Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 5.9e-114 414.5 247 100.0
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 2.9e-105 385.6 247 94.3
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 4.5e-90 335.1 251 82.5
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 6.8e-78 294.7 247 74.5
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.5e-77 293.5 249 69.1
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 5.7e-77 291.6 249 70.3
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.7e-76 290.0 249 69.9
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 6.3e-76 288.1 249 69.1
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 1.1e-75 287.3 204 74.5
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.4e-75 287.0 247 65.2
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 1.8e-75 286.6 248 64.1
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.4e-75 286.2 249 65.5
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 4.1e-75 285.4 252 73.4
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 5.4e-75 285.0 251 74.5
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 9.2e-75 284.3 255 67.8
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 1.2e-74 283.9 252 71.4
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 2.7e-74 282.7 247 75.3
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 2.7e-74 282.7 254 68.1
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 2.7e-74 282.7 250 64.0
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.1e-72 277.3 250 63.6
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.5e-72 276.9 271 62.4
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 1.9e-72 276.6 274 71.5
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.5e-72 276.2 254 70.5
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 5.6e-72 275.0 248 61.3
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.6e-71 273.5 250 72.8
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 6.1e-71 271.6 248 63.7
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.3e-70 269.6 252 65.9
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 5.2e-70 268.5 248 75.4
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 5.2e-70 268.5 248 61.7
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 8.9e-70 267.7 248 75.0
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.6e-69 266.2 251 68.1
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 2.6e-69 266.2 251 68.1
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 3.4e-69 265.8 251 64.9
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 4.4e-69 265.4 250 61.6
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 7.5e-69 264.6 271 60.1
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 8.3e-68 261.2 200 69.5
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 8.3e-68 261.2 251 70.5
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 1.1e-67 260.8 249 70.3
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 4.1e-67 258.8 256 60.2
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 4.1e-67 258.8 249 71.1
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 7.0e-67 258.1 204 70.6
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 3.5e-66 255.8 252 65.5
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 6.0e-66 255.0 252 60.7
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.0e-65 254.2 252 58.7
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.3e-65 253.8 203 71.9
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.3e-65 253.1 252 60.3
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 3.9e-65 252.3 251 61.0
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 3.9e-65 252.3 252 59.1
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 5.0e-65 251.9 249 67.9
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 6.6e-65 251.5 249 58.6
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.1e-64 250.8 254 61.4
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 4.3e-64 248.8 250 57.6
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 5.6e-64 248.4 249 69.5
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 1.2e-63 247.3 258 68.2
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 3.6e-63 245.7 260 59.2
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 3.6e-63 245.7 250 66.0
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 6.2e-63 245.0 182 74.2
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 2.0e-61 240.0 261 65.9
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 2.6e-61 239.6 295 57.3
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 9.8e-61 237.7 195 67.7
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 1.3e-60 237.3 252 60.7
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 2.2e-60 236.5 195 67.2
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 8.3e-60 234.6 250 57.6
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.4e-59 233.8 195 67.2
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 2.4e-59 233.0 190 68.4
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 2.7e-58 229.6 252 56.0
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.5e-56 223.8 256 55.1
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 1.9e-56 223.4 249 63.9
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 4.3e-56 222.2 283 57.6
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 1.6e-55 220.3 255 55.7
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 6.2e-55 218.4 251 53.4
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.4e-54 217.2 247 53.8
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 3.1e-54 216.1 247 53.4
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 5.2e-54 215.3 249 57.0
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 6.8e-54 214.9 250 51.2
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 8.9e-54 214.5 249 59.8
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.2e-53 214.2 260 53.1
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 2.6e-53 213.0 249 59.0
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 3.4e-53 212.6 249 53.8
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 3.4e-53 212.6 247 53.4
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 4.4e-53 212.2 247 51.8
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 9.9e-53 211.1 249 59.0
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-52 210.7 249 59.0
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 2.9e-52 209.5 247 52.2
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 3.7e-52 209.1 192 61.5
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 6.4e-52 208.4 247 51.8
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 9.2e-51 204.5 249 61.0
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 3.5e-50 202.6 249 51.8
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 3.5e-50 202.6 247 51.4
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-49 200.7 207 58.5
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 1.3e-49 200.7 207 58.5
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 3.9e-49 199.1 136 77.9
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 6.6e-49 198.4 207 58.9
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 1.1e-48 197.6 264 49.6
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.9e-48 196.8 249 61.8
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 5.6e-48 195.3 196 58.7
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 7.3e-48 194.9 196 58.7
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 9.6e-48 194.5 257 48.6
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.2e-47 194.1 137 78.1
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 2.8e-47 193.0 196 58.2
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.8e-47 193.0 249 61.4
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.8e-46 190.3 211 59.2
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.2e-45 187.6 150 69.3
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 2.0e-45 186.8 195 57.9
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 3.4e-45 186.0 150 68.7
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 5.8e-45 185.3 135 74.1
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 9.9e-45 184.5 189 58.2
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 7.1e-43 178.3 188 54.3
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 3.5e-42 176.0 247 46.2
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 1.3e-39 167.5 188 54.8
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 2.4e-38 163.3 258 45.7
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 3.4e-37 159.5 121 71.1
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 5.1e-33 145.6 267 39.0
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.1e-32 144.4 212 50.0
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 2.5e-32 143.3 197 45.7
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 7.3e-32 141.7 252 40.9
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 2.1e-31 140.2 172 50.0
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 1.2e-29 134.4 203 44.3
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 1.5e-29 134.0 179 48.0
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 8.7e-25 118.2 176 54.5
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 2.4e-22 110.2 73 74.0
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.5e-21 107.5 161 60.2
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 1.5e-21 107.5 181 43.6
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.0e-20 104.8 74 74.3
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 4.2e-19 99.4 178 39.3
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 5.5e-19 99.0 135 46.7
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.3e-15 87.8 220 33.2
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 1.7e-12 77.4 75 57.3
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 6.5e-12 75.5 84 50.0
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 2.5e-11 73.6 104 49.0
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 7.2e-11 72.0 91 51.6
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 5.1e-09 65.9 240 38.8
FAN15G2545 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.2e-07 60.5 120 61.7
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 9.0e-06 55.1 104 41.3


User provided reference genes

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