Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 8.7e-114 413.7 214 100.0
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 4.6e-38 162.2 90 96.7
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 3.3e-36 156.0 90 91.1
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 4.3e-36 155.6 99 84.8
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 2.8e-35 152.9 99 83.8
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 2.8e-35 152.9 99 83.8
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 4.7e-35 152.1 104 80.8
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 1.4e-34 150.6 104 76.9
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 1.8e-34 150.2 102 79.4
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 2.3e-34 149.8 111 71.2
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 2.3e-34 149.8 96 83.3
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 2.3e-34 149.8 102 79.4
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 1.2e-33 147.5 118 71.2
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 1.2e-33 147.5 102 76.5
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 1.2e-33 147.5 104 77.9
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 1.2e-33 147.5 104 77.9
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 4.4e-33 145.6 102 78.4
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 7.5e-33 144.8 102 78.4
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 7.5e-33 144.8 102 77.5
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 7.5e-33 144.8 102 76.5
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 1.3e-32 144.1 90 85.6
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 1.3e-32 144.1 102 77.5
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 1.3e-32 144.1 112 69.6
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 1.3e-32 144.1 84 84.5
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 1.7e-32 143.7 90 85.6
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 1.7e-32 143.7 90 85.6
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 1.7e-32 143.7 90 85.6
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 1.7e-32 143.7 102 75.5
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.2e-32 143.3 96 78.1
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.9e-32 142.9 84 84.5
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 2.9e-32 142.9 90 84.4
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 4.9e-32 142.1 99 73.7
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 8.3e-32 141.4 102 73.5
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 8.3e-32 141.4 102 73.5
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 8.3e-32 141.4 102 73.5
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 8.3e-32 141.4 88 83.0
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 8.3e-32 141.4 92 78.3
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 1.1e-31 141.0 95 78.9
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 1.4e-31 140.6 88 83.0
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 1.4e-31 140.6 82 86.6
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 1.9e-31 140.2 88 83.0
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 2.4e-31 139.8 91 79.1
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 2.4e-31 139.8 82 86.6
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 3.2e-31 139.4 83 86.7
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 3.2e-31 139.4 85 82.4
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 4.1e-31 139.0 82 86.6
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 4.1e-31 139.0 106 69.8
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 5.4e-31 138.7 96 77.1
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 7.0e-31 138.3 89 78.7
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 7.0e-31 138.3 90 82.2
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 7.0e-31 138.3 90 82.2
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 9.2e-31 137.9 90 82.2
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 9.2e-31 137.9 88 79.5
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 1.2e-30 137.5 82 84.1
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.6e-30 137.1 85 83.5
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 1.6e-30 137.1 90 82.2
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 2.0e-30 136.7 126 65.9
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 2.0e-30 136.7 98 76.5
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 2.7e-30 136.3 83 83.1
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 2.7e-30 136.3 86 82.6
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 2.7e-30 136.3 88 79.5
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 2.7e-30 136.3 90 81.1
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 3.5e-30 136.0 88 77.3
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 4.6e-30 135.6 82 82.9
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 4.6e-30 135.6 90 80.0
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 4.6e-30 135.6 88 79.5
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 4.6e-30 135.6 82 80.5
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 6.0e-30 135.2 82 80.5
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 6.0e-30 135.2 86 79.1
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 7.8e-30 134.8 82 81.7
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 1.0e-29 134.4 113 69.0
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.0e-29 134.4 83 83.1
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 1.3e-29 134.0 82 82.9
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.3e-29 134.0 82 84.1
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 1.3e-29 134.0 96 74.0
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 1.3e-29 134.0 90 78.9
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 1.7e-29 133.7 90 78.9
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 2.3e-29 133.3 88 78.4
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 3.0e-29 132.9 95 72.6
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.9e-29 132.5 94 72.3
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 3.9e-29 132.5 90 77.8
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 5.0e-29 132.1 84 78.6
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 5.0e-29 132.1 82 79.3
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 5.0e-29 132.1 82 81.7
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 1.1e-28 131.0 88 76.1
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 1.5e-28 130.6 89 75.3
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.9e-28 130.2 94 73.4
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 1.9e-28 130.2 84 81.0
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 1.9e-28 130.2 84 81.0
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.5e-28 129.8 82 80.5
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 3.3e-28 129.4 88 72.7
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 3.3e-28 129.4 89 70.8
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 4.3e-28 129.0 87 77.0
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 9.5e-28 127.9 80 78.8
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.6e-27 127.1 82 78.0
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 4.0e-26 122.5 90 77.8
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 1.9e-23 113.6 124 54.8
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 4.1e-23 112.5 67 86.6
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.7e-21 107.1 89 65.2
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 2.3e-21 106.7 67 74.6
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 8.6e-21 104.8 85 60.0
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 1.5e-20 104.0 76 68.4
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 2.5e-20 103.2 83 67.5
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 7.3e-20 101.7 84 66.7
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 7.3e-20 101.7 100 50.0
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 9.5e-20 101.3 90 63.3
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 1.6e-19 100.5 91 64.8
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 3.8e-16 89.4 56 75.0
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 8.4e-16 88.2 59 74.6
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 4.1e-15 85.9 59 72.9
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 1.2e-14 84.3 76 67.1
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 1.6e-14 84.0 75 54.7
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 4.6e-14 82.4 59 67.8
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.3e-13 80.9 75 50.7
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 1.7e-13 80.5 65 60.0
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 3.0e-13 79.7 58 69.0
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 3.0e-13 79.7 58 69.0
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.9e-13 79.3 81 54.3
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 6.6e-13 78.6 78 62.8
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 7.3e-12 75.1 78 51.3
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 1.2e-11 74.3 73 50.7
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 8.1e-11 71.6 45 80.0
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 7.1e-07 58.5 41 68.3
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 7.1e-07 58.5 46 60.9
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 9.3e-07 58.2 41 68.3
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 9.3e-07 58.2 41 68.3
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 7.8e-06 55.1 36 66.7


User provided reference genes

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