Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 3.8e-61 238.0 123 100.0
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 5.8e-38 161.0 106 75.5
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 1.3e-37 159.8 106 74.5
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 5.6e-33 144.4 122 63.1
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 9.6e-33 143.7 117 68.4
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.1e-32 142.5 112 65.2
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 6.2e-32 141.0 112 63.4
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 8.2e-32 140.6 107 65.4
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 1.1e-31 140.2 112 63.4
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 1.4e-31 139.8 112 64.3
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 1.4e-31 139.8 121 60.3
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 2.4e-31 139.0 112 60.7
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 2.4e-31 139.0 123 58.5
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 3.1e-31 138.7 107 63.6
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 4.0e-31 138.3 107 63.6
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 4.0e-31 138.3 124 58.1
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 6.9e-31 137.5 120 57.5
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 1.2e-30 136.7 107 64.5
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 1.2e-30 136.7 107 63.6
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 1.5e-30 136.3 114 60.5
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.5e-30 136.3 123 57.7
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 2.0e-30 136.0 112 61.6
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 2.0e-30 136.0 109 62.4
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 2.6e-30 135.6 112 59.8
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 2.6e-30 135.6 120 59.2
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 2.6e-30 135.6 120 59.2
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 2.6e-30 135.6 120 59.2
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 3.4e-30 135.2 112 58.9
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 3.4e-30 135.2 112 58.9
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 3.4e-30 135.2 109 61.5
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 4.5e-30 134.8 119 59.7
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 4.5e-30 134.8 120 55.8
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 5.8e-30 134.4 112 61.6
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 5.8e-30 134.4 112 61.6
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 5.8e-30 134.4 105 63.8
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 7.6e-30 134.0 117 61.5
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 7.6e-30 134.0 110 61.8
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 7.6e-30 134.0 112 58.0
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 7.6e-30 134.0 112 61.6
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 7.6e-30 134.0 112 62.5
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 1.0e-29 133.7 117 57.3
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 1.0e-29 133.7 117 57.3
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 1.0e-29 133.7 112 58.0
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 1.0e-29 133.7 117 57.3
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 1.3e-29 133.3 107 60.7
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 1.3e-29 133.3 107 60.7
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 1.3e-29 133.3 107 61.7
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 1.3e-29 133.3 124 57.3
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 1.3e-29 133.3 113 60.2
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 1.3e-29 133.3 119 58.0
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 2.2e-29 132.5 112 59.8
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 2.2e-29 132.5 109 61.5
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 2.9e-29 132.1 107 61.7
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 2.9e-29 132.1 112 59.8
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 2.9e-29 132.1 112 59.8
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.9e-29 132.1 112 59.8
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 3.8e-29 131.7 107 60.7
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 4.9e-29 131.3 124 54.8
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 4.9e-29 131.3 123 56.1
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 6.5e-29 131.0 123 55.3
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 6.5e-29 131.0 112 57.1
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 6.5e-29 131.0 112 58.9
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 6.5e-29 131.0 112 59.8
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 8.4e-29 130.6 125 55.2
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 8.4e-29 130.6 121 56.2
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 1.4e-28 129.8 124 58.9
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 1.4e-28 129.8 124 54.8
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 1.9e-28 129.4 107 59.8
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-28 129.4 103 63.1
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-28 129.4 103 63.1
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-28 129.4 103 63.1
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 1.9e-28 129.4 108 61.1
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 2.5e-28 129.0 112 57.1
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 2.5e-28 129.0 108 61.1
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 2.5e-28 129.0 108 61.1
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 4.2e-28 128.3 118 56.8
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 5.5e-28 127.9 108 58.3
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 7.1e-28 127.5 103 62.1
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 7.1e-28 127.5 112 56.2
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 9.3e-28 127.1 107 62.6
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 9.3e-28 127.1 112 58.9
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 9.3e-28 127.1 100 66.0
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 1.2e-27 126.7 123 55.3
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 2.1e-27 125.9 121 57.9
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 2.1e-27 125.9 116 56.0
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 4.6e-27 124.8 107 57.9
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 4.6e-27 124.8 111 63.1
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 6.0e-27 124.4 107 58.9
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 7.9e-27 124.0 121 56.2
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 7.9e-27 124.0 121 56.2
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 7.9e-27 124.0 107 57.9
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 7.9e-27 124.0 121 56.2
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 1.0e-26 123.6 121 56.2
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 1.0e-26 123.6 103 61.2
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 1.0e-26 123.6 121 56.2
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 1.0e-26 123.6 103 61.2
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 1.0e-26 123.6 107 57.9
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 1.0e-26 123.6 112 56.2
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 1.3e-26 123.2 107 57.9
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 1.3e-26 123.2 121 55.4
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 1.3e-26 123.2 118 55.9
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 1.8e-26 122.9 121 55.4
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 1.8e-26 122.9 121 55.4
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 1.8e-26 122.9 121 55.4
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 1.8e-26 122.9 121 55.4
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 1.8e-26 122.9 121 55.4
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 1.8e-26 122.9 121 55.4
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 2.3e-26 122.5 121 55.4
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 2.3e-26 122.5 104 60.6
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 3.0e-26 122.1 119 55.5
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 3.9e-26 121.7 121 54.5
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 3.9e-26 121.7 121 54.5
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 3.9e-26 121.7 109 57.8
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 6.7e-26 120.9 119 57.1
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 6.7e-26 120.9 126 53.2
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 8.7e-26 120.6 96 62.5
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 1.5e-25 119.8 123 52.8
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 2.5e-25 119.0 103 60.2
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 5.7e-25 117.9 101 59.4
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 6.3e-24 114.4 102 59.8
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 6.3e-24 114.4 91 63.7
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 4.1e-23 111.7 104 52.9
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 3.8e-21 105.1 71 70.4
TPR.G6292 Trifolium pratense HOM05D004626 ORTHO05D005185 3.8e-21 105.1 99 57.6
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 3.8e-21 105.1 104 49.0
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 5.0e-21 104.8 97 60.8
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 1.1e-20 103.6 94 59.6
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 1.1e-20 103.6 90 60.0
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 1.1e-20 103.6 103 51.5
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.9e-20 102.8 103 55.3
VMungo0251G0963 Vigna mungo HOM05D004626 ORTHO05D005185 1.9e-20 102.8 103 54.4
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.5e-20 102.4 76 65.8
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 2.5e-20 102.4 103 51.5
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 4.2e-20 101.7 103 51.5
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 2.1e-19 99.4 93 57.0
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 2.1e-19 99.4 92 57.6
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 1.0e-18 97.1 92 55.4
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 1.4e-18 96.7 110 47.3
Lalb_Chr22g0353781 Lupinus albus HOM05D004626 ORTHO05D005185 6.7e-18 94.4 75 61.3
vmacro18600 Vaccinium macrocarpon HOM05D004626 ORTHO05D005185 1.9e-17 92.8 90 57.8
Nn1g04969 Nelumbo nucifera HOM05D004626 ORTHO05D005185 2.8e-16 89.0 105 46.7
Medtr8g090225 Medicago truncatula HOM05D004626 ORTHO05D005185 6.3e-16 87.8 99 51.5
Nitab4.5_0006375g0050 Nicotiana tabacum HOM05D004626 ORTHO05D005185 3.4e-14 82.0 63 69.8
SalBow3G4134 Salvia bowleyana HOM05D004626 ORTHO05D005185 5.0e-13 78.2 76 56.6
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 2.7e-11 72.4 88 44.3
Ciclev10029799m.g Citrus clementina HOM05D004626 ORTHO05D005185 1.0e-10 70.5 84 48.8
Medtr3g079680 Medicago truncatula HOM05D004626 ORTHO05D005185 1.0e-10 70.5 94 43.6
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 2.3e-10 69.3 99 41.4
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 1.5e-09 66.6 87 41.4
Potri.007G093100 Populus trichocarpa HOM05D004626 ORTHO05D005185 1.5e-09 66.6 102 39.2


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