Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 3.4e-178 628.2 325 100.0
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.1e-160 570.1 325 92.6
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 4.1e-139 498.4 336 80.4
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.5e-125 453.4 326 74.5
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.7e-125 450.7 325 68.6
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 2.2e-124 449.5 302 80.8
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 1.3e-121 440.3 336 72.0
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 2.5e-120 436.0 325 72.0
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 7.2e-120 434.5 340 70.0
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 2.7e-119 432.6 325 72.0
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 3.6e-119 432.2 325 72.6
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 8.0e-119 431.0 325 72.0
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.4e-118 430.3 329 71.7
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.8e-118 429.9 342 69.3
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.2e-117 427.2 336 70.5
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 3.4e-117 425.6 326 70.6
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.7e-116 423.3 353 67.4
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.7e-116 423.3 330 63.3
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 2.4e-115 419.5 330 71.5
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.4e-115 419.5 324 67.6
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 2.4e-115 419.5 324 67.6
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 5.4e-115 418.3 350 66.9
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 1.2e-114 417.2 320 71.9
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.7e-114 416.0 351 67.0
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 1.0e-113 414.1 361 62.6
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.3e-113 413.7 342 66.7
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.7e-113 413.3 326 66.9
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 3.8e-113 412.1 321 72.0
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 3.8e-113 412.1 352 65.1
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 3.8e-113 412.1 326 69.0
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 4.2e-112 408.7 365 64.1
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 7.2e-112 407.9 322 70.2
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 1.2e-111 407.1 330 68.2
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.7e-111 406.0 329 61.7
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 4.7e-111 405.2 327 67.3
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 6.1e-111 404.8 329 69.0
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 4.0e-110 402.1 324 65.1
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 4.0e-110 402.1 334 66.8
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.5e-109 400.2 331 64.4
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.6e-109 399.4 325 60.9
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.4e-107 393.7 326 66.9
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.8e-107 393.3 388 57.5
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 3.1e-107 392.5 328 61.0
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 9.2e-107 391.0 327 63.6
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 4.5e-106 388.7 336 58.9
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 1.7e-105 386.7 334 64.1
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 3.3e-104 382.5 326 55.8
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 4.3e-104 382.1 325 56.0
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 9.5e-104 380.9 329 62.3
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 3.6e-103 379.0 328 61.0
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 3.0e-102 375.9 317 64.0
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 8.9e-102 374.4 349 60.7
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 7.5e-101 371.3 329 62.6
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.3e-100 370.5 313 62.6
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 2.2e-100 369.8 324 64.8
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 3.2e-99 365.9 339 61.4
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 1.3e-97 360.5 320 62.8
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.7e-97 360.1 326 60.1
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 8.6e-97 357.8 337 60.8
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.2e-95 354.0 327 59.0
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.6e-95 353.6 314 60.8
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 4.0e-94 349.0 327 58.4
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.7e-92 343.6 271 64.9
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 5.4e-91 338.6 357 57.4
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 6.0e-90 335.1 317 59.9
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 1.5e-88 330.5 317 55.5
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 9.5e-88 327.8 323 53.9
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 2.8e-87 326.2 318 58.8
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 1.1e-86 324.3 329 56.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 3.1e-86 322.8 336 54.2
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 4.0e-86 322.4 313 51.1
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 6.8e-86 321.6 344 54.9
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 6.8e-86 321.6 344 54.9
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 2.6e-85 319.7 344 54.7
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 1.7e-84 317.0 367 47.7
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.9e-84 316.2 318 53.1
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 3.7e-84 315.8 350 52.9
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 3.7e-84 315.8 350 52.9
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 3.7e-84 315.8 350 52.9
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 6.4e-84 315.1 350 53.7
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 8.3e-84 314.7 350 52.9
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 1.9e-83 313.5 341 50.1
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 2.4e-83 313.2 349 53.3
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 5.4e-83 312.0 349 53.0
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.6e-82 310.5 340 52.6
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-82 310.5 320 50.9
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 1.6e-82 310.5 381 50.7
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.6e-82 308.9 320 51.2
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.8e-82 308.1 320 50.6
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 2.3e-81 306.6 378 46.6
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 3.9e-81 305.8 345 53.0
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 4.3e-80 302.4 349 52.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 2.1e-79 300.1 323 51.7
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 4.7e-79 298.9 326 54.3
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 1.1e-78 297.7 387 48.3
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 5.2e-78 295.4 323 52.0
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.4e-77 292.4 329 51.1
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 7.6e-77 291.6 334 54.2
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.9e-77 291.2 320 49.4
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 3.8e-76 289.3 317 52.1
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.1e-75 285.8 344 45.3
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 7.8e-74 281.6 262 62.6
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 6.2e-71 271.9 300 50.0
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 4.4e-69 265.8 337 47.5
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 7.6e-69 265.0 320 50.0
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.2e-66 257.7 313 45.0
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 1.1e-64 251.1 327 45.6
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.3e-60 237.7 206 67.5
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 1.7e-60 237.3 316 42.1
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 3.8e-60 236.1 328 44.2
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 6.2e-55 218.8 356 42.1
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 9.0e-54 214.9 133 75.9
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 2.2e-52 210.3 129 75.2
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.9e-51 207.2 395 35.7
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.5e-50 203.0 235 48.1
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.6e-50 202.6 327 37.0
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.0e-49 201.4 321 40.5
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 9.0e-46 188.3 156 65.4
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 4.5e-37 159.5 161 49.7
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 2.2e-31 140.6 314 30.9
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 5.9e-29 132.5 314 29.9
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 7.2e-27 125.6 301 29.9
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.2e-26 124.8 118 50.0
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 2.7e-26 123.6 135 44.4
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 7.4e-24 115.5 323 29.4
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.7e-23 114.4 111 50.5
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 8.5e-20 102.1 198 40.9
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 6.1e-18 95.9 165 38.2
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 7.2e-11 72.4 49 65.3
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.0e-08 64.3 88 42.0
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 4.8e-07 59.7 115 33.9
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 3.1e-06 57.0 108 34.3
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 7.0e-06 55.8 109 34.9


User provided reference genes

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