Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005665 Carpinus fangiana HOM05D020682 ORTHO05D020353 1.1e-167 593.2 293 100.0
Haze_01557 Corylus avellana HOM05D020682 ORTHO05D020353 1.6e-49 200.7 262 48.5
Cfa007134 Carpinus fangiana HOM05D020682 ORTHO05D020353 3.1e-45 186.4 101 92.1
Cfa017753 Carpinus fangiana HOM05D020682 ORTHO05D020353 4.0e-45 186.0 102 92.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 5.4e-42 175.6 99 88.9
Cfa019900 Carpinus fangiana HOM05D020682 ORTHO05D020353 3.1e-37 159.8 130 68.5
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.8e-19 99.8 211 32.7
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.2e-18 96.7 194 32.5
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 5.5e-18 95.9 211 31.8
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.1e-17 94.0 211 31.3
Cfa001437 Carpinus fangiana HOM05D020682 ORTHO05D020353 4.6e-17 92.8 108 55.6
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.1e-15 88.2 115 44.3
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.3e-15 86.3 116 43.1
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.7e-15 85.1 115 40.0
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.7e-15 85.1 115 40.0
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-14 84.0 199 34.7
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-14 83.6 115 40.0
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-14 83.6 115 40.0
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-14 83.6 115 40.0
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.8e-14 83.6 190 35.8
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.7e-14 83.2 115 40.0
Rhsim01G0178700 Rhododendron simsii HOM05D001309 ORTHO05D000385 3.7e-14 83.2 122 41.0
Rhsim03G0023700 Rhododendron simsii HOM05D001309 ORTHO05D020353 6.3e-14 82.4 152 36.8
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.2e-14 82.0 109 40.4
Haze_06052 Corylus avellana HOM05D022078 ORTHO05D024871 8.2e-14 82.0 215 32.1
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-13 81.6 115 39.1
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-12 77.8 286 28.0
Rhsim01G0064900 Rhododendron simsii HOM05D019892 ORTHO05D023103 7.7e-12 75.5 97 41.2
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.3e-11 74.7 180 28.9
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.5e-11 72.4 123 35.8
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-10 70.5 147 36.7
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.5e-10 69.3 142 35.9
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-09 67.4 103 37.9
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.6e-09 66.6 185 33.0
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.1e-09 65.9 117 38.5
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.9e-09 65.5 128 39.1
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-08 65.1 117 38.5
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.9e-08 63.2 116 32.8
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.9e-08 63.2 116 32.8
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.9e-08 63.2 116 32.8
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.9e-08 63.2 116 32.8
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.1e-08 62.8 154 32.5
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.5e-07 61.2 128 30.5
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.0e-07 60.8 177 30.5
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.6e-07 60.5 208 28.4
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-07 60.5 115 31.3
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-07 60.5 124 31.5
RcHm_v2.0_Chr7g0237841 Rosa chinensis HOM05D009706 ORTHO05D009452 3.3e-07 60.1 130 36.2
MD15G1434900 Malus domestica HOM05D005763 ORTHO05D005970 5.7e-07 59.3 166 29.5
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.4e-07 58.9 178 31.5
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.4e-07 58.9 154 31.8
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 9.7e-07 58.5 156 32.1
Lsat_1_v5_gn_7_21840 Lactuca sativa HOM05D008309 ORTHO05D012513 9.7e-07 58.5 127 33.1
C01p42640 Brassica napus HOM05D008309 ORTHO05D010308 1.3e-06 58.2 119 37.8
Haze_06050 Corylus avellana HOM05D022078 ORTHO05D024871 1.3e-06 58.2 104 36.5
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 1.7e-06 57.8 140 28.6
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 2.2e-06 57.4 168 28.6
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.8e-06 57.0 168 28.0
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.8e-06 57.0 132 34.1
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.8e-06 56.2 116 30.2
MD15G1435100 Malus domestica HOM05D008595 ORTHO05D000669 6.3e-06 55.8 127 33.1
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 6.3e-06 55.8 124 29.8
TAR383G0938 Trochodendron aralioides HOM05D009698 ORTHO05D000385 8.2e-06 55.5 133 28.6
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.2e-06 55.5 111 33.3
TAR633G1500 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.2e-06 55.5 102 34.3


User provided reference genes

Program Settings