Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 5.5e-245 850.5 427 100.0
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 3.5e-191 671.8 424 79.2
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 2.8e-188 662.1 421 79.6
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.5e-178 629.8 380 81.3
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.8e-177 625.2 406 78.8
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.9e-177 624.8 426 73.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 8.4e-177 624.0 395 76.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.1e-176 623.6 396 78.5
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.1e-176 623.6 398 78.4
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 1.9e-176 622.9 366 83.3
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.2e-176 621.7 382 81.9
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 9.3e-176 620.5 391 78.5
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.0e-175 617.8 389 78.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 7.9e-175 617.5 423 74.2
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.8e-174 616.3 392 77.6
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 8.7e-174 614.0 389 77.4
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.1e-173 613.6 382 79.1
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.2e-170 603.6 380 75.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 2.6e-170 602.4 406 74.9
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.7e-169 599.7 427 72.1
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 3.8e-169 598.6 365 78.6
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.1e-168 597.0 364 79.9
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 2.5e-168 595.9 416 72.4
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.6e-167 593.2 365 78.1
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 2.1e-167 592.8 364 77.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 4.6e-167 591.7 366 76.8
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 7.9e-167 590.9 397 73.0
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 7.9e-167 590.9 363 79.9
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.4e-166 590.1 364 77.2
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.8e-166 589.7 364 77.2
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 5.1e-166 588.2 416 70.9
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 6.7e-166 587.8 434 69.6
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 8.8e-166 587.4 397 73.0
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.1e-165 587.0 364 76.6
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 2.8e-164 582.4 362 78.5
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.8e-164 582.4 412 70.9
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.1e-163 580.5 360 77.5
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.4e-163 580.1 386 73.1
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 6.9e-163 577.8 406 72.2
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.9e-163 577.8 357 77.6
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 1.2e-162 577.0 363 75.2
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 5.9e-162 574.7 432 66.7
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.9e-161 572.4 363 74.1
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 3.8e-161 572.0 437 66.8
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 6.5e-161 571.2 376 73.4
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 6.5e-161 571.2 363 74.4
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.5e-161 570.9 360 75.0
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.9e-160 569.7 363 74.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 2.5e-160 569.3 363 74.7
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.2e-160 568.5 419 72.1
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 7.2e-160 567.8 416 67.3
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 1.6e-159 566.6 360 74.4
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.1e-159 566.2 360 74.4
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.4e-158 563.5 382 76.7
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 8.8e-158 560.8 347 77.2
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 2.6e-157 559.3 362 74.3
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 2.6e-157 559.3 388 70.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.3e-157 558.9 361 74.8
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 4.4e-157 558.5 363 73.0
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 5.7e-157 558.1 349 77.1
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 7.4e-157 557.8 373 71.0
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 6.3e-156 554.7 437 66.1
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 9.1e-155 550.8 342 78.1
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 9.1e-155 550.8 385 71.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.2e-154 550.4 381 74.8
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.3e-153 547.0 377 70.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.8e-153 545.4 368 71.5
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 6.5e-153 544.7 379 70.7
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.1e-151 539.7 407 67.3
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.2e-148 529.6 387 69.3
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 1.4e-147 526.9 436 64.0
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.4e-147 526.2 346 74.3
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 7.0e-147 524.6 477 57.9
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 9.1e-147 524.2 361 69.3
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.2e-146 523.9 357 70.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.3e-145 520.4 363 70.2
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.5e-144 516.9 362 69.6
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 7.2e-144 514.6 363 68.9
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 6.1e-143 511.5 435 65.7
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 2.0e-141 506.5 360 69.2
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.1e-135 486.5 350 69.1
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.4e-134 483.8 364 63.7
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 3.4e-133 479.2 297 79.5
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 3.0e-126 456.1 381 62.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 5.9e-122 441.8 343 61.5
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.5e-120 436.4 358 57.0
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.2e-116 423.3 382 62.0
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 7.5e-109 398.3 358 53.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.9e-108 395.6 339 56.3
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.4e-107 393.3 426 53.3
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.2e-103 380.9 234 77.4
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 6.2e-103 378.6 234 76.9
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-101 373.2 334 53.9
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.7e-90 336.7 286 60.1
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.1e-83 314.7 317 52.4
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.5e-69 267.7 361 45.4
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.5e-67 260.4 375 40.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 5.5e-51 206.1 130 74.6
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.6e-50 203.0 127 74.0
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.8e-44 183.3 183 54.1
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.5e-40 171.4 151 60.3
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.1e-38 165.2 108 71.3
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.8e-28 130.2 79 73.4
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.6e-26 124.8 112 57.1
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.4e-25 121.7 124 53.2
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 6.3e-23 112.8 122 53.3
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 8.3e-23 112.5 168 40.5
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.4e-22 110.9 76 72.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 3.5e-21 107.1 375 26.7
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.3e-20 105.1 67 73.1
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.1e-19 102.1 79 63.3
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 4.2e-19 100.1 99 52.5
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 1.3e-15 88.6 179 35.2
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 6.3e-15 86.3 220 30.9
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 5.4e-14 83.2 68 63.2
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 7.0e-14 82.8 52 75.0
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 3.3e-11 73.9 303 26.4
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 2.1e-10 71.2 334 25.1
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.0e-09 68.9 349 23.8


User provided reference genes

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