Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 3.2e-202 708.4 407 100.0
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 6.8e-176 620.9 520 74.2
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 4.9e-166 588.2 407 80.1
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.5e-151 540.0 410 77.8
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 3.9e-147 525.4 358 77.7
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 5.1e-147 525.0 362 78.5
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 4.8e-145 518.5 423 69.7
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.8e-144 516.5 410 68.5
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.2e-143 513.8 407 70.5
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 2.6e-143 512.7 411 68.1
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 5.8e-143 511.5 423 73.5
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.3e-142 510.4 411 68.4
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 1.7e-142 510.0 411 72.0
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 8.4e-142 507.7 414 71.5
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 2.4e-141 506.1 417 71.5
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.6e-140 503.4 413 66.3
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 2.1e-140 503.1 408 75.0
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.0e-139 500.7 406 76.1
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 2.3e-139 499.6 416 66.8
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 8.7e-139 497.7 408 66.9
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.1e-138 497.3 417 66.4
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 2.5e-138 496.1 409 67.0
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 3.3e-138 495.7 410 74.9
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.6e-137 493.4 359 73.3
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 4.8e-137 491.9 407 71.5
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.1e-136 490.7 359 73.5
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.8e-136 490.0 409 71.4
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 3.1e-136 489.2 408 66.9
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 2.6e-135 486.1 409 66.3
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.5e-135 485.3 409 66.5
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 5.8e-135 485.0 355 72.1
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 9.9e-135 484.2 427 66.5
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 9.9e-135 484.2 425 67.3
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 3.8e-134 482.3 426 64.3
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 4.9e-134 481.9 411 65.2
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 6.4e-134 481.5 409 65.5
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.4e-134 481.1 427 66.3
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.4e-133 480.3 427 64.6
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 2.5e-133 479.6 409 64.8
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 7.1e-133 478.0 409 64.3
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 9.3e-133 477.6 410 70.0
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.3e-131 473.8 427 63.2
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 5.1e-131 471.9 358 72.1
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 6.7e-131 471.5 435 61.4
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 8.7e-131 471.1 410 64.6
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.9e-130 469.9 429 62.9
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.9e-130 469.9 358 71.5
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 2.5e-130 469.5 360 70.8
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 3.3e-130 469.2 433 62.1
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.8e-129 465.3 415 64.3
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 8.2e-129 464.5 425 61.2
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.8e-128 463.4 364 69.8
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 2.4e-128 463.0 413 63.9
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 3.1e-128 462.6 358 69.8
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 5.3e-128 461.8 429 65.7
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 2.6e-127 459.5 418 66.5
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 7.6e-127 458.0 433 64.7
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 3.8e-126 455.7 438 59.8
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.4e-125 453.8 407 63.4
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.4e-125 453.8 410 64.1
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 1.9e-125 453.4 432 60.2
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 2.5e-125 453.0 362 69.1
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 3.2e-125 452.6 357 69.7
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 7.1e-125 451.4 441 59.0
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 2.1e-124 449.9 434 59.2
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.0e-123 447.6 411 64.5
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 2.3e-123 446.4 439 59.0
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 3.0e-123 446.0 437 61.1
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.9e-122 443.4 418 61.2
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.5e-122 443.0 359 67.7
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 3.3e-122 442.6 409 63.1
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.3e-122 442.2 413 61.0
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 7.4e-122 441.4 431 59.4
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 2.2e-121 439.9 342 70.2
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.8e-121 439.5 408 61.3
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 3.7e-121 439.1 427 65.3
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.7e-121 439.1 427 65.3
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.8e-121 438.7 427 65.1
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 1.1e-120 437.6 409 65.5
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.4e-120 437.2 413 60.8
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.4e-120 436.4 359 66.3
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 9.0e-120 434.5 356 67.4
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 9.0e-120 434.5 338 70.7
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.0e-119 433.3 441 59.0
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 2.9e-118 429.5 410 62.0
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 6.5e-118 428.3 407 62.2
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 2.5e-117 426.4 347 68.6
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 9.4e-117 424.5 418 60.3
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.1e-116 421.8 437 57.2
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 2.0e-114 416.8 410 59.0
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 2.5e-114 416.4 432 56.2
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 9.7e-114 414.5 432 56.0
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.8e-112 410.2 320 69.1
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 1.2e-111 407.5 336 65.8
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 6.5e-110 401.7 414 58.7
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.3e-102 377.5 408 55.9
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 5.0e-102 375.6 377 56.0
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 3.0e-99 366.3 327 65.1
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.5e-98 364.0 328 62.5
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 3.5e-95 352.8 357 57.1
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 3.2e-93 346.3 271 68.6
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 4.7e-92 342.4 336 54.5
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 2.3e-91 340.1 315 61.0
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 6.5e-86 322.0 321 62.6
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.1e-76 290.4 270 58.5
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.0e-75 286.6 339 48.7
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 5.6e-69 265.8 335 47.8
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 2.8e-68 263.5 366 43.4
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.4e-67 261.2 301 52.8
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 5.0e-62 242.7 214 60.7
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.9e-56 224.2 127 89.8
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 5.4e-56 222.6 375 38.7
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 4.1e-48 196.4 129 78.3
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 1.9e-45 187.6 203 54.2
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.9e-32 144.4 88 76.1
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.9e-25 120.6 404 26.7
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.5e-21 108.2 86 66.3
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 1.3e-20 105.1 357 27.5
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 9.0e-19 99.0 71 77.5
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 6.2e-12 76.3 329 25.5
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 1.4e-11 75.1 175 33.7
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 9.0e-11 72.4 63 57.1
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 2.0e-10 71.2 46 71.7
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 3.4e-10 70.5 46 69.6
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 2.2e-09 67.8 125 40.8
C03p06830 Brassica napus HOM05D006391 ORTHO05D007767 1.2e-07 62.0 186 30.1


User provided reference genes

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