Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005387 Carpinus fangiana HOM05D000092 ORTHO05D000042 1.6e-70 269.2 126 100.0
Cfa021128 Carpinus fangiana HOM05D000092 ORTHO05D000042 6.4e-40 167.5 132 64.4
Cfa019908 Carpinus fangiana HOM05D000092 ORTHO05D000042 7.1e-39 164.1 133 60.9
Haze_04282 Corylus avellana HOM05D000092 ORTHO05D000042 3.6e-35 151.8 133 58.6
Cfa006505 Carpinus fangiana HOM05D000092 ORTHO05D000042 8.9e-34 147.1 130 56.2
Haze_04283 Corylus avellana HOM05D000092 ORTHO05D000042 5.8e-33 144.4 106 64.2
Haze_04281 Corylus avellana HOM05D000092 ORTHO05D000042 4.9e-32 141.4 122 59.8
Cfa006504 Carpinus fangiana HOM05D000092 ORTHO05D000042 6.4e-16 87.8 126 39.7
QL03p001664 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-15 87.0 167 33.5
QL03p002457 Quercus lobata HOM05D000092 ORTHO05D000042 4.2e-15 85.1 167 33.5
QL03p001787 Quercus lobata HOM05D000092 ORTHO05D000042 2.1e-14 82.8 167 32.9
Cfa019909 Carpinus fangiana HOM05D000092 ORTHO05D000042 2.7e-14 82.4 126 36.5
QL03p001771 Quercus lobata HOM05D000092 ORTHO05D000042 4.6e-14 81.6 167 32.3
QL03p002295 Quercus lobata HOM05D000092 ORTHO05D000042 1.0e-13 80.5 102 44.1
Haze_04284 Corylus avellana HOM05D000092 ORTHO05D000042 5.1e-13 78.2 123 36.6
CiPaw.08G168600 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.3e-12 75.1 125 36.8
CiPaw.08G174800 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.3e-12 75.1 125 36.8
QL03p002163 Quercus lobata HOM05D000092 ORTHO05D000042 4.3e-12 75.1 102 42.2
CiPaw.08G170000 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.6e-12 74.7 166 33.1
CiPaw.16G081300 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.3e-11 73.6 167 32.9
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.6e-11 72.0 150 30.0
CiPaw.08G116100 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.8e-11 71.6 125 36.8
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 6.2e-11 71.2 146 31.5
QL10p064739 Quercus lobata HOM05D000092 ORTHO05D000042 8.1e-11 70.9 147 33.3
QL03p001366 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-10 70.5 167 28.1
Thecc.05G225000 Theobroma cacao HOM05D000092 ORTHO05D000042 1.8e-10 69.7 149 29.5
Cfa019907 Carpinus fangiana HOM05D000092 ORTHO05D000042 5.3e-10 68.2 123 36.6
COL.COLO4_20151 Corchorus olitorius HOM05D000092 ORTHO05D000042 5.3e-10 68.2 159 30.8
Thecc.05G203000 Theobroma cacao HOM05D000092 ORTHO05D000042 5.3e-10 68.2 107 34.6
QL10p064757 Quercus lobata HOM05D000092 ORTHO05D000042 6.9e-10 67.8 125 32.8
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.0e-09 66.2 170 27.1
QL03p002643 Quercus lobata HOM05D000092 ORTHO05D000042 2.6e-09 65.9 123 33.3
Thecc.01G192900 Theobroma cacao HOM05D000092 ORTHO05D000042 3.4e-09 65.5 101 35.6
QL09p045493 Quercus lobata HOM05D000092 ORTHO05D000042 4.5e-09 65.1 161 29.2
Gorai.013G252900 Gossypium raimondii HOM05D000092 ORTHO05D000042 5.8e-09 64.7 169 27.2
Ciclev10000055m.g Citrus clementina HOM05D000092 ORTHO05D000042 7.6e-09 64.3 99 33.3
Thecc.05G225500 Theobroma cacao HOM05D000092 ORTHO05D000042 7.6e-09 64.3 149 28.2
Gohir.A13G217800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 9.9e-09 63.9 169 27.2
Atru.chr12.1821 Acer truncatum HOM05D000092 ORTHO05D000042 1.3e-08 63.5 108 35.2
Duzib177G0994 Durio zibethinus HOM05D000092 ORTHO05D000042 1.3e-08 63.5 148 27.7
Gohir.D11G270100 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.3e-08 63.5 122 32.0
Duzib177G0490 Durio zibethinus HOM05D000092 ORTHO05D000042 1.7e-08 63.2 144 29.2
Thecc.09G244900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.7e-08 63.2 162 27.2
Duzib177G0387 Durio zibethinus HOM05D000092 ORTHO05D000042 2.2e-08 62.8 104 32.7
Duzib192G0564 Durio zibethinus HOM05D000092 ORTHO05D000042 2.9e-08 62.4 103 32.0
Gorai.007G291000 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.9e-08 62.4 143 29.4
CiPaw.07G074100 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.8e-08 62.0 123 31.7
COL.COLO4_37555 Corchorus olitorius HOM05D000092 ORTHO05D000042 3.8e-08 62.0 169 26.6
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.8e-08 62.0 124 29.8
Lalb_Chr01g0006961 Lupinus albus HOM05D000092 ORTHO05D000042 4.9e-08 61.6 160 28.1
Duzib177G0159 Durio zibethinus HOM05D000092 ORTHO05D000042 6.4e-08 61.2 104 32.7
Potri.005G061860 Populus trichocarpa HOM05D000092 ORTHO05D000042 6.4e-08 61.2 97 34.0
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 8.4e-08 60.8 166 27.1
Manes.08G163700 Manihot esculenta HOM05D000092 ORTHO05D000042 8.4e-08 60.8 157 25.5
Atru.chr4.1749 Acer truncatum HOM05D000092 ORTHO05D000042 1.1e-07 60.5 172 25.0
Gohir.D13G221800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.1e-07 60.5 169 26.6
QL03p001996 Quercus lobata HOM05D000092 ORTHO05D000042 1.1e-07 60.5 125 32.0
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 1.1e-07 60.5 151 27.8
Thecc.05G318300 Theobroma cacao HOM05D000092 ORTHO05D000042 1.1e-07 60.5 151 29.8
COL.COLO4_13577 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.4e-07 60.1 159 28.3
Medtr2g072020 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-07 60.1 159 25.8
Atru.chr2.1458 Acer truncatum HOM05D000092 ORTHO05D000042 1.9e-07 59.7 106 31.1
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 1.9e-07 59.7 146 28.1
Gohir.D11G270500 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.9e-07 59.7 143 28.0
Gohir.D11G325601 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.9e-07 59.7 151 26.5
Gorai.007G290400 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.9e-07 59.7 122 30.3
Medtr1g037250 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-07 59.7 170 27.1
Thecc.05G202500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.9e-07 59.7 149 26.8
Gorai.007G290700 Gossypium raimondii HOM05D000092 ORTHO05D000042 2.4e-07 59.3 143 28.0
Lalb_Chr20g0109001 Lupinus albus HOM05D000092 ORTHO05D000042 2.4e-07 59.3 95 36.8
Medtr1g442750 Medicago truncatula HOM05D000092 ORTHO05D000042 2.4e-07 59.3 166 27.7
QL03p003333 Quercus lobata HOM05D000092 ORTHO05D000042 2.4e-07 59.3 121 28.9
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 2.4e-07 59.3 146 26.7
TPR.G25268 Trifolium pratense HOM05D000092 ORTHO05D000042 2.4e-07 59.3 167 27.5
Medtr1g051625 Medicago truncatula HOM05D000092 ORTHO05D000042 3.2e-07 58.9 168 27.4
Medtr6g464030 Medicago truncatula HOM05D000092 ORTHO05D000042 3.2e-07 58.9 170 25.9
QL03p002023 Quercus lobata HOM05D000092 ORTHO05D000042 3.2e-07 58.9 167 24.6
Duzib128G1147 Durio zibethinus HOM05D000092 ORTHO05D000042 4.2e-07 58.5 169 26.0
Gorai.007G290500 Gossypium raimondii HOM05D000092 ORTHO05D000042 4.2e-07 58.5 87 34.5
Manes.02G215120 Manihot esculenta HOM05D000092 ORTHO05D000042 4.2e-07 58.5 114 29.8
Manes.02G215325 Manihot esculenta HOM05D000092 ORTHO05D000042 4.2e-07 58.5 114 29.8
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 4.2e-07 58.5 151 25.8
Duzib177G0100 Durio zibethinus HOM05D000092 ORTHO05D000042 5.5e-07 58.2 103 34.0
Manes.02G215700 Manihot esculenta HOM05D000092 ORTHO05D000042 5.5e-07 58.2 114 29.8
Medtr0006s0240 Medicago truncatula HOM05D000092 ORTHO05D000042 5.5e-07 58.2 170 25.3
Medtr2g089975 Medicago truncatula HOM05D000092 ORTHO05D000042 5.5e-07 58.2 170 25.9
QL03p003358 Quercus lobata HOM05D000092 ORTHO05D000042 5.5e-07 58.2 145 25.5
TPR.G40521 Trifolium pratense HOM05D000092 ORTHO05D000042 5.5e-07 58.2 110 30.9
Atru.chr1.2731 Acer truncatum HOM05D000092 ORTHO05D000042 7.1e-07 57.8 147 26.5
Gorai.007G356000 Gossypium raimondii HOM05D000092 ORTHO05D000042 9.3e-07 57.4 151 25.2
Gorai.007G356300 Gossypium raimondii HOM05D000092 ORTHO05D000042 9.3e-07 57.4 151 25.8
Medtr8g059275 Medicago truncatula HOM05D000092 ORTHO05D000042 9.3e-07 57.4 168 27.4
Potri.005G062130 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.3e-07 57.4 97 30.9
Thecc.K0004100 Theobroma cacao HOM05D000092 ORTHO05D000042 9.3e-07 57.4 149 28.2
TPR.G13805 Trifolium pratense HOM05D000092 ORTHO05D000042 9.3e-07 57.4 169 27.2
Medtr1g041550 Medicago truncatula HOM05D000092 ORTHO05D000042 1.2e-06 57.0 168 27.4
Thecc.05G317900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.2e-06 57.0 147 29.9
Manes.02G215425 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-06 56.6 118 28.8
Medtr1g037010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.6e-06 56.6 167 26.9
QL01p042065 Quercus lobata HOM05D000092 ORTHO05D000042 1.6e-06 56.6 124 29.0
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 1.6e-06 56.6 147 25.9
Lalb_Chr20g0108991 Lupinus albus HOM05D000092 ORTHO05D000042 2.1e-06 56.2 95 35.8
TPR.G556 Trifolium pratense HOM05D000092 ORTHO05D000042 2.1e-06 56.2 152 27.0
Manes.02G215000 Manihot esculenta HOM05D000092 ORTHO05D000042 2.7e-06 55.8 118 28.8
Medtr2g071850 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 55.8 158 25.3
Medtr2g071870 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 55.8 158 25.3
Medtr2g071960 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 55.8 158 25.3
Medtr2g071980 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 55.8 158 25.3
Medtr2g072090 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-06 55.8 158 25.3
Thecc.K0003900 Theobroma cacao HOM05D000092 ORTHO05D000042 2.7e-06 55.8 66 43.9
TPR.G40261 Trifolium pratense HOM05D000092 ORTHO05D000042 2.7e-06 55.8 152 27.0
Medtr3g013790 Medicago truncatula HOM05D000092 ORTHO05D000042 3.5e-06 55.5 147 27.2
TPR.G13796 Trifolium pratense HOM05D000092 ORTHO05D000042 3.5e-06 55.5 107 30.8
TPR.G13803 Trifolium pratense HOM05D000092 ORTHO05D000042 3.5e-06 55.5 152 26.3
VMungo1127G0461 Vigna mungo HOM05D000092 ORTHO05D000042 3.5e-06 55.5 145 29.0
QL03p032559 Quercus lobata HOM05D000092 ORTHO05D000042 4.6e-06 55.1 109 30.3
TPR.G26638 Trifolium pratense HOM05D000092 ORTHO05D000042 4.6e-06 55.1 164 28.0
GSVIVG01023548001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.6e-06 55.1 147 26.5
COL.COLO4_13536 Corchorus olitorius HOM05D000092 ORTHO05D000042 6.0e-06 54.7 142 25.4
Gohir.D11G270300 Gossypium hirsutum HOM05D000092 ORTHO05D000042 6.0e-06 54.7 142 27.5
Manes.02G215400 Manihot esculenta HOM05D000092 ORTHO05D000042 6.0e-06 54.7 118 28.0
Manes.02G215420 Manihot esculenta HOM05D000092 ORTHO05D000042 6.0e-06 54.7 118 28.0
Medtr2g071890 Medicago truncatula HOM05D000092 ORTHO05D000042 6.0e-06 54.7 109 33.0
Thecc.05G297300 Theobroma cacao HOM05D000092 ORTHO05D000042 6.0e-06 54.7 103 29.1
Medtr2g072110 Medicago truncatula HOM05D000092 ORTHO05D000042 7.9e-06 54.3 125 28.8
TPR.G1456 Trifolium pratense HOM05D000092 ORTHO05D000042 7.9e-06 54.3 148 25.7


User provided reference genes

Program Settings