Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005675 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.8e-156 555.8 278 100.0
Cfa007688 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.4e-148 529.6 278 95.3
Cfa017593 Carpinus fangiana HOM05D011725 ORTHO05D016914 4.7e-144 514.6 274 92.0
Cfa002544 Carpinus fangiana HOM05D011725 ORTHO05D016914 2.4e-140 502.3 278 91.7
Cfa002218 Carpinus fangiana HOM05D011725 ORTHO05D016914 2.8e-27 126.7 70 84.3
Cfa019942 Carpinus fangiana HOM05D020463 ORTHO05D022255 8.0e-27 125.2 279 36.2
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 1.2e-25 121.3 214 38.8
Haze_01657 Corylus avellana HOM05D011725 ORTHO05D016914 2.4e-23 113.6 268 33.2
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.6e-17 93.6 201 32.3
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.3e-16 91.3 197 33.0
Haze_22035 Corylus avellana HOM05D011725 ORTHO05D016914 4.9e-16 89.4 106 46.2
Haze_22038 Corylus avellana HOM05D011725 ORTHO05D016914 4.9e-16 89.4 106 46.2
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.9e-16 89.4 198 35.4
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.9e-15 87.4 193 32.6
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 2.4e-15 87.0 213 30.0
Haze_23755 Corylus avellana HOM05D011725 ORTHO05D016914 7.0e-15 85.5 85 47.1
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 3.5e-14 83.2 211 33.2
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-13 80.5 202 30.7
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 3.0e-13 80.1 211 28.9
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 5.0e-13 79.3 204 31.9
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 8.6e-13 78.6 196 34.2
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 8.6e-13 78.6 198 31.3
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 1.1e-12 78.2 204 31.4
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.9e-12 77.4 219 27.9
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.9e-12 77.4 205 29.8
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 1.9e-12 77.4 194 30.4
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 2.5e-12 77.0 194 30.4
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-12 76.6 204 30.9
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-12 76.6 197 32.0
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-12 76.6 204 30.9
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-12 76.6 204 30.9
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 7.3e-12 75.5 204 30.9
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 9.5e-12 75.1 199 30.2
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-11 74.7 204 27.0
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.2e-11 74.7 196 29.1
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 2.1e-11 73.9 204 27.0
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 2.1e-11 73.9 204 27.0
CiPaw.08G101500 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.8e-11 73.6 210 27.1
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 2.8e-11 73.6 204 30.9
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 6.2e-11 72.4 201 28.4
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 1.1e-10 71.6 179 30.2
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 1.1e-10 71.6 199 31.2
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 1.4e-10 71.2 200 30.5
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-10 70.5 201 28.4
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 2.3e-10 70.5 202 29.2
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 2.3e-10 70.5 202 29.2
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 2.3e-10 70.5 228 26.3
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 3.1e-10 70.1 200 31.0
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 4.0e-10 69.7 209 27.3
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 8.9e-10 68.6 197 26.4
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.5e-09 67.8 191 27.7
CiPaw.10G123700 Carya illinoinensis HOM05D003171 ORTHO05D000921 2.0e-09 67.4 214 24.8
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.0e-09 67.4 196 25.0
TWI74G1594 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 2.6e-09 67.0 197 28.4
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 3.4e-09 66.6 59 47.5
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 4.4e-09 66.2 211 26.5
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 5.8e-09 65.9 208 26.9
Oeu041025.1 Olea europaea HOM05D000254 ORTHO05D000921 5.8e-09 65.9 61 50.8
Haze_06051 Corylus avellana HOM05D020463 ORTHO05D022255 7.5e-09 65.5 152 30.9
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 9.8e-09 65.1 199 27.1
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 9.8e-09 65.1 210 31.4
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 1.3e-08 64.7 197 29.9
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.7e-08 64.3 67 43.3
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 1.7e-08 64.3 197 26.9
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.7e-08 64.3 194 25.3
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 1.7e-08 64.3 208 26.9
Medtr1g094760 Medicago truncatula HOM05D001243 ORTHO05D000843 2.2e-08 63.9 190 33.2
Dinv11893 Davidia involucrata HOM05D007209 ORTHO05D000921 2.9e-08 63.5 202 28.7
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 2.9e-08 63.5 203 27.1
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 3.7e-08 63.2 196 23.5
CiPaw.15G091800 Carya illinoinensis HOM05D003171 ORTHO05D000921 6.4e-08 62.4 178 27.5
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 6.4e-08 62.4 54 48.1
QL06p025400 Quercus lobata HOM05D003171 ORTHO05D000921 6.4e-08 62.4 184 31.0
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 8.3e-08 62.0 210 27.1
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 8.3e-08 62.0 202 28.7
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 1.4e-07 61.2 200 28.0
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 1.4e-07 61.2 198 27.8
CiPaw.01G106700 Carya illinoinensis HOM05D003171 ORTHO05D000921 1.9e-07 60.8 215 28.4
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 1.9e-07 60.8 197 26.4
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 1.9e-07 60.8 197 26.4
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 1.9e-07 60.8 197 26.4
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 2.4e-07 60.5 190 28.4
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.4e-07 60.5 196 25.0
FAN22G1922 Fragaria x ananassa HOM05D003171 ORTHO05D000921 2.4e-07 60.5 196 25.0
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 3.2e-07 60.1 205 24.9
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 3.2e-07 60.1 180 25.0
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 4.1e-07 59.7 196 28.6
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 5.4e-07 59.3 54 42.6
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 7.1e-07 58.9 200 29.5
Dinv42302 Davidia involucrata HOM05D007209 ORTHO05D000921 7.1e-07 58.9 204 27.0
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 7.1e-07 58.9 61 42.6
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 9.2e-07 58.5 204 26.5
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.2e-06 58.2 200 26.0
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 1.2e-06 58.2 197 26.9
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 1.2e-06 58.2 203 24.1
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 1.2e-06 58.2 203 24.1
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 1.6e-06 57.8 203 24.1
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 2.1e-06 57.4 58 41.4
CSS0035449 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 3.5e-06 56.6 197 23.9
Haze_01723 Corylus avellana HOM05D011725 ORTHO05D016914 3.5e-06 56.6 109 33.0
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 3.5e-06 56.6 106 29.2
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 4.6e-06 56.2 197 25.4
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 4.6e-06 56.2 140 30.0
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 6.0e-06 55.8 105 35.2
GSVIVG01038689001 Vitis vinifera HOM05D000665 ORTHO05D000921 6.0e-06 55.8 200 30.0
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 7.8e-06 55.5 78 37.2
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 7.8e-06 55.5 56 51.8


User provided reference genes

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