Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 2.7e-242 841.6 452 100.0
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 1.9e-211 739.2 553 77.0
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 5.8e-184 647.9 438 82.0
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 2.5e-163 579.3 442 74.4
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.6e-160 569.3 438 70.8
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 9.3e-158 560.8 441 68.0
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 1.2e-157 560.5 438 67.8
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 1.0e-156 557.4 438 67.6
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 3.0e-156 555.8 437 66.6
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 6.7e-156 554.7 441 67.8
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 8.7e-156 554.3 441 68.0
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 1.1e-153 547.4 441 67.1
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 1.1e-153 547.4 440 66.6
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 9.0e-153 544.3 418 68.9
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.6e-152 542.7 441 67.1
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 1.7e-151 540.0 437 66.6
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 2.2e-151 539.7 437 65.0
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 4.9e-151 538.5 438 66.7
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.2e-150 535.4 455 64.4
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 1.9e-147 526.6 438 63.7
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 5.8e-144 515.0 473 59.8
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.1e-139 500.7 447 62.9
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 1.5e-139 500.4 392 69.1
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 4.3e-139 498.8 440 61.4
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 9.0e-137 491.1 439 59.2
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 1.5e-136 490.3 440 59.5
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 7.7e-136 488.0 433 62.4
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 9.4e-134 481.1 439 59.7
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 1.6e-133 480.3 434 60.8
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.6e-133 480.3 437 60.4
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 1.0e-132 477.6 446 60.3
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 3.0e-132 476.1 442 59.0
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 5.1e-132 475.3 437 60.2
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 3.3e-131 472.6 445 59.8
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 4.3e-131 472.2 437 59.5
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 5.7e-131 471.9 373 67.0
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 4.8e-130 468.8 425 57.6
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 6.3e-130 468.4 437 60.2
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 5.3e-129 465.3 592 49.2
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 6.9e-129 464.9 447 59.1
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 5.9e-128 461.8 437 56.3
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 8.5e-127 458.0 460 56.5
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 1.4e-126 457.2 437 58.4
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 4.2e-126 455.7 454 57.3
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 9.4e-126 454.5 425 58.1
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 1.2e-125 454.1 441 54.2
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 1.2e-125 454.1 438 56.8
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 1.0e-124 451.1 425 57.9
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 1.1e-123 447.6 438 55.5
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 1.5e-123 447.2 369 63.7
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 2.0e-123 446.8 432 54.2
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.6e-123 446.4 437 59.0
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 4.4e-123 445.7 439 54.2
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 7.4e-123 444.9 438 58.4
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 4.8e-122 442.2 437 57.0
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 2.4e-121 439.9 439 53.5
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 5.3e-121 438.7 448 53.8
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 9.1e-121 438.0 437 57.0
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.0e-120 436.8 438 57.8
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 1.0e-119 434.5 439 56.5
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.8e-119 432.6 322 71.1
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 1.1e-118 431.0 442 57.2
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 1.1e-118 431.0 438 54.8
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 3.2e-118 429.5 432 54.4
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 3.6e-117 426.0 438 54.3
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 1.4e-116 424.1 446 53.6
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 1.8e-116 423.7 449 53.9
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 2.3e-116 423.3 432 53.9
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 3.0e-116 422.9 416 57.5
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 7.4e-115 418.3 437 53.8
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 1.7e-114 417.2 455 52.3
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 2.8e-114 416.4 432 53.0
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 2.8e-114 416.4 497 48.7
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 8.2e-114 414.8 455 51.2
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 8.2e-114 414.8 455 51.2
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 1.1e-113 414.5 437 55.6
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 1.6e-112 410.6 438 53.0
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 5.9e-112 408.7 437 52.4
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 1.3e-111 407.5 438 53.7
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 6.5e-111 405.2 435 53.8
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 4.2e-110 402.5 449 52.3
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 2.7e-109 399.8 447 51.7
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 3.6e-109 399.4 439 53.5
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 3.6e-109 399.4 439 52.8
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 6.1e-109 398.7 442 52.5
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 8.0e-109 398.3 459 52.7
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.0e-108 396.0 464 52.4
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 8.2e-106 388.3 303 67.0
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 1.4e-105 387.5 439 48.1
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 1.8e-105 387.1 436 52.1
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 4.1e-105 386.0 464 48.1
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.6e-104 384.0 416 53.1
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 7.7e-104 381.7 439 51.3
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 1.7e-103 380.6 437 50.8
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.2e-103 380.2 448 51.6
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 8.5e-103 378.3 346 63.3
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.2e-102 375.9 437 50.6
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 4.7e-101 372.5 431 49.7
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 1.0e-100 371.3 429 50.6
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 1.1e-97 361.3 457 47.7
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.8e-97 360.5 446 50.4
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 4.1e-97 359.4 398 52.3
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.0e-95 354.8 424 49.3
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.5e-94 350.9 353 54.7
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 3.0e-92 343.2 424 48.1
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 1.6e-88 330.9 427 48.9
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 3.8e-87 326.2 248 64.9
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 6.4e-82 308.9 477 42.6
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 4.1e-81 306.2 417 44.8
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 6.0e-80 302.4 287 56.1
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 5.0e-79 299.3 325 50.5
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 6.6e-79 298.9 344 53.2
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 2.0e-75 287.3 436 40.4
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 5.8e-75 285.8 610 34.9
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 3.7e-74 283.1 308 52.9
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.6e-69 267.7 221 61.1
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 3.1e-68 263.5 443 39.3
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 8.3e-66 255.4 220 67.3
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 4.1e-65 253.1 445 37.3
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 2.1e-64 250.8 205 60.5
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 3.0e-63 246.9 265 50.6
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 7.3e-62 242.3 413 40.0
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 1.1e-60 238.4 229 54.1
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 7.6e-59 232.3 445 35.3
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 8.4e-50 202.2 217 57.1
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 1.6e-48 198.0 173 65.3
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 4.6e-48 196.4 340 36.5
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 3.3e-46 190.3 206 46.6
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.9e-42 176.4 425 33.6
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 2.4e-41 174.1 434 30.9
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 1.0e-39 168.7 382 34.8
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 3.9e-39 166.8 204 43.6
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 5.1e-39 166.4 160 56.9
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 8.7e-39 165.6 410 31.7
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 1.1e-30 138.7 204 42.6
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 2.5e-30 137.5 164 51.2
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 3.7e-29 133.7 99 61.6
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 2.0e-27 127.9 250 31.6
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 5.8e-27 126.3 145 52.4
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 1.0e-26 125.6 112 67.0
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.9e-26 124.0 144 54.2
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.5e-24 117.1 447 28.4
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.3e-23 115.2 123 48.0
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 3.3e-22 110.5 82 69.5
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 1.3e-21 108.6 96 66.7
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.8e-21 106.7 80 60.0
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 2.6e-19 100.9 74 73.0
TPR.G18400 Trifolium pratense HOM05D004546 ORTHO05D005419 4.8e-13 80.1 66 63.6
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 6.9e-12 76.3 440 22.5
COL.COLO4_15711 Corchorus olitorius HOM05D004546 ORTHO05D005419 8.5e-10 69.3 68 60.3
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 7.2e-09 66.2 127 32.3
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.9e-08 62.8 43 76.7
arahy.Tifrunner.gnm1.ann1.MTQ0B2 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.0e-07 62.4 91 44.0
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 1.0e-07 62.4 156 26.9
SMO118G0303 Selaginella moellendorffii HOM05D044143 ORTHO05D050877 5.1e-07 60.1 231 26.8
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 2.0e-06 58.2 425 20.0


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