Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006139 Carpinus fangiana HOM05D007872 ORTHO05D009937 5.4e-134 481.1 260 100.0
Haze_04711 Corylus avellana HOM05D007872 ORTHO05D009937 8.4e-111 404.1 316 75.0
CiPaw.07G091500 Carya illinoinensis HOM05D007872 ORTHO05D009937 3.4e-56 222.6 231 59.3
QL12p021900 Quercus lobata HOM05D007872 ORTHO05D009937 7.0e-49 198.4 311 46.6
ClCG07G000250 Citrullus lanatus HOM05D007872 ORTHO05D009937 1.7e-47 193.7 231 49.8
Thecc.01G279500 Theobroma cacao HOM05D007872 ORTHO05D009937 8.5e-39 164.9 214 47.2
MD11G1285300 Malus domestica HOM05D007872 ORTHO05D009937 1.9e-38 163.7 244 45.1
Duzib138G0833 Durio zibethinus HOM05D007872 ORTHO05D009937 7.2e-38 161.8 230 44.8
GSVIVG01011084001 Vitis vinifera HOM05D007872 ORTHO05D009937 3.6e-37 159.5 257 40.5
Gorai.007G136800 Gossypium raimondii HOM05D007872 ORTHO05D009937 1.0e-36 157.9 275 39.3
Gohir.D11G127900 Gossypium hirsutum HOM05D007872 ORTHO05D009937 2.3e-36 156.8 275 38.9
Gohir.A11G122600 Gossypium hirsutum HOM05D007872 ORTHO05D009937 1.2e-35 154.5 233 40.8
Atru.chr5.1435 Acer truncatum HOM05D007872 ORTHO05D009937 7.5e-35 151.8 215 46.0
Dinv32936 Davidia involucrata HOM05D007872 ORTHO05D009937 1.1e-33 147.9 256 42.2
TAR636G2863 Trochodendron aralioides HOM05D007872 ORTHO05D009937 2.0e-32 143.7 253 41.5
Actinidia09132 Actinidia chinensis HOM05D007872 ORTHO05D009937 3.5e-32 142.9 276 39.9
Ciclev10021692m.g Citrus clementina HOM05D007872 ORTHO05D009937 5.9e-32 142.1 249 42.2
Hma1.2p1_0257F.1_g103430 Hydrangea macrophylla HOM05D007872 ORTHO05D009937 6.5e-31 138.7 254 39.0
Actinidia00751 Actinidia chinensis HOM05D007872 ORTHO05D009937 1.1e-30 137.9 251 39.8
Prupe.8G241200 Prunus persica HOM05D007872 ORTHO05D009937 5.5e-30 135.6 221 42.5
Sed0020585 Sechium edule HOM05D007872 ORTHO05D009937 2.1e-29 133.7 232 40.5
ClCG09G007050 Citrullus lanatus HOM05D007872 ORTHO05D009937 4.7e-29 132.5 263 38.4
Sed0027392 Sechium edule HOM05D007872 ORTHO05D009937 2.3e-28 130.2 269 37.5
Potri.002G053200 Populus trichocarpa HOM05D007872 ORTHO05D009937 3.0e-28 129.8 241 40.2
Prupe.2G108100 Prunus persica HOM05D007872 ORTHO05D009937 6.8e-28 128.6 259 39.8
Eucgr.H01481 Eucalyptus grandis HOM05D007872 ORTHO05D009937 1.5e-27 127.5 228 39.5
Manes.01G207800 Manihot esculenta HOM05D007872 ORTHO05D009937 5.7e-27 125.6 270 38.5
Sabra02G0043300 Salix brachista HOM05D007872 ORTHO05D009937 2.2e-26 123.6 240 39.6
MELO3C015834.2 Cucumis melo HOM05D007872 ORTHO05D009937 1.2e-24 117.9 252 36.1
Sabra05G0159400 Salix brachista HOM05D007872 ORTHO05D009937 1.2e-24 117.9 209 40.7
COL.COLO4_09098 Corchorus olitorius HOM05D007872 ORTHO05D009937 3.5e-24 116.3 267 36.0
MD07G1082500 Malus domestica HOM05D007872 ORTHO05D009937 7.8e-24 115.2 264 34.5
Sed0010054 Sechium edule HOM05D007872 ORTHO05D009937 1.3e-23 114.4 261 37.2
Phvul.001G150900 Phaseolus vulgaris HOM05D007872 ORTHO05D009937 5.6e-22 109.0 258 34.9
Nn4g26249 Nelumbo nucifera HOM05D007872 ORTHO05D009937 1.2e-21 107.8 242 35.5
RcHm_v2.0_Chr6g0291061 Rosa chinensis HOM05D007872 ORTHO05D009937 1.2e-21 107.8 255 32.5
Glyma.19G155900 Glycine max HOM05D007872 ORTHO05D009937 2.1e-21 107.1 237 39.2
Aqoxy2G03330 Aquilegia oxysepala HOM05D007872 ORTHO05D009937 2.8e-21 106.7 277 33.2
Nn1g02225 Nelumbo nucifera HOM05D007872 ORTHO05D009937 6.1e-21 105.5 240 33.3
VMungo1383G2390 Vigna mungo HOM05D007872 ORTHO05D009937 1.4e-20 104.4 250 34.0
Rhsim13G0024700 Rhododendron simsii HOM05D007872 ORTHO05D009937 2.6e-19 100.1 222 37.8
Lalb_Chr01g0020171 Lupinus albus HOM05D007872 ORTHO05D009937 4.4e-19 99.4 288 31.9
FAN20G0751 Fragaria x ananassa HOM05D007872 ORTHO05D009937 1.7e-18 97.4 226 35.0
Manes.05G076300 Manihot esculenta HOM05D007872 ORTHO05D009937 6.4e-18 95.5 208 38.0
Dinv34750 Davidia involucrata HOM05D007872 ORTHO05D009937 8.3e-18 95.1 204 38.7
FvH4_2g23590 Fragaria vesca HOM05D007872 ORTHO05D009937 8.3e-18 95.1 222 34.2
FAN24G1414 Fragaria x ananassa HOM05D007872 ORTHO05D009937 8.3e-18 95.1 222 34.2
FAN27G2143 Fragaria x ananassa HOM05D007872 ORTHO05D009937 3.2e-17 93.2 226 34.1
Lj1g0016134 Lotus japonicus HOM05D007872 ORTHO05D009937 9.2e-17 91.7 268 33.6
Sed0014848 Sechium edule HOM05D007872 ORTHO05D009937 9.2e-17 91.7 184 37.0
Ca_08581_v3 Cicer arietinum L. HOM05D007872 ORTHO05D009937 1.2e-16 91.3 164 40.2
arahy.Tifrunner.gnm1.ann1.DRZ1BY Arachis hypogaea HOM05D007872 ORTHO05D009937 2.7e-16 90.1 302 35.1
Cc01_g19490 Coffea canephora HOM05D007872 ORTHO05D009937 7.8e-16 88.6 121 44.6
CsaV3_7G028120 Cucumis sativus L. HOM05D007872 ORTHO05D009937 7.8e-16 88.6 198 35.9
arahy.Tifrunner.gnm1.ann1.KH7FSY Arachis hypogaea HOM05D007872 ORTHO05D009937 2.3e-15 87.0 310 33.5
TWI59G1160 Tripterygium wilfordii HOM05D007872 ORTHO05D009937 2.5e-14 83.6 265 28.7
DCAR_002735 Daucus carota HOM05D007872 ORTHO05D009937 2.1e-13 80.5 241 31.5
Migut.N02058 Erythranthe guttata HOM05D007872 ORTHO05D009937 4.7e-13 79.3 275 29.5
DCAR_012474 Daucus carota HOM05D007872 ORTHO05D009937 6.2e-13 79.0 174 37.4
PGR119G2035 Punica granatum HOM05D007872 ORTHO05D009937 6.2e-13 79.0 219 31.5
Migut.O00823 Erythranthe guttata HOM05D007872 ORTHO05D009937 8.0e-13 78.6 250 30.0
MSTRG.12565 Avicennia marina HOM05D007872 ORTHO05D009937 1.8e-12 77.4 255 29.4
Hund17992 Selenicereus undatus HOM05D007872 ORTHO05D009937 4.0e-12 76.3 203 31.5
Glyma.03G153500 Glycine max HOM05D007872 ORTHO05D009937 6.8e-12 75.5 102 48.0
TPR.G9919 Trifolium pratense HOM05D007872 ORTHO05D009937 6.8e-12 75.5 296 27.4
ATR0626G213 Amborella trichopoda HOM05D007872 ORTHO05D009937 8.9e-12 75.1 182 33.5
Migut.O00518 Erythranthe guttata HOM05D007872 ORTHO05D009937 1.3e-10 71.2 146 36.3
TWI14G0316 Tripterygium wilfordii HOM05D007872 ORTHO05D009937 2.4e-09 67.0 173 31.8
FAN15G1096 Fragaria x ananassa HOM05D007872 ORTHO05D009937 1.6e-08 64.3 82 39.0
Cpa.g.sc131.13 Carica papaya HOM05D007872 ORTHO05D009937 1.0e-07 61.6 263 27.4
Medtr7g094840 Medicago truncatula HOM05D007872 ORTHO05D009937 1.7e-07 60.8 150 31.3
Oeu015973.1 Olea europaea HOM05D007872 ORTHO05D009937 2.5e-06 57.0 132 31.1
PSO675G1448 Papaver somniferum HOM05D039644 ORTHO05D037270 3.3e-06 56.6 167 27.5
Sc05g0004970 Simmondsia chinensis HOM05D007872 ORTHO05D009937 3.3e-06 56.6 238 26.5


User provided reference genes

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