Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 4.8e-227 790.8 395 100.0
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 8.1e-182 640.6 387 84.0
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 9.0e-157 557.4 410 72.0
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.5e-156 556.6 534 59.6
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 2.6e-156 555.8 379 74.7
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 4.5e-156 555.1 380 74.5
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 8.4e-155 550.8 337 80.7
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 8.4e-155 550.8 406 72.7
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.2e-154 548.9 422 69.9
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 5.4e-154 548.1 390 73.8
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 9.3e-154 547.4 391 73.7
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 1.2e-153 547.0 404 71.3
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 1.6e-153 546.6 336 79.2
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.6e-153 546.6 382 73.6
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 2.1e-153 546.2 361 77.0
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 1.0e-152 543.9 397 72.3
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.9e-151 539.7 341 78.3
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 2.5e-151 539.3 391 72.6
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 9.6e-151 537.3 385 71.9
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 2.8e-150 535.8 356 74.7
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 3.7e-150 535.4 412 69.7
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 4.8e-150 535.0 349 76.2
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 4.8e-150 535.0 396 69.9
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 6.2e-150 534.6 396 69.7
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 3.1e-149 532.3 392 70.9
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 3.1e-149 532.3 436 67.2
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 4.0e-149 531.9 425 68.0
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 6.9e-149 531.2 420 67.6
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 1.2e-148 530.4 338 78.7
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 1.2e-148 530.4 380 72.4
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 4.5e-148 528.5 426 66.9
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 9.9e-148 527.3 422 66.8
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 2.9e-147 525.8 330 77.9
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 2.9e-147 525.8 414 67.6
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 3.8e-147 525.4 402 70.1
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 3.8e-147 525.4 430 66.0
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.1e-146 523.9 398 68.8
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 2.4e-146 522.7 397 69.5
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 2.4e-146 522.7 373 73.2
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 7.1e-146 521.2 383 70.5
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 1.2e-145 520.4 400 69.8
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 1.0e-144 517.3 399 68.2
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.3e-144 516.2 401 68.1
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.9e-143 513.1 327 77.1
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 5.6e-143 511.5 353 73.4
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 2.1e-142 509.6 396 67.9
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 4.8e-142 508.4 392 67.9
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 4.8e-142 508.4 392 67.9
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 3.1e-141 505.8 347 73.8
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 4.0e-141 505.4 410 65.6
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 2.0e-140 503.1 336 75.3
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 2.6e-140 502.7 341 73.6
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 1.0e-139 500.7 410 65.6
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 4.9e-139 498.4 348 73.0
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 4.2e-138 495.4 385 67.5
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 4.6e-137 491.9 425 61.9
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 1.8e-136 490.0 378 65.3
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 1.8e-136 490.0 375 68.3
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 6.7e-136 488.0 333 73.9
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 8.7e-136 487.6 347 70.9
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.9e-135 486.5 426 63.8
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.9e-135 486.5 350 68.0
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 4.3e-135 485.3 403 63.8
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 7.4e-135 484.6 405 65.2
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 4.8e-134 481.9 355 67.0
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 8.2e-134 481.1 345 67.8
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 8.2e-134 481.1 345 67.8
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.4e-133 479.6 403 62.0
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 3.1e-133 479.2 380 63.7
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 4.1e-133 478.8 338 69.5
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 4.1e-133 478.8 285 81.1
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 4.1e-133 478.8 399 62.2
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 9.0e-133 477.6 359 68.5
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.2e-132 477.2 329 70.2
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 3.4e-132 475.7 345 66.7
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.7e-131 473.4 402 61.4
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 2.2e-131 473.0 379 64.6
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 3.8e-131 472.2 322 72.4
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 1.1e-130 470.7 333 71.8
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.1e-130 470.7 375 64.3
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 1.1e-130 470.7 544 52.2
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 4.2e-130 468.8 408 62.3
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 2.7e-129 466.1 242 97.1
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 2.3e-128 463.0 362 63.0
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 6.7e-128 461.5 328 69.8
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 4.3e-127 458.8 355 65.4
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 1.3e-126 457.2 355 65.1
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 4.8e-126 455.3 355 64.5
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 4.8e-126 455.3 355 64.5
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 6.3e-126 454.9 373 64.3
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 9.1e-125 451.1 355 63.7
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 9.1e-125 451.1 333 67.9
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 2.6e-124 449.5 343 65.0
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.0e-123 447.6 373 63.5
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.4e-122 443.7 326 66.9
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 1.4e-120 437.2 459 56.2
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 1.5e-119 433.7 338 66.0
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 1.3e-118 430.6 395 58.7
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 4.1e-117 425.6 336 66.7
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 2.6e-116 422.9 337 65.9
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.3e-115 420.6 397 58.4
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 6.5e-115 418.3 392 55.6
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 8.0e-113 411.4 333 67.0
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 3.3e-111 406.0 272 70.6
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 8.2e-110 401.4 224 85.3
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.1e-109 401.0 295 67.5
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.2e-108 397.5 318 62.9
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 3.5e-108 396.0 224 84.8
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 5.5e-106 388.7 224 81.7
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 3.3e-103 379.4 271 67.2
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 2.2e-102 376.7 307 70.0
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 3.6e-97 359.4 256 71.5
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 6.1e-97 358.6 261 65.1
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 2.3e-96 356.7 289 61.6
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 2.3e-96 356.7 576 41.3
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 1.2e-92 344.4 278 69.1
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 7.7e-92 341.7 317 63.1
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 5.0e-91 339.0 200 80.0
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.8e-83 312.8 292 54.5
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 5.0e-83 312.4 215 69.3
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 6.6e-83 312.0 216 70.8
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 8.9e-80 301.6 390 49.7
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 3.0e-75 286.6 239 59.8
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.3e-42 176.4 264 39.4
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 3.1e-40 170.2 256 36.3
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 4.9e-30 136.3 287 32.4
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 4.6e-28 129.8 123 56.1
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 8.7e-27 125.6 247 34.8
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 2.8e-25 120.6 130 52.3
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.4e-24 118.2 113 58.4
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 2.4e-24 117.5 109 58.7
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 5.3e-24 116.3 115 54.8
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.9e-24 115.9 77 71.4
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.6e-23 114.0 138 49.3
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 5.8e-23 112.8 88 65.9
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.6e-23 112.5 74 74.3
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.6e-23 112.5 74 74.3
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 1.7e-22 111.3 114 52.6
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.8e-22 110.2 74 70.3
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.5e-22 109.4 74 70.3
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 7.1e-21 105.9 74 67.6
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 3.4e-15 87.0 49 87.8
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 4.5e-15 86.7 259 26.6
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 4.2e-13 80.1 166 30.7
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 9.4e-13 79.0 170 35.3
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 7.9e-12 75.9 166 30.1
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 8.8e-11 72.4 204 32.4
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 4.3e-10 70.1 170 30.6
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 8.5e-06 55.8 69 44.9


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