Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 6.7e-93 344.0 170 100.0
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 1.0e-77 293.5 154 94.2
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 2.1e-62 242.7 130 93.1
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 3.0e-61 238.8 166 72.9
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 7.5e-60 234.2 154 76.0
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 2.2e-59 232.6 157 74.5
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 6.3e-59 231.1 154 72.7
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 4.3e-55 218.4 155 71.6
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 6.1e-54 214.5 157 66.9
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 6.8e-53 211.1 155 69.7
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 1.5e-52 209.9 158 69.0
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 4.9e-51 204.9 157 70.1
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 5.9e-49 198.0 159 65.4
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 3.9e-48 195.3 158 62.0
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 8.6e-48 194.1 167 62.9
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 1.1e-47 193.7 150 64.7
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 1.5e-47 193.4 153 64.7
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 3.3e-47 192.2 154 61.0
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 1.6e-46 189.9 153 65.4
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 2.8e-46 189.1 154 61.0
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 8.0e-46 187.6 157 65.0
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 2.3e-45 186.0 159 63.5
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 2.3e-45 186.0 159 63.5
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 2.3e-45 186.0 170 55.9
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 3.1e-45 185.7 155 63.9
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 4.0e-45 185.3 161 62.1
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 8.9e-45 184.1 154 63.6
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 2.6e-44 182.6 152 66.4
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 2.6e-44 182.6 161 64.6
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 2.6e-44 182.6 171 62.0
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 3.4e-44 182.2 155 59.4
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 3.4e-44 182.2 154 57.1
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 6.4e-43 177.9 166 57.2
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 1.4e-42 176.8 161 64.0
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 3.2e-42 175.6 159 61.0
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 5.4e-42 174.9 153 60.8
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 9.2e-42 174.1 144 59.0
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 1.2e-41 173.7 179 54.7
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 2.0e-41 172.9 175 52.6
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 1.0e-40 170.6 159 58.5
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 1.0e-40 170.6 165 57.6
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 1.3e-40 170.2 160 58.8
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 1.3e-40 170.2 158 58.2
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 1.7e-40 169.9 154 59.1
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 5.0e-40 168.3 144 57.6
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 8.6e-40 167.5 154 59.1
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 1.5e-39 166.8 156 58.3
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 2.5e-39 166.0 160 60.0
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 2.5e-39 166.0 160 60.0
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 2.5e-39 166.0 156 58.3
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 7.3e-39 164.5 154 58.4
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 7.3e-39 164.5 155 59.4
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 7.3e-39 164.5 160 59.4
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 7.3e-39 164.5 155 59.4
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 9.5e-39 164.1 158 55.7
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 1.2e-38 163.7 159 56.0
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 6.2e-38 161.4 156 58.3
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 8.1e-38 161.0 159 56.0
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 1.4e-37 160.2 151 59.6
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 1.4e-37 160.2 151 59.6
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 1.4e-37 160.2 156 58.3
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 1.4e-37 160.2 99 76.8
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 6.8e-37 157.9 151 58.9
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 6.8e-37 157.9 159 57.9
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 1.2e-36 157.1 168 52.4
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 1.5e-36 156.8 159 57.9
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 1.5e-36 156.8 156 56.4
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 1.5e-36 156.8 164 53.0
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 2.0e-36 156.4 133 60.2
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 5.8e-36 154.8 113 68.1
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 7.5e-36 154.5 165 52.7
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 7.5e-36 154.5 156 57.7
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 3.7e-35 152.1 136 60.3
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 4.9e-35 151.8 152 56.6
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 8.3e-35 151.0 151 57.6
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 1.1e-34 150.6 165 57.6
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.1e-34 150.6 151 58.3
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 1.1e-34 150.6 167 53.9
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 2.1e-33 146.4 148 54.1
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 2.7e-33 146.0 163 52.1
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 3.3e-31 139.0 141 51.8
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 9.5e-31 137.5 158 55.1
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 9.5e-31 137.5 115 61.7
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 1.1e-29 134.0 149 56.4
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.1e-29 134.0 111 60.4
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 1.4e-29 133.7 82 73.2
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 1.2e-28 130.6 116 61.2
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 3.8e-27 125.6 164 46.3
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 4.9e-27 125.2 162 49.4
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 1.1e-26 124.0 82 68.3
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 1.4e-26 123.6 163 47.2
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 1.9e-26 123.2 161 52.8
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 1.9e-26 123.2 86 69.8
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 2.4e-26 122.9 159 46.5
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 4.1e-26 122.1 163 46.6
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 4.1e-26 122.1 86 68.6
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 5.4e-26 121.7 153 50.3
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 1.2e-25 120.6 158 52.5
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 1.6e-25 120.2 153 48.4
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 2.7e-25 119.4 107 59.8
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 3.5e-25 119.0 160 46.9
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 3.5e-25 119.0 94 64.9
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 3.0e-24 115.9 174 45.4
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 5.1e-24 115.2 82 63.4
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 3.6e-22 109.0 126 56.3
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 6.2e-22 108.2 134 50.0
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.8e-21 106.7 107 59.8
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 2.4e-21 106.3 107 58.9
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.7e-19 100.1 157 42.0
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 2.9e-19 99.4 128 45.3
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.9e-18 96.7 87 60.9
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 1.9e-18 96.7 151 36.4
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 5.4e-18 95.1 91 53.8
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 5.4e-18 95.1 91 54.9
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 7.1e-18 94.7 116 47.4
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 2.7e-17 92.8 84 59.5
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.7e-16 90.1 84 58.3
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 2.3e-16 89.7 80 61.2
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 5.1e-16 88.6 92 46.7
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 5.1e-16 88.6 93 48.4
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 8.7e-16 87.8 50 76.0
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 2.5e-15 86.3 96 44.8
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 6.2e-14 81.6 135 39.3
FAN14G3055 Fragaria x ananassa HOM05D002283 ORTHO05D005725 2.0e-12 76.6 62 64.5
FvH4_6g36141 Fragaria vesca HOM05D002283 ORTHO05D005725 5.1e-08 62.0 83 47.0
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 6.2e-06 55.1 34 73.5


User provided reference genes

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