Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 1.4e-231 805.8 386 100.0
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.3e-221 772.7 417 91.1
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 2.1e-198 695.7 395 83.8
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 3.9e-189 664.8 389 82.0
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 1.4e-186 656.4 395 80.5
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 5.1e-181 637.9 389 76.3
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.1e-180 636.7 389 77.1
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 2.1e-179 632.5 389 76.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.4e-178 629.8 388 77.3
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 5.3e-178 627.9 389 76.1
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 6.5e-176 620.9 394 75.1
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 4.2e-175 618.2 390 74.9
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 7.1e-175 617.5 391 74.4
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.9e-173 611.7 394 74.1
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 5.1e-173 611.3 393 73.3
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 6.7e-173 610.9 389 74.6
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.1e-172 610.1 389 74.3
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.9e-172 609.4 390 73.6
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 5.7e-172 607.8 394 72.6
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 9.6e-172 607.1 390 73.3
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.6e-171 606.3 389 74.6
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-171 606.3 380 73.7
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.6e-171 606.3 380 73.7
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 2.1e-171 605.9 393 72.8
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 8.2e-171 604.0 388 73.5
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.4e-170 603.2 393 73.0
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 2.4e-170 602.4 389 73.0
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 5.9e-169 597.8 392 71.4
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 1.7e-168 596.3 392 70.9
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 5.0e-168 594.7 393 72.5
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.1e-167 593.6 385 71.9
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.4e-167 593.2 395 71.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 5.5e-167 591.3 391 71.9
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 2.1e-166 589.3 390 71.8
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 6.1e-166 587.8 390 73.1
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.3e-165 586.6 395 71.4
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 3.3e-164 582.0 389 72.0
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 2.8e-163 578.9 393 69.2
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 4.8e-163 578.2 391 69.8
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 8.2e-163 577.4 443 64.3
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.4e-162 576.6 389 72.0
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.2e-161 573.5 386 70.5
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 2.0e-161 572.8 387 71.3
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 3.4e-161 572.0 391 70.3
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 7.7e-161 570.9 341 77.1
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.1e-158 562.8 389 69.7
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 4.6e-158 561.6 340 79.4
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 7.9e-158 560.8 390 69.0
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.0e-157 560.5 391 67.8
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 2.3e-157 559.3 394 68.0
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 3.0e-157 558.9 387 68.7
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 5.1e-157 558.1 385 68.6
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 8.8e-157 557.4 391 68.0
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.5e-156 556.6 385 68.8
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 1.5e-156 556.6 387 68.7
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 5.7e-156 554.7 391 69.1
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 5.7e-156 554.7 391 67.5
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 3.7e-155 552.0 385 68.3
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.4e-154 550.1 418 65.8
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 3.1e-154 548.9 392 67.3
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 9.1e-154 547.4 379 70.4
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 4.5e-153 545.0 401 67.3
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.2e-152 542.7 391 68.5
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 2.9e-152 542.3 396 65.2
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 8.5e-152 540.8 388 68.0
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.2e-150 537.0 386 66.8
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 1.0e-149 533.9 374 68.2
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.0e-149 533.9 392 66.3
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.0e-149 532.3 389 66.6
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 3.9e-149 531.9 387 66.4
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 1.1e-148 530.4 442 59.7
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 7.4e-148 527.7 391 65.5
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 4.8e-147 525.0 316 77.5
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 5.3e-146 521.5 367 67.8
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 7.0e-146 521.2 386 66.6
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.6e-145 520.0 393 65.6
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.0e-145 519.6 394 64.2
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.3e-144 516.9 387 64.1
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.3e-144 516.9 391 63.9
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 1.5e-143 513.5 386 62.7
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.6e-142 510.0 389 63.2
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 2.1e-142 509.6 391 63.2
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 2.7e-142 509.2 391 65.2
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 4.7e-142 508.4 390 62.8
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.2e-140 503.8 393 64.1
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 4.4e-140 501.9 390 63.3
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 7.5e-140 501.1 397 61.0
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.8e-139 499.2 390 63.1
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.8e-139 499.2 342 68.1
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 2.4e-138 496.1 407 61.2
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 5.3e-138 495.0 388 63.1
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 1.2e-137 493.8 387 61.2
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.5e-137 492.3 389 63.5
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.3e-136 490.3 394 62.7
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.7e-136 490.0 397 62.0
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 8.5e-136 487.6 427 59.5
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 3.2e-135 485.7 386 62.4
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.2e-135 485.7 419 58.5
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 4.2e-135 485.3 386 62.4
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 1.6e-134 483.4 387 63.0
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 2.3e-133 479.6 388 62.9
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 4.5e-129 465.3 368 59.0
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 1.0e-128 464.2 385 60.0
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.2e-126 457.2 340 65.9
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 7.0e-122 441.4 380 56.3
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.1e-119 434.1 301 66.1
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 1.5e-116 423.7 268 76.5
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 2.0e-113 413.3 279 71.0
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 4.1e-106 389.0 233 78.1
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 4.4e-92 342.4 384 46.9
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 9.9e-92 341.3 385 47.0
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 6.4e-91 338.6 275 60.7
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 9.2e-90 334.7 377 45.4
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.9e-87 327.0 343 49.3
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 1.9e-82 310.5 198 72.7
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 6.2e-78 295.4 268 54.5
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.2e-76 291.2 298 48.7
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 6.2e-70 268.9 316 47.2
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.7e-67 260.8 203 57.6
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.8e-64 250.8 172 72.7
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 8.7e-64 248.4 253 47.4
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 8.7e-56 221.9 152 67.1
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 2.4e-53 213.8 190 56.8
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 6.9e-53 212.2 354 37.3
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 6.7e-48 195.7 139 71.9
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 2.3e-40 170.6 123 69.9
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 1.1e-37 161.8 342 33.3
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 1.6e-33 147.9 323 32.8
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.0e-31 141.0 177 45.8
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 5.9e-28 129.4 148 45.3
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.9e-20 102.8 171 36.8
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-14 85.1 137 34.3
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 3.5e-12 77.0 45 86.7
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-11 75.1 69 47.8
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 2.6e-07 60.8 68 48.5


User provided reference genes

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