Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005843 Carpinus fangiana HOM05D007468 ORTHO05D009051 1.9e-90 335.9 178 100.0
Haze_05007 Corylus avellana HOM05D007468 ORTHO05D009051 1.4e-72 276.6 180 86.1
Haze_05006 Corylus avellana HOM05D007468 ORTHO05D009051 5.1e-67 258.1 180 81.7
CiPaw.07G114800 Carya illinoinensis HOM05D007468 ORTHO05D009051 3.4e-31 139.0 157 56.7
CiPaw.08G091800 Carya illinoinensis HOM05D007468 ORTHO05D009051 5.5e-29 131.7 168 54.8
CANSAT25G0675 Cannabis sativa HOM05D007468 ORTHO05D009051 8.8e-19 97.8 186 40.3
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 2.0e-18 96.7 177 42.9
TAR362G1257 Trochodendron aralioides HOM05D007468 ORTHO05D009051 7.4e-18 94.7 148 46.6
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 2.4e-16 89.7 139 46.0
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 2.4e-16 89.7 175 39.4
Aqoxy2G02809 Aquilegia oxysepala HOM05D007468 ORTHO05D009051 4.1e-16 89.0 175 37.7
Phvul.007G216300 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 5.9e-15 85.1 189 37.6
Psat3g020640 Pisum sativum HOM05D007468 ORTHO05D009051 5.9e-15 85.1 179 38.5
Nn3g21627 Nelumbo nucifera HOM05D007468 ORTHO05D009051 1.3e-14 84.0 186 36.6
TAR365G0390 Trochodendron aralioides HOM05D007468 ORTHO05D009051 1.4e-13 80.5 156 44.2
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 2.5e-13 79.7 174 35.6
MELO3C015942.2 Cucumis melo HOM05D007468 ORTHO05D009051 3.2e-13 79.3 152 42.8
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 4.2e-13 79.0 177 36.2
ClCG09G005280 Citrullus lanatus HOM05D007468 ORTHO05D009051 7.2e-13 78.2 166 36.7
CsaV3_4G001100 Cucumis sativus L. HOM05D007468 ORTHO05D009051 9.4e-13 77.8 208 37.5
Glyma.19G214800 Glycine max HOM05D007468 ORTHO05D009051 9.4e-13 77.8 190 37.9
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 1.2e-12 77.4 174 37.4
PSO210G3413 Papaver somniferum HOM05D007468 ORTHO05D009051 2.1e-12 76.6 175 37.1
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 2.7e-12 76.3 162 42.6
Sed0000824 Sechium edule HOM05D007468 ORTHO05D009051 2.7e-12 76.3 157 40.8
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 2.7e-12 76.3 184 36.4
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 3.6e-12 75.9 162 42.6
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 3.6e-12 75.9 162 42.6
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 3.6e-12 75.9 162 42.6
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 3.6e-12 75.9 170 36.5
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 4.7e-12 75.5 171 39.2
Ca_09200_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 6.1e-12 75.1 185 34.1
Ca_10302_v3 Cicer arietinum L. HOM05D007468 ORTHO05D009051 1.0e-11 74.3 162 35.2
Lj1g0017695 Lotus japonicus HOM05D007468 ORTHO05D009051 1.0e-11 74.3 152 38.2
Prupe.8G269500 Prunus persica HOM05D007468 ORTHO05D009051 1.0e-11 74.3 162 37.7
MELO3C017927.2 Cucumis melo HOM05D007468 ORTHO05D009051 1.4e-11 73.9 195 39.0
Lalb_Chr21g0309461 Lupinus albus HOM05D007468 ORTHO05D009051 1.4e-11 73.9 185 32.4
Psat5g096000 Pisum sativum HOM05D007468 ORTHO05D009051 1.8e-11 73.6 198 35.9
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 3.0e-11 72.8 168 38.1
TPR.G20290 Trifolium pratense HOM05D007468 ORTHO05D009051 3.9e-11 72.4 211 34.1
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 5.2e-11 72.0 172 38.4
Phvul.001G211600 Phaseolus vulgaris HOM05D007468 ORTHO05D009051 6.7e-11 71.6 178 37.1
Glyma.02G014400 Glycine max HOM05D007468 ORTHO05D009051 8.8e-11 71.2 185 37.3
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 8.8e-11 71.2 168 38.7
A09p01600 Brassica napus HOM05D010095 ORTHO05D012148 1.1e-10 70.9 173 32.9
BraA09t35818Z Brassica rapa HOM05D010095 ORTHO05D012148 1.1e-10 70.9 170 32.4
BcaB01g02075 Brassica carinata HOM05D010095 ORTHO05D012148 1.5e-10 70.5 178 32.0
Lalb_Chr15g0078361 Lupinus albus HOM05D007468 ORTHO05D009051 1.5e-10 70.5 198 33.8
C09p01700 Brassica napus HOM05D010095 ORTHO05D012148 2.6e-10 69.7 175 32.0
BolC9t53104H Brassica oleracea HOM05D010095 ORTHO05D012148 2.6e-10 69.7 175 32.0
Sed0007650 Sechium edule HOM05D007468 ORTHO05D009051 4.4e-10 68.9 201 37.3
Sc05g0000570 Simmondsia chinensis HOM05D007468 ORTHO05D009051 5.7e-10 68.6 176 36.4
Cpa.g.sc18.3 Carica papaya HOM05D007468 ORTHO05D009051 9.7e-10 67.8 174 36.8
AT4G02160 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 1.7e-09 67.0 178 33.7
MBI19_g29995_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 1.7e-09 67.0 187 35.8
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 3.7e-09 65.9 167 40.7
VMungo0720G2271 Vigna mungo HOM05D007468 ORTHO05D009051 3.7e-09 65.9 191 34.6
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 4.8e-09 65.5 180 34.4
BcaC04g24041 Brassica carinata HOM05D010095 ORTHO05D012148 1.1e-08 64.3 193 29.5
Aa31LG1G9880 Aethionema arabicum HOM05D010095 ORTHO05D012148 1.4e-08 63.9 79 46.8
Glyma.03G218100 Glycine max HOM05D007468 ORTHO05D009051 2.4e-08 63.2 186 35.5
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 3.1e-08 62.8 167 37.7
AT5G61710 Arabidopsis thaliana HOM05D010095 ORTHO05D012148 5.3e-08 62.0 152 36.8
Nn4g25660 Nelumbo nucifera HOM05D007468 ORTHO05D009051 5.3e-08 62.0 62 56.5
PSO357G0021 Papaver somniferum HOM05D007468 ORTHO05D009051 9.1e-08 61.2 166 34.3
Thhalv10009861m.g Eutrema salsugineum HOM05D010095 ORTHO05D012148 1.2e-07 60.8 175 33.7
Sabra14G0091900 Salix brachista HOM05D007468 ORTHO05D009051 1.2e-07 60.8 165 32.1
Lj5g0007724 Lotus japonicus HOM05D007468 ORTHO05D009051 1.6e-07 60.5 202 30.7
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 2.0e-07 60.1 179 35.2
ATR0730G063 Amborella trichopoda HOM05D045150 ORTHO05D009051 2.6e-07 59.7 182 35.7
MBI18_g24947_MAGBIO Magnolia biondii HOM05D007468 ORTHO05D009051 3.5e-07 59.3 157 33.1
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 3.5e-07 59.3 179 35.2
VMungo1383G0307 Vigna mungo HOM05D007468 ORTHO05D009051 4.5e-07 58.9 165 34.5
CAN.G1209.19 Capsicum annuum HOM05D007468 ORTHO05D009051 5.9e-07 58.5 183 31.7
Medtr7g109300 Medicago truncatula HOM05D007468 ORTHO05D009051 5.9e-07 58.5 56 51.8
BcaB03g15797 Brassica carinata HOM05D010095 ORTHO05D012148 1.0e-06 57.8 197 31.0
Ciclev10024491m.g Citrus clementina HOM05D007468 ORTHO05D009051 1.0e-06 57.8 161 37.3
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 1.3e-06 57.4 164 34.8
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 1.3e-06 57.4 134 35.1
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 1.3e-06 57.4 122 39.3
Dinv10066 Davidia involucrata HOM05D007468 ORTHO05D009051 1.7e-06 57.0 93 43.0
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 1.7e-06 57.0 184 33.2
AL6G51000 Arabidopsis lyrata HOM05D010095 ORTHO05D012148 2.2e-06 56.6 167 29.9
CDE08G0146 Ceratophyllum demersum HOM05D007468 ORTHO05D009051 2.2e-06 56.6 160 31.9
ATR0706G066 Amborella trichopoda HOM05D045150 ORTHO05D009051 3.8e-06 55.8 190 32.6
PGR044G1291 Punica granatum HOM05D007468 ORTHO05D009051 3.8e-06 55.8 196 33.7
TAR633G0421 Trochodendron aralioides HOM05D007468 ORTHO05D009051 3.8e-06 55.8 66 53.0
PSO170G3554 Papaver somniferum HOM05D007468 ORTHO05D009051 5.0e-06 55.5 152 34.2
Eucgr.H01069 Eucalyptus grandis HOM05D007468 ORTHO05D009051 8.5e-06 54.7 156 35.9
Lalb_Chr08g0237891 Lupinus albus HOM05D007468 ORTHO05D009051 8.5e-06 54.7 216 27.8


User provided reference genes

Program Settings