Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.2e-76 288.9 143 100.0
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 7.9e-71 270.4 144 94.4
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 2.9e-49 198.7 124 80.6
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 2.8e-44 182.2 142 66.9
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 8.3e-44 180.6 128 75.0
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 2.7e-42 175.6 142 68.3
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.3e-41 173.3 146 63.7
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 2.3e-41 172.6 142 63.4
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 5.0e-41 171.4 127 69.3
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 6.5e-41 171.0 143 63.6
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.1e-40 170.2 109 78.0
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 1.1e-40 170.2 143 63.6
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.5e-40 169.9 144 66.7
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 1.5e-40 169.9 124 71.0
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.9e-40 169.5 143 66.4
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.5e-40 167.2 109 76.1
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 9.5e-40 167.2 109 76.1
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 9.5e-40 167.2 108 75.9
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 2.1e-39 166.0 103 79.6
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.8e-39 165.6 147 64.6
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 3.6e-39 165.2 146 65.1
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 3.6e-39 165.2 112 75.0
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.8e-38 162.9 149 61.1
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.3e-38 162.5 119 68.1
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 3.0e-38 162.2 107 69.2
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 3.0e-38 162.2 148 62.2
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 4.0e-38 161.8 120 66.7
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 6.8e-38 161.0 143 62.9
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 8.9e-38 160.6 109 73.4
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 8.9e-38 160.6 111 72.1
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.2e-37 160.2 123 69.1
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.5e-37 159.8 116 69.8
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 2.0e-37 159.5 102 75.5
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 3.4e-37 158.7 123 67.5
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 4.4e-37 158.3 109 72.5
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 5.7e-37 157.9 99 74.7
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 7.5e-37 157.5 112 68.8
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 7.5e-37 157.5 106 72.6
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 7.5e-37 157.5 94 80.9
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.3e-36 156.8 116 69.8
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.3e-36 156.8 94 80.9
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.3e-36 156.8 107 73.8
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.7e-36 156.4 104 75.0
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 2.2e-36 156.0 119 64.7
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 3.7e-36 155.2 111 68.5
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 3.7e-36 155.2 109 72.5
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 6.3e-36 154.5 148 59.5
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 8.3e-36 154.1 104 74.0
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 1.1e-35 153.7 100 74.0
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.1e-35 153.7 125 62.4
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.4e-35 153.3 117 67.5
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.4e-35 153.3 122 66.4
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 1.8e-35 152.9 109 71.6
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.4e-35 152.5 101 73.3
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.4e-35 152.5 104 75.0
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.1e-35 151.8 144 59.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 4.1e-35 151.8 132 60.6
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 9.2e-35 150.6 118 64.4
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 9.2e-35 150.6 132 59.8
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.6e-34 149.8 101 73.3
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 2.7e-34 149.1 132 60.6
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 3.5e-34 148.7 111 67.6
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 3.5e-34 148.7 126 61.9
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 3.5e-34 148.7 115 67.8
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 4.5e-34 148.3 111 64.0
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 7.8e-34 147.5 132 59.1
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.0e-33 147.1 115 66.1
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 1.0e-33 147.1 107 67.3
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.3e-33 146.7 94 75.5
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 1.3e-33 146.7 100 70.0
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.7e-33 146.4 115 64.3
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 2.9e-33 145.6 107 65.4
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 3.8e-33 145.2 109 66.1
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.0e-33 144.8 117 65.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 8.6e-33 144.1 121 61.2
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.1e-32 143.7 117 65.8
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.5e-32 143.3 109 66.1
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.5e-32 143.3 109 66.1
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.9e-32 142.9 147 51.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.9e-32 142.9 107 67.3
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 5.6e-32 141.4 99 71.7
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 7.3e-32 141.0 107 66.4
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 7.3e-32 141.0 107 64.5
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 1.2e-31 140.2 135 56.3
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.6e-31 139.8 137 52.6
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.6e-31 139.8 148 51.4
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.6e-31 139.8 94 74.5
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 2.1e-31 139.4 93 68.8
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 2.1e-31 139.4 93 68.8
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 2.1e-31 139.4 93 68.8
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 3.6e-31 138.7 94 68.1
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 4.7e-31 138.3 118 60.2
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 6.1e-31 137.9 126 59.5
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.4e-30 136.7 126 59.5
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.3e-30 136.0 95 68.4
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 6.8e-30 134.4 92 68.5
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 2.6e-29 132.5 107 63.6
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 9.8e-29 130.6 125 58.4
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 3.7e-28 128.6 137 51.1
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 6.4e-28 127.9 168 45.2
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 6.4e-28 127.9 109 54.1
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 6.4e-28 127.9 95 64.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 2.4e-27 125.9 98 63.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.7e-26 122.5 89 70.8
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.0e-25 118.2 197 39.6
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 4.3e-24 115.2 102 60.8
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 2.1e-23 112.8 76 72.4
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 3.1e-22 109.0 101 58.4
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.2e-21 107.1 112 50.0
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 7.5e-21 104.4 61 78.7
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 5.4e-19 98.2 104 47.1
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.6e-18 96.7 55 87.3
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 4.6e-18 95.1 103 41.7
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 5.0e-17 91.7 65 75.4
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 1.1e-16 90.5 96 44.8
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.9e-16 89.7 58 75.9
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 5.6e-16 88.2 94 55.3
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 1.2e-15 87.0 94 46.8
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 6.4e-12 74.7 98 40.8
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 4.1e-11 72.0 42 73.8
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 3.6e-07 58.9 96 33.3


User provided reference genes

Program Settings