Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 6.0e-76 287.3 137 100.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 9.6e-66 253.4 137 86.9
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 3.8e-62 241.5 136 85.3
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.2e-55 219.9 137 76.6
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.6e-55 218.8 136 77.2
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 5.8e-55 217.6 136 76.5
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.0e-54 216.9 136 75.7
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.3e-54 216.5 136 75.7
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.7e-54 216.1 137 73.7
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.7e-54 216.1 135 74.8
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.7e-54 216.1 138 76.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.9e-54 215.3 136 75.7
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.9e-54 215.3 136 75.7
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 3.8e-54 214.9 135 76.3
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 3.8e-54 214.9 135 76.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.9e-54 214.5 136 75.7
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.4e-53 213.0 135 75.6
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.4e-53 213.0 138 75.4
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.4e-53 213.0 133 77.4
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 3.2e-53 211.8 135 75.6
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.5e-53 211.1 136 76.5
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 7.1e-53 210.7 139 71.9
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 9.3e-53 210.3 132 75.8
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 9.3e-53 210.3 138 73.9
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 9.3e-53 210.3 136 75.0
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.7e-52 208.8 138 73.2
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 2.7e-52 208.8 138 73.2
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 3.5e-52 208.4 137 73.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.5e-52 208.4 141 71.6
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 3.5e-52 208.4 137 73.0
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 6.0e-52 207.6 138 71.7
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 7.9e-52 207.2 138 72.5
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 7.9e-52 207.2 133 75.2
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.0e-51 206.8 136 71.3
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.3e-51 206.5 138 71.7
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.8e-51 206.1 136 73.5
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 8.7e-51 203.8 136 70.6
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.1e-50 203.4 141 71.6
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.1e-50 203.4 133 74.4
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.9e-50 202.6 131 74.0
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 3.3e-50 201.8 138 70.3
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.3e-50 201.8 136 72.1
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 3.3e-50 201.8 139 70.5
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 4.3e-50 201.4 137 70.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 4.3e-50 201.4 137 70.1
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 4.3e-50 201.4 136 69.9
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 5.7e-50 201.1 138 72.5
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 7.4e-50 200.7 135 71.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.3e-49 199.9 138 71.7
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.3e-49 199.9 138 69.6
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.3e-49 199.9 138 70.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.3e-49 199.9 136 69.9
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.3e-49 199.9 134 71.6
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.6e-49 199.5 136 69.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.2e-49 199.1 140 69.3
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 2.8e-49 198.7 138 71.7
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.7e-49 198.4 138 68.8
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 6.3e-49 197.6 142 69.7
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 8.2e-49 197.2 136 67.6
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 8.2e-49 197.2 136 69.9
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 1.1e-48 196.8 138 69.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.4e-48 196.4 135 70.4
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.4e-48 196.4 135 70.4
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 2.4e-48 195.7 138 69.6
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 6.9e-48 194.1 136 66.9
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 6.9e-48 194.1 136 71.3
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.2e-47 193.4 134 67.9
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.0e-47 192.6 135 65.2
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.0e-47 192.6 133 69.9
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.4e-47 191.8 118 76.3
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 5.9e-47 191.0 118 76.3
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.0e-46 190.3 139 69.1
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.5e-45 185.7 127 69.3
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.5e-45 185.7 127 69.3
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 4.2e-45 184.9 131 67.9
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 7.2e-45 184.1 118 75.4
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 7.2e-45 184.1 118 75.4
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 9.4e-45 183.7 131 67.9
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 9.4e-45 183.7 136 64.7
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 9.4e-45 183.7 136 64.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 9.4e-45 183.7 136 64.7
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.2e-44 183.3 128 70.3
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 2.7e-44 182.2 136 64.0
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 2.7e-44 182.2 106 79.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.0e-43 180.3 136 63.2
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.8e-43 179.5 139 63.3
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.3e-43 179.1 135 63.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.0e-43 178.7 136 63.2
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 3.0e-43 178.7 136 64.7
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.0e-43 178.7 124 69.4
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.9e-43 178.3 134 65.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.1e-42 176.8 138 63.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.1e-42 176.8 140 62.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.5e-42 176.4 136 64.0
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.0e-42 176.0 139 58.3
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 5.7e-42 174.5 139 61.9
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.3e-41 173.3 139 63.3
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 2.8e-41 172.2 136 62.5
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 2.8e-41 172.2 139 61.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.8e-41 172.2 138 61.6
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 4.8e-41 171.4 133 63.2
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 6.3e-41 171.0 116 73.3
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 8.2e-41 170.6 139 61.2
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 8.2e-41 170.6 139 61.2
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 4.1e-40 168.3 139 60.4
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.9e-40 167.5 129 65.1
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.2e-39 166.8 110 72.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 2.6e-39 165.6 130 63.1
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.6e-39 165.6 138 60.9
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 5.9e-39 164.5 119 66.4
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.3e-38 163.3 134 60.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 3.2e-37 158.7 136 56.6
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.6e-36 156.4 109 67.9
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 8.8e-35 150.6 136 55.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.2e-33 146.0 111 64.9
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.7e-33 145.2 119 54.6
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 8.2e-33 144.1 119 54.6
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.4e-32 143.3 117 53.0
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 4.1e-32 141.7 95 70.5
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.1e-32 141.7 121 53.7
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 5.3e-32 141.4 130 49.2
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 4.5e-31 138.3 92 69.6
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.3e-30 136.7 115 53.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.1e-28 129.4 86 69.8
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 1.8e-27 126.3 108 56.5
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 5.2e-27 124.8 123 46.3
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.7e-25 119.8 82 65.9
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 2.9e-22 109.0 85 60.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.3e-17 93.6 90 54.4
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.7e-15 85.9 87 52.9
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.1e-13 80.5 53 67.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.1e-08 63.9 43 67.4


User provided reference genes

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