Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005219 Carpinus fangiana HOM05D000665 ORTHO05D000140 1.5e-95 352.8 181 100.0
Haze_02167 Corylus avellana HOM05D000665 ORTHO05D000140 8.2e-81 303.9 166 95.2
CiPaw.05G079800 Carya illinoinensis HOM05D000665 ORTHO05D000140 4.2e-69 265.0 166 82.5
QL11p049281 Quercus lobata HOM05D000665 ORTHO05D000140 6.7e-67 257.7 163 82.8
GSVIVG01024053001 Vitis vinifera HOM05D000665 ORTHO05D000140 4.8e-57 224.9 166 71.7
Manes.11G096000 Manihot esculenta HOM05D000665 ORTHO05D000140 2.0e-55 219.5 166 71.1
Ciclev10028943m.g Citrus clementina HOM05D000665 ORTHO05D000140 1.0e-54 217.2 166 71.7
Potri.004G172900 Populus trichocarpa HOM05D000665 ORTHO05D000140 1.9e-53 213.0 163 68.1
Thecc.02G063400 Theobroma cacao HOM05D000665 ORTHO05D000140 2.5e-53 212.6 163 71.2
Duzib132G1144 Durio zibethinus HOM05D000665 ORTHO05D000140 9.4e-53 210.7 163 70.6
COL.COLO4_17303 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.0e-51 207.2 163 69.3
Dinv41959 Davidia involucrata HOM05D000665 ORTHO05D000140 3.0e-51 205.7 163 69.9
Gorai.002G195300 Gossypium raimondii HOM05D000665 ORTHO05D000140 6.8e-51 204.5 163 67.5
Dinv04945 Davidia involucrata HOM05D000665 ORTHO05D000140 1.2e-50 203.8 166 66.9
Atru.chr5.3284 Acer truncatum HOM05D000665 ORTHO05D000140 3.7e-49 198.7 169 66.9
Cpa.g.sc37.168 Carica papaya HOM05D000665 ORTHO05D000140 6.3e-49 198.0 164 67.7
arahy.Tifrunner.gnm1.ann1.IV6FG9 Arachis hypogaea HOM05D000665 ORTHO05D000140 1.8e-48 196.4 164 67.1
Gohir.A01G166000 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.6e-47 193.4 163 66.3
arahy.Tifrunner.gnm1.ann1.PQJ7DP Arachis hypogaea HOM05D000665 ORTHO05D000140 8.6e-46 187.6 164 65.2
CANSAT25G2307 Cannabis sativa HOM05D000665 ORTHO05D000140 1.9e-45 186.4 166 64.5
Lj3g0017321 Lotus japonicus HOM05D000665 ORTHO05D000140 1.9e-45 186.4 165 64.8
Gohir.D01G157200 Gossypium hirsutum HOM05D000665 ORTHO05D000140 5.5e-45 184.9 169 61.5
Sabra04G0115000 Salix brachista HOM05D000665 ORTHO05D000140 3.9e-38 162.2 163 56.4
Hma1.2p1_0026F.1_g016430 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 3.1e-27 125.9 163 46.0
COL.COLO4_14074 Corchorus olitorius HOM05D000555 ORTHO05D000646 3.4e-26 122.5 109 57.8
Hma1.2p1_0258F.1_g104230 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 3.0e-22 109.4 163 42.3
CDE07G1776 Ceratophyllum demersum HOM05D054275 ORTHO05D000140 1.5e-13 80.5 131 37.4
Nn6g33679 Nelumbo nucifera HOM05D000665 ORTHO05D000140 1.9e-13 80.1 114 41.2
DCAR_020933 Daucus carota HOM05D000665 ORTHO05D000140 4.3e-13 79.0 59 59.3
MBI02_g21882_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 5.6e-13 78.6 152 39.5
Lj6C264T4 Lonicera japonica HOM05D000665 ORTHO05D000140 1.2e-12 77.4 145 36.6
ATR0693G289 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.8e-11 73.6 105 39.0
ATR0776G040 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.8e-11 73.6 105 40.0
CDE04G3732 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 5.2e-11 72.0 148 30.4
CDE08G0001 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 5.2e-11 72.0 148 30.4
ATR0585G101 Amborella trichopoda HOM05D000665 ORTHO05D000140 3.4e-10 69.3 117 35.9
ATR0815G057 Amborella trichopoda HOM05D034454 ORTHO05D031100 2.9e-09 66.2 94 38.3
ATR0824G130 Amborella trichopoda HOM05D034454 ORTHO05D031100 1.1e-08 64.3 167 30.5
ATR0081G006 Amborella trichopoda HOM05D000665 ORTHO05D000140 2.1e-07 60.1 122 34.4
ATR0776G057 Amborella trichopoda HOM05D000665 ORTHO05D000140 7.8e-07 58.2 103 31.1
TAR381G0257 Trochodendron aralioides HOM05D000665 ORTHO05D003147 7.8e-07 58.2 134 29.1
MBI06_g06470_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D020847 1.7e-06 57.0 48 58.3
MBI19_g03252_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 2.3e-06 56.6 89 37.1
CDE04G0042 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 8.7e-06 54.7 153 31.4
CDE07G1043 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 8.7e-06 54.7 54 46.3


User provided reference genes

Program Settings