Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 7.7e-64 246.9 118 100.0
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 7.3e-62 240.4 118 96.6
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 2.8e-61 238.4 117 96.6
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 2.4e-57 225.3 118 89.0
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 7.0e-57 223.8 118 89.0
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 9.2e-57 223.4 114 90.4
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 1.3e-55 219.5 116 87.9
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 3.9e-55 218.0 116 87.1
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 1.5e-54 216.1 116 85.3
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 2.5e-54 215.3 116 85.3
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 2.5e-54 215.3 118 83.9
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 4.3e-54 214.5 118 85.6
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 1.2e-53 213.0 118 83.1
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 1.2e-53 213.0 118 82.2
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 1.2e-53 213.0 113 86.7
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 1.6e-53 212.6 118 84.7
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 1.6e-53 212.6 114 86.0
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 2.1e-53 212.2 118 83.9
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 2.1e-53 212.2 118 83.1
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 2.1e-53 212.2 116 84.5
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.6e-53 211.5 118 83.1
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 6.2e-53 210.7 116 83.6
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 8.0e-53 210.3 114 83.3
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 8.0e-53 210.3 118 81.4
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 8.0e-53 210.3 118 82.2
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 1.0e-52 209.9 118 81.4
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 1.4e-52 209.5 118 81.4
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.4e-52 209.5 118 82.2
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 1.4e-52 209.5 117 81.2
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 1.8e-52 209.1 115 83.5
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 1.8e-52 209.1 118 81.4
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 2.3e-52 208.8 117 82.9
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.3e-52 208.8 118 81.4
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.3e-52 208.8 118 80.5
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.3e-52 208.8 118 80.5
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 2.3e-52 208.8 118 83.1
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 2.3e-52 208.8 113 83.2
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 2.3e-52 208.8 118 82.2
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 3.1e-52 208.4 137 73.7
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 3.1e-52 208.4 115 84.3
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 4.0e-52 208.0 115 82.6
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 6.8e-52 207.2 114 82.5
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 1.2e-51 206.5 116 81.9
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 1.5e-51 206.1 116 81.9
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.0e-51 205.7 116 81.0
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.0
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.6e-51 205.3 116 81.0
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 3.4e-51 204.9 113 84.1
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 82.8
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 82.8
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 82.8
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 82.8
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 3.4e-51 204.9 112 84.8
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 4.4e-51 204.5 114 82.5
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 4.4e-51 204.5 110 86.4
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 5.8e-51 204.1 110 85.5
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 7.5e-51 203.8 116 82.8
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 7.5e-51 203.8 116 81.0
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 9.8e-51 203.4 116 81.9
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 9.8e-51 203.4 112 83.9
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 9.8e-51 203.4 115 82.6
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 1.3e-50 203.0 116 81.9
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 1.3e-50 203.0 116 81.9
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 81.9
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 81.9
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 2.2e-50 202.2 116 82.8
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 2.9e-50 201.8 117 79.5
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.9e-50 201.8 120 78.3
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 2.9e-50 201.8 116 81.0
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 4.9e-50 201.1 114 82.5
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 4.9e-50 201.1 116 81.0
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 80.2
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 80.2
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 80.2
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 80.2
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 80.2
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 79.3
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 81.9
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.4e-49 199.5 115 79.1
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 3.2e-49 198.4 117 79.5
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 5.4e-49 197.6 115 80.9
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 7.0e-49 197.2 118 80.5
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 9.2e-49 196.8 115 79.1
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 1.2e-48 196.4 116 79.3
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 1.2e-48 196.4 117 78.6
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 1.6e-48 196.1 113 78.8
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 2.7e-48 195.3 118 78.0
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 2.7e-48 195.3 117 76.9
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 2.7e-48 195.3 115 77.4
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 4.6e-48 194.5 114 78.9
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 6.0e-48 194.1 116 75.9
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 6.0e-48 194.1 118 77.1
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 7.8e-48 193.7 114 77.2
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.3e-47 193.0 111 78.4
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.3e-47 193.0 111 78.4
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 1.3e-47 193.0 115 76.5
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 6.6e-47 190.7 115 75.7
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 1.1e-46 189.9 113 74.3
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 7.3e-46 187.2 114 75.4
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 1.2e-45 186.4 118 74.6
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 1.2e-45 186.4 182 53.8
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 2.1e-45 185.7 111 72.1
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 2.8e-45 185.3 151 62.9
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 4.7e-45 184.5 111 73.9
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 1.8e-44 182.6 102 82.4
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 4.0e-44 181.4 104 80.8
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 5.2e-44 181.0 116 73.3
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 5.2e-44 181.0 105 77.1
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 1.2e-43 179.9 96 88.5
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 2.0e-43 179.1 110 75.5
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 1.3e-42 176.4 113 69.9
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 3.7e-42 174.9 105 73.3
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.1e-41 173.3 113 70.8
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 2.4e-41 172.2 102 76.5
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 2.4e-41 172.2 113 69.9
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 1.2e-40 169.9 103 72.8
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 2.3e-39 165.6 100 74.0
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 5.1e-39 164.5 105 74.3
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 6.2e-37 157.5 124 63.7
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 3.4e-35 151.8 91 80.2
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 2.9e-34 148.7 115 64.3
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 4.9e-34 147.9 119 63.0
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 9.2e-33 143.7 114 58.8
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 2.1e-32 142.5 116 62.1
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 7.8e-32 140.6 112 56.2
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 5.1e-31 137.9 111 57.7
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 1.5e-30 136.3 85 75.3
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 2.0e-27 125.9 60 91.7
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 1.3e-26 123.2 107 52.3
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-25 119.4 114 50.9
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 2.7e-24 115.5 57 86.0
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 6.0e-24 114.4 58 84.5
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 8.7e-23 110.5 103 52.4
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 1.5e-22 109.8 105 50.5
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.9e-22 109.4 85 64.7
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 4.3e-22 108.2 60 81.7
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 5.6e-22 107.8 60 78.3
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 4.5e-19 98.2 113 47.8
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 9.9e-19 97.1 96 49.0
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 2.4e-17 92.4 83 54.2
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 3.2e-17 92.0 83 59.0
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 2.1e-16 89.4 53 81.1
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 1.0e-15 87.0 55 76.4
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 4.3e-14 81.6 55 69.1
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 6.9e-12 74.3 46 71.7
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 1.5e-11 73.2 57 66.7
VMungo0540G1094 Vigna mungo HOM05D003030 ORTHO05D006417 8.4e-10 67.4 84 50.0
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 1.6e-08 63.2 97 34.0


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