Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.9e-116 422.5 214 100.0
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 6.2e-104 380.9 208 95.2
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.3e-90 336.7 219 79.9
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.3e-88 330.1 220 78.2
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.2e-80 302.8 234 69.7
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 2.4e-79 299.3 221 70.6
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 5.3e-79 298.1 222 71.2
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 9.1e-79 297.4 219 71.2
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 2.0e-78 296.2 224 69.2
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 3.4e-78 295.4 229 69.9
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 1.0e-77 293.9 223 71.7
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 2.2e-77 292.7 224 70.5
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 6.5e-77 291.2 218 72.9
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.5e-76 289.3 223 70.0
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 4.2e-76 288.5 217 67.7
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 5.5e-76 288.1 227 65.6
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 7.2e-76 287.7 200 75.0
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 9.4e-76 287.3 190 74.7
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.1e-75 286.2 227 65.2
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.6e-75 285.4 237 63.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 3.6e-75 285.4 228 68.4
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 4.7e-75 285.0 231 65.8
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 7.9e-75 284.3 231 66.7
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.0e-74 283.9 237 62.9
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.0e-74 283.9 238 66.4
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.0e-74 283.9 224 66.5
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 1.4e-74 283.5 222 68.5
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 1.8e-74 283.1 220 68.6
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 3.0e-74 282.3 226 69.5
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 3.9e-74 282.0 223 66.4
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 5.1e-74 281.6 224 69.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 8.8e-74 280.8 221 69.7
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 2.6e-73 279.3 224 68.8
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 4.4e-73 278.5 220 67.7
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 5.7e-73 278.1 183 77.0
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 9.7e-73 277.3 145 89.7
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.7e-72 276.6 155 87.1
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 6.3e-72 274.6 170 79.4
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 6.3e-72 274.6 238 64.3
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 1.4e-71 273.5 218 66.5
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 1.4e-71 273.5 207 69.6
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 3.1e-71 272.3 216 67.1
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 4.1e-71 271.9 218 65.6
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 4.1e-71 271.9 218 70.2
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 5.3e-71 271.6 215 67.4
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 7.0e-71 271.2 223 66.4
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 9.1e-71 270.8 220 67.7
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 2.0e-70 269.6 182 72.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.6e-70 269.2 223 64.6
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.5e-70 268.9 210 67.6
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 3.5e-70 268.9 226 64.6
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 5.9e-70 268.1 225 64.9
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.7e-69 266.5 222 66.2
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 5.0e-69 265.0 226 65.5
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 6.5e-69 264.6 214 65.0
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.1e-68 263.8 228 62.7
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.5e-68 263.5 169 79.3
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.5e-68 263.5 180 72.2
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 1.9e-68 263.1 243 60.5
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 2.5e-68 262.7 173 76.3
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 2.5e-68 262.7 217 67.3
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 3.2e-68 262.3 204 69.6
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 5.5e-68 261.5 228 62.3
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 5.5e-68 261.5 180 71.7
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 5.5e-68 261.5 150 82.0
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.6e-67 260.0 227 63.4
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.6e-67 260.0 175 74.9
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.7e-67 259.2 226 61.9
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 3.6e-67 258.8 240 62.1
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 1.0e-66 257.3 210 63.8
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.0e-66 257.3 202 65.3
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.0e-66 257.3 207 64.3
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.0e-66 257.3 220 65.0
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 1.4e-66 256.9 195 66.2
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.4e-66 256.9 212 64.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 1.8e-66 256.5 190 68.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 1.8e-66 256.5 190 68.9
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 2.3e-66 256.1 212 64.2
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.3e-66 256.1 212 65.1
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.0e-66 255.8 208 64.9
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 3.0e-66 255.8 191 67.0
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 4.0e-66 255.4 211 64.5
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 4.4e-65 251.9 143 81.1
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 9.7e-65 250.8 216 63.4
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.2e-64 249.6 137 84.7
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.8e-63 246.5 208 66.3
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.4e-63 246.1 133 87.2
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 1.2e-62 243.8 198 64.6
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.2e-61 239.6 129 86.8
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.5e-60 236.9 196 64.8
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.5e-60 236.9 159 70.4
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 4.2e-60 235.3 195 63.1
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 3.0e-58 229.2 160 70.6
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.2e-57 227.3 177 62.1
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 6.1e-51 204.9 168 62.5
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 9.2e-47 191.0 98 88.8
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 3.8e-45 185.7 89 94.4
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.0e-41 173.3 214 51.9
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 3.4e-41 172.6 130 61.5
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 9.8e-41 171.0 158 52.5
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 1.1e-39 167.5 188 54.3
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.0e-38 163.3 162 56.2
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 8.6e-37 157.9 136 59.6
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.1e-35 153.3 75 90.7
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 5.2e-34 148.7 139 56.1
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.0e-33 146.7 153 54.9
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 3.4e-33 146.0 123 61.8
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 4.9e-32 142.1 84 81.0
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.1e-31 141.0 147 55.8
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.2e-30 137.5 79 87.3
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 7.8e-30 134.8 72 88.9
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.8e-26 123.6 68 82.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.1e-23 112.5 56 91.1


User provided reference genes

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