Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005532 Carpinus fangiana HOM05D003483 ORTHO05D004101 1.2e-141 506.5 260 100.0
Haze_01644 Corylus avellana HOM05D003483 ORTHO05D004101 2.4e-97 359.4 229 86.0
Haze_01648 Corylus avellana HOM05D003483 ORTHO05D004101 5.1e-92 341.7 214 86.9
CiPaw.05G043400 Carya illinoinensis HOM05D003483 ORTHO05D004101 2.5e-83 312.8 224 76.3
QL02p098396 Quercus lobata HOM05D003483 ORTHO05D004101 3.3e-75 285.8 227 71.8
Dinv19357 Davidia involucrata HOM05D003483 ORTHO05D004101 4.1e-73 278.9 230 71.3
FvH4_5g29660 Fragaria vesca HOM05D003483 ORTHO05D004101 3.4e-72 275.8 228 68.9
FAN18G3047 Fragaria x ananassa HOM05D003483 ORTHO05D004101 1.7e-71 273.5 228 68.4
COL.COLO4_17880 Corchorus olitorius HOM05D003483 ORTHO05D004101 3.8e-71 272.3 231 67.5
FAN13G0976 Fragaria x ananassa HOM05D003483 ORTHO05D004101 1.2e-69 267.3 224 68.3
Thecc.02G039800 Theobroma cacao HOM05D003483 ORTHO05D004101 2.1e-69 266.5 230 66.1
TAR381G1595 Trochodendron aralioides HOM05D003483 ORTHO05D004101 2.1e-69 266.5 191 74.3
PGR142G1721 Punica granatum HOM05D003483 ORTHO05D004101 3.6e-69 265.8 225 68.0
MD15G1421500 Malus domestica HOM05D003483 ORTHO05D004101 7.9e-69 264.6 227 68.3
vmacro01768 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 3.0e-68 262.7 229 69.0
Manes.07G014600 Manihot esculenta HOM05D003483 ORTHO05D004101 3.9e-68 262.3 228 66.7
Hma1.2p1_0557F.1_g178380 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 5.1e-68 261.9 229 65.9
RcHm_v2.0_Chr7g0222941 Rosa chinensis HOM05D003483 ORTHO05D004101 6.7e-68 261.5 226 67.3
Actinidia39049 Actinidia chinensis HOM05D003483 ORTHO05D004101 1.5e-67 260.4 227 66.5
Atru.chr6.836 Acer truncatum HOM05D003483 ORTHO05D004101 7.4e-67 258.1 225 67.1
Rhsim11G0130100 Rhododendron simsii HOM05D003483 ORTHO05D004101 7.4e-67 258.1 233 66.1
Ca_00080_v3 Cicer arietinum L. HOM05D003483 ORTHO05D004101 1.7e-66 256.9 190 72.6
FAN04G0580 Fragaria x ananassa HOM05D003483 ORTHO05D004101 2.2e-66 256.5 225 67.1
Glyma.15G047000 Glycine max HOM05D003483 ORTHO05D004101 2.2e-66 256.5 172 77.3
Gorai.002G209300 Gossypium raimondii HOM05D003483 ORTHO05D004101 2.8e-66 256.1 226 65.9
Prupe.1G566700 Prunus persica HOM05D003483 ORTHO05D004101 2.8e-66 256.1 197 75.1
Gohir.D01G168600 Gossypium hirsutum HOM05D003483 ORTHO05D004101 4.8e-66 255.4 226 64.6
GSVIVG01022995001 Vitis vinifera HOM05D003483 ORTHO05D004101 4.8e-66 255.4 214 67.8
Lj6g0009955 Lotus japonicus HOM05D003483 ORTHO05D004101 8.2e-66 254.6 226 67.7
Sabra01G0161900 Salix brachista HOM05D003483 ORTHO05D004101 8.2e-66 254.6 230 63.5
Gohir.A01G177800 Gossypium hirsutum HOM05D003483 ORTHO05D004101 1.1e-65 254.2 224 65.2
VMungo0540G0086 Vigna mungo HOM05D003483 ORTHO05D004101 4.1e-65 252.3 221 65.6
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 5.3e-65 251.9 225 63.1
Glyma.08G185800 Glycine max HOM05D003483 ORTHO05D004101 6.9e-65 251.5 227 66.5
TPR.G2131 Trifolium pratense HOM05D003483 ORTHO05D004101 1.2e-64 250.8 229 65.9
CANSAT11G2084 Cannabis sativa HOM05D003483 ORTHO05D004101 1.5e-64 250.4 227 65.2
TWI59G0966 Tripterygium wilfordii HOM05D003483 ORTHO05D004101 1.5e-64 250.4 233 63.5
Phvul.006G214200 Phaseolus vulgaris HOM05D003483 ORTHO05D004101 2.0e-64 250.0 170 77.1
Cc02_g22380 Coffea canephora HOM05D003483 ORTHO05D004101 3.4e-64 249.2 230 63.9
Aqoxy5G02410 Aquilegia oxysepala HOM05D003483 ORTHO05D004101 5.9e-64 248.4 229 63.8
Psat1g224560 Pisum sativum HOM05D003483 ORTHO05D004101 1.7e-63 246.9 226 65.0
MELO3C010097.2 Cucumis melo HOM05D003483 ORTHO05D004101 2.2e-63 246.5 227 63.4
Lj9A307T41 Lonicera japonica HOM05D003483 ORTHO05D004101 2.2e-63 246.5 183 71.6
Sed0016447 Sechium edule HOM05D003483 ORTHO05D004101 2.9e-63 246.1 235 63.8
Cpa.g.sc2.3 Carica papaya HOM05D003483 ORTHO05D004101 3.8e-63 245.7 226 65.0
Nn1g08897 Nelumbo nucifera HOM05D003483 ORTHO05D004101 3.8e-63 245.7 228 63.6
Potri.001G209600 Populus trichocarpa HOM05D003483 ORTHO05D004101 5.0e-63 245.4 235 61.7
CAN.G336.10 Capsicum annuum HOM05D003483 ORTHO05D004101 6.5e-63 245.0 224 63.4
arahy.Tifrunner.gnm1.ann1.021TT5 Arachis hypogaea HOM05D003483 ORTHO05D004101 8.5e-63 244.6 197 69.5
CsaV3_1G045010 Cucumis sativus L. HOM05D003483 ORTHO05D004101 8.5e-63 244.6 227 62.6
Lalb_Chr15g0090651 Lupinus albus HOM05D003483 ORTHO05D004101 1.9e-62 243.4 187 70.1
Eucgr.I02716 Eucalyptus grandis HOM05D003483 ORTHO05D004101 5.5e-62 241.9 252 57.9
Medtr2g007300 Medicago truncatula HOM05D003483 ORTHO05D004101 1.6e-61 240.4 225 61.8
TAR376G1167 Trochodendron aralioides HOM05D003483 ORTHO05D004101 2.7e-61 239.6 174 72.4
GSVIVG01022998001 Vitis vinifera HOM05D003483 ORTHO05D004101 5.1e-60 235.3 169 71.0
CSS0038053 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.5e-59 233.8 197 69.0
Cfa005534 Carpinus fangiana HOM05D003483 ORTHO05D004101 7.4e-59 231.5 178 65.7
MBI03_g28296_MAGBIO Magnolia biondii HOM05D003483 ORTHO05D004101 1.3e-58 230.7 235 58.7
Solyc11g044530.2 Solanum lycopersicum HOM05D003483 ORTHO05D004101 1.3e-58 230.7 225 61.8
Lsat_1_v5_gn_9_118261 Lactuca sativa HOM05D003483 ORTHO05D004101 1.7e-58 230.3 230 59.6
EL10Ac9g22715 Beta vulgaris HOM05D003483 ORTHO05D004101 2.2e-58 229.9 166 70.5
Sc06g0009790 Simmondsia chinensis HOM05D003483 ORTHO05D004101 2.2e-58 229.9 214 61.7
Migut.N01039 Erythranthe guttata HOM05D003483 ORTHO05D004101 6.3e-58 228.4 241 58.5
QL02p098403 Quercus lobata HOM05D003483 ORTHO05D004101 1.4e-57 227.3 198 62.6
ATR0684G013 Amborella trichopoda HOM05D003483 ORTHO05D004101 1.8e-57 226.9 170 70.0
COL.COLO4_17881 Corchorus olitorius HOM05D003483 ORTHO05D004101 2.4e-57 226.5 236 57.2
Peaxi162Scf00152g01330 Petunia axillaris HOM05D003483 ORTHO05D004101 4.1e-57 225.7 229 59.8
HanXRQChr06g0185051 Helianthus annuus HOM05D003483 ORTHO05D004101 5.3e-57 225.3 227 59.9
CSS0036812 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.2e-56 224.2 211 64.5
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 1.5e-56 223.8 190 63.2
SGA_v2.0_scaffold145G36069 Striga asiatica HOM05D003483 ORTHO05D004101 2.6e-56 223.0 232 58.2
VMungo0540G1714 Vigna mungo HOM05D003483 ORTHO05D004101 3.4e-56 222.6 169 66.3
DCAR_021518 Daucus carota HOM05D003483 ORTHO05D004101 4.5e-56 222.2 228 59.2
CANSAT11G2020 Cannabis sativa HOM05D003483 ORTHO05D004101 1.7e-55 220.3 225 59.6
CSS0026849 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 2.2e-55 219.9 226 58.0
Glyma.15G047700 Glycine max HOM05D003483 ORTHO05D004101 2.2e-55 219.9 199 59.3
Cc02_g22350 Coffea canephora HOM05D003483 ORTHO05D004101 2.9e-55 219.5 169 68.0
vmacro01767 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 2.9e-55 219.5 163 74.2
Gohir.A04G126900 Gossypium hirsutum HOM05D003483 ORTHO05D004101 5.0e-55 218.8 218 58.3
Duzib248G1166 Durio zibethinus HOM05D003483 ORTHO05D004101 6.5e-55 218.4 219 58.9
Hma1.2p1_0217F.1_g091970 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 6.5e-55 218.4 238 54.2
AUR62015054 Chenopodium quinoa HOM05D003483 ORTHO05D004101 8.5e-55 218.0 229 58.1
SalBow6G5065 Salvia bowleyana HOM05D003483 ORTHO05D004101 8.5e-55 218.0 227 59.5
SalBow6G7249 Salvia bowleyana HOM05D003483 ORTHO05D004101 8.5e-55 218.0 227 59.5
PGSC0003DMG400023753 Solanum tuberosum HOM05D003483 ORTHO05D004101 3.2e-54 216.1 196 61.2
Eucgr.I02715 Eucalyptus grandis HOM05D003483 ORTHO05D004101 5.5e-54 215.3 167 67.7
Gorai.012G160700 Gossypium raimondii HOM05D003483 ORTHO05D004101 9.4e-54 214.5 218 56.9
arahy.Tifrunner.gnm1.ann1.G5V2PN Arachis hypogaea HOM05D003483 ORTHO05D004101 1.2e-53 214.2 193 60.6
unitig_699.g19861 Utricularia gibba HOM05D003483 ORTHO05D004101 1.2e-53 214.2 172 65.1
Manes.07G014500 Manihot esculenta HOM05D003483 ORTHO05D004101 3.6e-53 212.6 226 56.2
Phvul.006G213100 Phaseolus vulgaris HOM05D003483 ORTHO05D004101 3.6e-53 212.6 224 58.0
Nitab4.5_0002245g0170 Nicotiana tabacum HOM05D003483 ORTHO05D004101 4.7e-53 212.2 224 54.9
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 4.7e-53 212.2 168 65.5
arahy.Tifrunner.gnm1.ann1.MUYK2J Arachis hypogaea HOM05D003483 ORTHO05D004101 1.0e-52 211.1 190 60.5
Cpa.g.sc2.4 Carica papaya HOM05D003483 ORTHO05D004101 1.4e-52 210.7 214 55.6
Lj6g0022843 Lotus japonicus HOM05D003483 ORTHO05D004101 1.8e-52 210.3 222 56.3
Nitab4.5_0003819g0040 Nicotiana tabacum HOM05D003483 ORTHO05D004101 1.8e-52 210.3 224 54.9
CAN.G1577.5 Capsicum annuum HOM05D003483 ORTHO05D004101 2.3e-52 209.9 230 54.8
MSTRG.5236 Avicennia marina HOM05D003483 ORTHO05D004101 3.9e-52 209.1 217 56.2
Peaxi162Scf00011g00242 Petunia axillaris HOM05D003483 ORTHO05D004101 5.2e-52 208.8 233 54.9
Medtr2g007640 Medicago truncatula HOM05D003483 ORTHO05D004101 8.8e-52 208.0 230 54.8
Glyma.08G185000 Glycine max HOM05D003483 ORTHO05D004101 1.1e-51 207.6 223 54.7
MD15G1421400 Malus domestica HOM05D003483 ORTHO05D004101 2.0e-51 206.8 229 55.0
HanXRQChr03g0066831 Helianthus annuus HOM05D003483 ORTHO05D004101 7.4e-51 204.9 171 64.9
Hund01591 Selenicereus undatus HOM05D003483 ORTHO05D004101 9.7e-51 204.5 209 58.4
Thhalv10004837m.g Eutrema salsugineum HOM05D003483 ORTHO05D004101 1.3e-50 204.1 191 58.6
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 1.7e-50 203.8 155 69.0
Aa31LG2G6290 Aethionema arabicum HOM05D003483 ORTHO05D004101 4.8e-50 202.2 214 56.1
SalBow6G5560 Salvia bowleyana HOM05D003483 ORTHO05D004101 4.8e-50 202.2 171 60.8
A06p42270 Brassica napus HOM05D003483 ORTHO05D004101 6.3e-50 201.8 191 59.2
BraA06t27143Z Brassica rapa HOM05D003483 ORTHO05D004101 6.3e-50 201.8 191 59.2
BcaC06g33930 Brassica carinata HOM05D003483 ORTHO05D004101 8.2e-50 201.4 169 63.3
Ca_00085_v3 Cicer arietinum L. HOM05D003483 ORTHO05D004101 8.2e-50 201.4 226 54.4
AL5G14750 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 1.1e-49 201.1 191 57.6
AT3G26070 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 1.4e-49 200.7 191 57.6
PGR142G0005 Punica granatum HOM05D003483 ORTHO05D004101 2.4e-49 199.9 215 56.3
Nn1g08607 Nelumbo nucifera HOM05D003483 ORTHO05D004101 3.1e-49 199.5 207 58.9
C07p35050 Brassica napus HOM05D003483 ORTHO05D004101 4.1e-49 199.1 207 57.0
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 4.1e-49 199.1 213 55.9
CARHR147060 Cardamine hirsuta HOM05D003483 ORTHO05D004101 4.1e-49 199.1 169 62.1
Ciclev10002308m.g Citrus clementina HOM05D003483 ORTHO05D004101 9.1e-49 198.0 227 54.2
Ah.01g002720 Amaranthus hybridus HOM05D003483 ORTHO05D004101 1.6e-48 197.2 192 59.9
BcaC06g31094 Brassica carinata HOM05D003483 ORTHO05D004101 1.6e-48 197.2 169 61.5
Thecc.02G039900 Theobroma cacao HOM05D003483 ORTHO05D004101 2.0e-48 196.8 231 55.8
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 2.0e-48 196.8 179 60.3
THA.LOC104825685 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 2.6e-48 196.4 171 63.7
AL5G14760 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 4.5e-48 195.7 187 55.6
Nitab4.5_0000044g0170 Nicotiana tabacum HOM05D003483 ORTHO05D004101 5.9e-48 195.3 227 55.5
Carub.0005s0393 Capsella rubella HOM05D003483 ORTHO05D004101 7.7e-48 194.9 214 53.7
Ciclev10003624m.g Citrus clementina HOM05D003483 ORTHO05D004101 1.0e-47 194.5 187 62.6
Duzib132G0067 Durio zibethinus HOM05D003483 ORTHO05D004101 1.0e-47 194.5 228 53.5
CiPaw.06G148300 Carya illinoinensis HOM05D003483 ORTHO05D004101 1.3e-47 194.1 201 57.2
ECA240G0807 Erigeron canadensis HOM05D003483 ORTHO05D004101 1.3e-47 194.1 152 65.8
Sp2g15270 Schrenkiella parvula HOM05D003483 ORTHO05D004101 1.7e-47 193.7 187 57.2
AT3G26080 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 2.2e-47 193.4 208 51.9
SalBow6G7247 Salvia bowleyana HOM05D003483 ORTHO05D004101 2.2e-47 193.4 229 52.4
Lsat_1_v5_gn_9_118240 Lactuca sativa HOM05D003483 ORTHO05D004101 2.9e-47 193.0 233 51.9
Gohir.D04G171800 Gossypium hirsutum HOM05D003483 ORTHO05D004101 8.5e-47 191.4 166 62.0
Dinv24264 Davidia involucrata HOM05D003483 ORTHO05D004101 1.9e-46 190.3 205 55.1
THA.LOC104824018 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 5.5e-46 188.7 171 61.4
Os03g0704100 Oryza sativa ssp. japonica HOM05D003483 ORTHO05D004101 7.2e-46 188.3 178 59.6
Psat1g224320 Pisum sativum HOM05D003483 ORTHO05D004101 9.4e-46 188.0 192 57.8
vmacro19900 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 1.6e-45 187.2 293 44.4
MSTRG.5233 Avicennia marina HOM05D003483 ORTHO05D004101 4.7e-45 185.7 193 58.0
Carub.0005s0394 Capsella rubella HOM05D003483 ORTHO05D004101 4.7e-45 185.7 192 55.2
Oeu000192.1 Olea europaea HOM05D003483 ORTHO05D004101 2.3e-44 183.3 182 61.5
Pp3c23_15450 Physcomitrium patens HOM05D003483 ORTHO05D004101 2.3e-44 183.3 163 62.0
Nitab4.5_0001783g0130 Nicotiana tabacum HOM05D003483 ORTHO05D004101 4.4e-43 179.1 119 78.2
AagrBONN_evm.TU.Sc2ySwM_344.1832 Anthoceros agrestis HOM05D003483 ORTHO05D004101 9.7e-43 177.9 157 61.1
arahy.Tifrunner.gnm1.ann1.19GFYA Arachis hypogaea HOM05D003483 ORTHO05D004101 1.7e-42 177.2 229 54.6
Sabra03G0012000 Salix brachista HOM05D003483 ORTHO05D004101 2.2e-42 176.8 285 44.2
SMO347G0483 Selaginella moellendorffii HOM05D003483 ORTHO05D004101 4.8e-42 175.6 158 60.8
PSO170G3925 Papaver somniferum HOM05D003483 ORTHO05D004101 1.4e-41 174.1 230 48.3
Sopen11g020090 Solanum pennellii HOM05D003483 ORTHO05D004101 5.9e-40 168.7 175 58.9
BcaC06g31097 Brassica carinata HOM05D000468 ORTHO05D004101 1.3e-39 167.5 119 69.7
AUR62017511 Chenopodium quinoa HOM05D003483 ORTHO05D004101 8.5e-39 164.9 122 68.9
ClCG09G014000 Citrullus lanatus HOM05D003483 ORTHO05D004101 2.5e-38 163.3 173 54.9
Solyc01g104320.4 Solanum lycopersicum HOM05D003483 ORTHO05D004101 3.2e-38 162.9 175 55.4
AUR62017510 Chenopodium quinoa HOM05D003483 ORTHO05D004101 1.6e-37 160.6 230 47.4
AUR62015051 Chenopodium quinoa HOM05D003483 ORTHO05D004101 1.4e-36 157.5 229 47.2
Oeu000193.1 Olea europaea HOM05D003483 ORTHO05D004101 3.0e-36 156.4 178 53.9
Lj6g0024243 Lotus japonicus HOM05D003483 ORTHO05D004101 4.0e-36 156.0 174 55.2
Hund01593 Selenicereus undatus HOM05D003483 ORTHO05D004101 3.4e-35 152.9 225 48.0
RcHm_v2.0_Chr7g0222921 Rosa chinensis HOM05D003483 ORTHO05D004101 2.7e-32 143.3 217 48.4
Mapoly0103s0070 Marchantia polymorpha HOM05D003483 ORTHO05D004101 1.0e-31 141.4 132 56.1
Cre03.g188650 Chlamydomonas reinhardtii HOM05D003483 ORTHO05D004101 5.5e-30 135.6 148 52.0
TPR.G22934 Trifolium pratense HOM05D003483 ORTHO05D004101 2.1e-29 133.7 110 63.6
Haze_01640 Corylus avellana HOM05D003483 ORTHO05D004101 2.3e-28 130.2 153 53.6
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 6.8e-28 128.6 134 53.7
Haze_01645 Corylus avellana HOM05D003483 ORTHO05D004101 8.9e-28 128.3 153 52.9
Actinidia00213 Actinidia chinensis HOM05D003483 ORTHO05D004101 2.2e-26 123.6 149 51.7
TPR.G2065 Trifolium pratense HOM05D003483 ORTHO05D004101 1.4e-25 120.9 124 54.8
PRCOL_00005437 Prasinoderma coloniale HOM05D003483 ORTHO05D004101 3.1e-25 119.8 147 46.3
MCO03G426 Micromonas commoda HOM05D003483 ORTHO05D004101 1.6e-24 117.5 153 44.4
Sopen01g046770 Solanum pennellii HOM05D003483 ORTHO05D004101 4.5e-24 115.9 143 52.4
TPR.G30715 Trifolium pratense HOM05D003483 ORTHO05D004101 2.3e-23 113.6 147 50.3
HPP92_011153 Vanilla planifolia HOM05D003483 ORTHO05D004101 2.1e-21 107.1 143 46.2
Sopen01g046760 Solanum pennellii HOM05D003483 ORTHO05D004101 3.0e-20 103.2 88 62.5
CBR_g3139 Chara braunii HOM05D003483 ORTHO05D004101 4.0e-20 102.8 181 39.2
Actinidia17473 Actinidia chinensis HOM05D004517 ORTHO05D005366 2.7e-16 90.1 69 68.1
MCO15G394 Micromonas commoda HOM05D003483 ORTHO05D004101 1.6e-13 80.9 175 34.3
TPR.G31211 Trifolium pratense HOM05D003483 ORTHO05D004101 2.6e-11 73.6 51 72.5
PGSC0003DMG400033698 Solanum tuberosum HOM05D003483 ORTHO05D004101 2.7e-08 63.5 50 70.0
PRCOL_00003721 Prasinoderma coloniale HOM05D003483 ORTHO05D002254 1.9e-06 57.4 77 42.9
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 4.3e-06 56.2 67 47.8
SEGI_35413 Sequoiadendron giganteum HOM05D003483 ORTHO05D004101 4.3e-06 56.2 190 25.3


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