Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 1.6e-49 199.1 105 100.0
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.2e-47 193.0 105 97.1
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 7.7e-39 163.7 105 81.9
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.8e-35 152.5 102 76.5
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.8e-35 152.5 100 79.0
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 1.8e-35 152.5 101 77.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.5e-34 149.4 81 97.5
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.7e-34 147.5 94 79.8
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 7.4e-34 147.1 98 74.5
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 9.7e-34 146.7 103 70.9
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 1.3e-33 146.4 98 76.5
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.7e-33 146.0 101 74.3
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.7e-33 146.0 95 78.9
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.2e-33 145.6 101 75.2
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 2.2e-33 145.6 99 72.7
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 3.7e-33 144.8 102 74.5
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 4.8e-33 144.4 103 73.8
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 4.8e-33 144.4 102 72.5
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 6.3e-33 144.1 101 73.3
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 8.2e-33 143.7 105 71.4
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.1e-32 143.3 98 73.5
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 1.4e-32 142.9 102 69.6
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.4e-32 142.9 98 71.4
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.8e-32 142.5 102 71.6
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.8e-32 142.5 102 70.6
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 70.6
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.4e-32 142.1 98 73.5
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.1e-32 141.7 98 74.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 4.1e-32 141.4 102 70.6
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 4.1e-32 141.4 102 74.5
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 4.1e-32 141.4 102 74.5
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 4.1e-32 141.4 94 75.5
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 5.3e-32 141.0 98 72.4
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 5.3e-32 141.0 98 69.4
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 5.3e-32 141.0 102 71.6
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 70.6
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 70.6
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 9.1e-32 140.2 102 73.5
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 9.1e-32 140.2 103 70.9
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 69.6
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 73.5
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 1.2e-31 139.8 98 72.4
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.6e-31 139.4 99 74.7
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 2.0e-31 139.0 98 74.5
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 2.0e-31 139.0 98 67.3
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 2.0e-31 139.0 103 68.0
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 3.5e-31 138.3 99 70.7
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.5e-31 138.3 98 71.4
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 7.7e-31 137.1 100 69.0
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 7.7e-31 137.1 102 69.6
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 1.0e-30 136.7 97 72.2
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 1.3e-30 136.3 102 65.7
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.7e-30 136.0 102 69.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 2.2e-30 135.6 98 69.4
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 2.9e-30 135.2 102 63.7
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 3.8e-30 134.8 101 66.3
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 5.0e-30 134.4 102 63.7
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 5.0e-30 134.4 103 67.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 6.5e-30 134.0 102 66.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 6.5e-30 134.0 102 65.7
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 1.1e-29 133.3 97 66.0
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 1.1e-29 133.3 102 65.7
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.1e-29 133.3 103 65.0
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.1e-29 133.3 100 70.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 64.7
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 64.7
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 64.7
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 64.7
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 1.5e-29 132.9 97 70.1
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.5e-29 132.9 103 68.0
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 2.5e-29 132.1 98 68.4
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 3.2e-29 131.7 102 64.7
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 4.2e-29 131.3 99 68.7
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 4.2e-29 131.3 99 68.7
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 7.2e-29 130.6 97 68.0
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 7.2e-29 130.6 98 66.3
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 7.2e-29 130.6 99 67.7
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 7.2e-29 130.6 102 62.7
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.2e-28 129.8 101 64.4
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.6e-28 129.4 102 63.7
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 2.7e-28 128.6 103 62.1
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 2.7e-28 128.6 103 62.1
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.7e-28 128.6 103 65.0
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 3.6e-28 128.3 99 66.7
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 4.7e-28 127.9 102 62.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 4.7e-28 127.9 113 64.6
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.4e-27 126.3 102 60.8
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.4e-27 126.3 103 65.0
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 4.0e-27 124.8 99 64.6
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 4.0e-27 124.8 99 64.6
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 8.8e-27 123.6 103 63.1
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-26 123.2 103 63.1
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.1e-26 123.2 99 63.6
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 1.5e-26 122.9 98 64.3
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 2.2e-25 119.0 101 61.4
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 2.8e-25 118.6 100 63.0
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 6.3e-25 117.5 97 64.9
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 2.4e-24 115.5 76 78.9
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 4.5e-23 111.3 94 58.5
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 4.5e-23 111.3 149 47.0
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 5.9e-23 110.9 94 59.6
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.0e-22 110.2 80 72.5
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.3e-22 109.8 80 71.2
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.3e-22 109.8 84 67.9
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.9e-22 108.6 98 60.2
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.0e-22 107.8 82 68.3
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 6.5e-22 107.5 99 54.5
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.5e-21 106.3 80 67.5
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.9e-21 105.9 80 67.5
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 2.5e-21 105.5 101 55.4
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 6.1e-20 100.9 101 54.5
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.2e-18 96.7 81 59.3
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.5e-18 96.3 76 60.5
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 3.4e-18 95.1 80 61.2
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 3.4e-18 95.1 78 62.8
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 4.4e-18 94.7 77 68.8
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 5.7e-18 94.4 90 55.6
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 7.5e-18 94.0 79 62.0
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 8.3e-17 90.5 72 62.5
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 3.5e-15 85.1 99 48.5
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 5.9e-15 84.3 93 48.4
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.8e-11 72.8 54 68.5
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 5.2e-11 71.2 50 64.0
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 5.2e-11 71.2 50 64.0
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 1.6e-07 59.7 89 37.1
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 4.5e-07 58.2 50 54.0
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.3e-06 56.6 102 36.3


User provided reference genes

Program Settings