Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 7.9e-160 567.0 277 100.0
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.5e-121 439.1 279 78.5
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 1.2e-99 367.1 386 52.8
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 5.1e-98 361.7 255 67.8
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 5.1e-98 361.7 255 67.8
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 6.6e-98 361.3 255 69.4
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 3.6e-96 355.5 261 68.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 1.4e-95 353.6 261 68.2
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 4.4e-94 348.6 255 66.7
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 3.8e-93 345.5 256 66.8
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 2.4e-92 342.8 256 65.6
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 4.2e-92 342.0 265 65.3
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 5.4e-92 341.7 256 68.0
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 9.3e-92 340.9 254 66.1
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 9.3e-92 340.9 265 65.7
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 6.0e-91 338.2 264 63.6
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 6.0e-91 338.2 271 64.6
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.7e-90 336.7 271 63.1
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 3.0e-90 335.9 268 66.0
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 3.0e-90 335.9 262 63.7
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 3.9e-90 335.5 261 64.4
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 4.9e-85 318.5 260 59.6
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.9e-84 316.6 263 60.5
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 3.2e-84 315.8 281 59.1
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 3.2e-84 315.8 260 61.2
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 5.4e-84 315.1 237 66.2
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 5.4e-84 315.1 269 61.7
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.7e-83 312.8 254 60.2
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.7e-82 310.1 264 60.2
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 2.3e-82 309.7 254 61.0
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.8e-80 302.8 261 56.7
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.8e-80 302.0 261 58.6
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 6.2e-80 301.6 254 58.7
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 4.0e-79 298.9 261 58.6
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 1.5e-78 297.0 187 74.9
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 3.4e-78 295.8 264 59.5
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 1.7e-77 293.5 261 57.9
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 4.9e-77 292.0 243 60.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 6.4e-77 291.6 261 58.2
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 7.1e-76 288.1 260 59.2
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.2e-75 287.3 258 57.4
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.6e-75 287.0 216 65.3
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 3.5e-75 285.8 291 52.9
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 4.6e-75 285.4 258 57.0
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 5.1e-74 282.0 262 54.6
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 5.1e-74 282.0 256 56.2
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 5.1e-74 282.0 314 49.7
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 9.6e-73 277.7 257 57.6
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 2.4e-71 273.1 267 54.3
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 3.1e-71 272.7 256 54.7
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 2.6e-70 269.6 264 54.5
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 2.6e-70 269.6 261 55.9
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 3.4e-70 269.2 269 54.3
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 3.4e-70 269.2 261 54.4
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 3.4e-70 269.2 256 56.6
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 3.8e-69 265.8 269 53.9
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 1.1e-68 264.2 256 53.9
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 2.5e-68 263.1 263 52.5
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.2e-68 262.7 256 55.5
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 3.2e-68 262.7 276 53.6
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 7.1e-68 261.5 279 52.0
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.2e-67 260.8 256 55.1
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 3.9e-66 255.8 232 55.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 5.1e-66 255.4 245 52.7
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 6.7e-66 255.0 256 53.9
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 8.7e-66 254.6 334 47.3
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.1e-65 254.2 255 52.2
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.5e-65 253.8 214 61.7
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.5e-65 253.1 255 52.5
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.5e-65 253.1 255 52.5
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.5e-65 253.1 255 52.5
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 3.3e-65 252.7 240 50.4
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 3.7e-64 249.2 245 53.5
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 8.2e-64 248.1 265 49.4
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 9.0e-63 244.6 263 50.6
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 9.0e-63 244.6 268 51.9
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 5.9e-62 241.9 177 65.5
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 3.8e-61 239.2 264 50.4
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 3.8e-61 239.2 198 62.6
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 9.3e-60 234.6 288 46.2
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 8.7e-58 228.0 244 51.2
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 4.3e-57 225.7 181 61.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 9.7e-57 224.6 257 50.6
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 7.7e-54 214.9 112 92.0
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 7.7e-54 214.9 265 44.9
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.0e-53 214.5 251 47.0
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.7e-53 213.8 219 52.5
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.9e-52 210.3 255 48.6
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 3.9e-50 202.6 255 47.5
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 4.5e-46 189.1 280 45.7
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.3e-45 187.6 141 64.5
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 5.5e-44 182.2 246 41.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.6e-35 154.1 164 51.8
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.9e-28 130.6 204 43.6
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.2e-25 121.3 280 33.9
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.5e-25 120.9 216 40.3
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 1.1e-23 114.8 247 33.2
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.4e-23 113.6 265 32.8
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 2.0e-22 110.5 200 32.0
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 5.2e-18 95.9 135 40.0
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 8.8e-18 95.1 169 36.7
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 5.7e-17 92.4 252 31.0
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.7e-14 83.6 82 50.0
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 7.7e-14 82.0 123 39.8
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 5.9e-06 55.8 40 65.0


User provided reference genes

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