTHO05D010155 1.7e-10 70.1 130 37.7
Thecc.05G305400 Theobroma cacao HOM05D008052 ORTHO05D010155 2.3e-10 69.7 146 36.3
Duzib106G0088 Durio zibethinus HOM05D008052 ORTHO05D010155 2.9e-10 69.3 135 35.6
Sed0020219 Sechium edule HOM05D008052 ORTHO05D010155 2.9e-10 69.3 142 33.1
Cc02_g33610 Coffea canephora HOM05D008052 ORTHO05D010155 2.5e-09 66.2 124 41.1
FAN14G3020 Fragaria x ananassa HOM05D008052 ORTHO05D010155 2.5e-09 66.2 152 36.2
FvH4_6g05580 Fragaria vesca HOM05D008052 ORTHO05D010155 7.3e-09 64.7 152 35.5
Sp2g20660 Schrenkiella parvula HOM05D008052 ORTHO05D010155 1.6e-08 63.5 144 37.5
AT5G27440 Arabidopsis thaliana HOM05D008052 ORTHO05D010155 2.1e-08 63.2 144 36.1
Nitab4.5_0004570g0050 Nicotiana tabacum HOM05D008052 ORTHO05D010155 2.1e-08 63.2 123 36.6
Atru.chr2.447 Acer truncatum HOM05D008052 ORTHO05D010155 2.8e-08 62.8 146 37.0
MSTRG.28007 Avicennia marina HOM05D008052 ORTHO05D010155 2.8e-08 62.8 126 33.3
Gohir.A11G296000 Gossypium hirsutum HOM05D008052 ORTHO05D010155 3.6e-08 62.4 148 33.1
Gohir.D11G310900 Gossypium hirsutum HOM05D008052 ORTHO05D010155 3.6e-08 62.4 148 33.1
RcHm_v2.0_Chr3g0454361 Rosa chinensis HOM05D008052 ORTHO05D010155 3.6e-08 62.4 145 37.9
Gorai.007G342900 Gossypium raimondii HOM05D008052 ORTHO05D010155 8.0e-08 61.2 148 32.4
Sopen12g003550 Solanum pennellii HOM05D008052 ORTHO05D010155 8.0e-08 61.2 123 35.0
THA.LOC104802806 Tarenaya hassleriana HOM05D008052 ORTHO05D010155 1.8e-07 60.1 144 34.7
SalBow3G2994 Salvia bowleyana HOM05D008052 ORTHO05D010155 2.3e-07 59.7 127 33.1
PGSC0003DMG400000290 Solanum tuberosum HOM05D008052 ORTHO05D010155 5.2e-07 58.5 128 35.2
TWI56G0838 Tripterygium wilfordii HOM05D008052 ORTHO05D010155 6.8e-07 58.2 142 33.1
PSO170G6008 Papaver somniferum HOM05D008052 ORTHO05D010155 2.0e-06 56.6 151 34.4
Thhalv10005402m.g Eutrema salsugineum HOM05D008052 ORTHO05D010155 3.4e-06 55.8 145 33.1
CARHR186050 Cardamine hirsuta HOM05D008052 ORTHO05D010155 5.8e-06 55.1 145 33.1


User provided reference genes

Program Settings