Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.2e-158 560.1 263 100.0
Cfa005104 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.3e-84 316.2 325 55.1
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 2.8e-82 309.3 267 59.9
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 4.5e-80 302.0 223 65.0
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 4.5e-80 302.0 223 65.0
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 3.0e-76 289.3 242 58.3
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-67 260.8 231 58.4
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 1.7e-66 256.9 230 58.3
Cfa021346 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-52 210.3 225 48.4
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-51 207.2 246 46.7
Haze_21168 Corylus avellana HOM05D008391 ORTHO05D009743 8.1e-45 184.9 238 43.3
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.4e-43 179.5 243 42.8
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.4e-42 175.3 243 42.8
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.7e-40 169.9 235 41.7
Cfa017030 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.6e-40 169.1 238 41.6
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-37 161.0 266 41.0
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 2.0e-35 153.7 249 40.2
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-31 141.4 231 39.8
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-29 134.4 212 40.6
Haze_13848 Corylus avellana HOM05D008391 ORTHO05D009743 1.2e-29 134.4 192 39.6
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-28 131.0 246 37.8
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-27 127.5 251 35.1
Cfa003685 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.4e-27 125.9 232 35.3
Cfa007250 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.6e-27 125.2 232 35.8
Cfa007193 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.9e-26 122.5 243 33.7
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 8.4e-26 121.7 238 37.4
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 1.9e-25 120.6 278 33.1
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 9.3e-25 118.2 277 32.1
Cfa017076 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.1e-24 117.1 177 40.7
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 3.5e-24 116.3 189 39.2
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 1.7e-23 114.0 233 34.3
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.6e-23 112.1 269 32.7
Haze_19940 Corylus avellana HOM05D008391 ORTHO05D009743 8.7e-23 111.7 236 34.7
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-22 110.2 180 40.0
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 9.6e-22 108.2 237 36.3
Cfa015317 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.1e-20 104.8 247 30.8
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.8e-20 104.0 232 33.6
Cfa017042 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.1e-20 103.2 237 31.2
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 5.3e-20 102.4 228 33.3
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 5.3e-20 102.4 225 31.6
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-19 100.9 233 34.3
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 4.5e-19 99.4 246 31.7
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-18 97.8 229 32.8
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 2.2e-18 97.1 209 34.0
Haze_19842 Corylus avellana HOM05D008391 ORTHO05D009743 3.8e-18 96.3 277 30.0
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 4.9e-18 95.9 243 32.5
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 4.9e-18 95.9 243 32.5
Cfa007631 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.4e-17 92.4 120 44.2
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 9.3e-17 91.7 200 33.5
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 1.6e-16 90.9 238 31.5
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 2.1e-16 90.5 182 37.4
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-15 87.0 183 33.3
Cfa017751 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.0e-15 86.7 149 36.2
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 1.5e-14 84.3 189 36.0
Haze_13950 Corylus avellana HOM05D008391 ORTHO05D009743 5.6e-14 82.4 106 44.3
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 7.4e-14 82.0 259 30.9
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-13 81.3 206 30.1
Haze_14976 Corylus avellana HOM05D001643 ORTHO05D001580 2.1e-13 80.5 162 34.0
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 2.1e-13 80.5 245 31.4
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 4.8e-13 79.3 273 26.7
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 6.2e-13 79.0 213 28.6
Cfa007135 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.4e-12 77.8 166 33.1
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.8e-12 77.4 182 33.5
QL11p036670 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-12 77.4 228 28.1
QL11p036893 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-12 77.4 228 28.1
CSS0008723 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 3.1e-12 76.6 218 28.4
QL11p036882 Quercus lobata HOM05D010066 ORTHO05D009743 3.1e-12 76.6 228 27.6
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 4.0e-12 76.3 208 29.8
Cfa003301 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.0e-11 73.9 112 37.5
Haze_24274 Corylus avellana HOM05D008391 ORTHO05D009743 1.7e-10 70.9 245 31.0
PSO675G5947 Papaver somniferum HOM05D000249 ORTHO05D000206 6.4e-10 68.9 108 34.3
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 3.2e-09 66.6 207 28.5
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 4.2e-09 66.2 240 27.5
Peaxi162Scf00359g00005 Petunia axillaris HOM05D000249 ORTHO05D000206 5.5e-09 65.9 199 29.1
CiPaw.03G134300 Carya illinoinensis HOM05D000249 ORTHO05D000206 9.3e-09 65.1 109 35.8
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 9.3e-09 65.1 99 35.4
EL10Ac6g14755 Beta vulgaris HOM05D000249 ORTHO05D000206 1.6e-08 64.3 110 30.0
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 2.1e-08 63.9 198 29.8
CSS0028906 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 2.1e-08 63.9 198 27.3
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 2.7e-08 63.5 208 26.0
PSO541G4415 Papaver somniferum HOM05D000249 ORTHO05D000206 2.7e-08 63.5 109 34.9
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 3.5e-08 63.2 84 38.1
Hma1.2p1_0375F.1_g138740 Hydrangea macrophylla HOM05D000249 ORTHO05D000206 4.6e-08 62.8 108 33.3
Nitab4.5_0000904g0030 Nicotiana tabacum HOM05D000249 ORTHO05D000206 7.9e-08 62.0 182 29.7
CANSAT01G1486 Cannabis sativa HOM05D000249 ORTHO05D000206 1.3e-07 61.2 108 33.3
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-07 60.8 275 26.5
Actinidia16043 Actinidia chinensis HOM05D000249 ORTHO05D000206 3.0e-07 60.1 108 29.6
Solyc04g051870.3 Solanum lycopersicum HOM05D000249 ORTHO05D000206 3.0e-07 60.1 205 27.3
Sopen04g023200 Solanum pennellii HOM05D000249 ORTHO05D000206 3.0e-07 60.1 205 27.3
PGSC0003DMG400016578 Solanum tuberosum HOM05D000249 ORTHO05D000206 3.0e-07 60.1 205 26.8
Cfa016866 Carpinus fangiana HOM05D027064 ORTHO05D009743 5.1e-07 59.3 175 30.3
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 6.7e-07 58.9 128 33.6
CANSAT01G0241 Cannabis sativa HOM05D000249 ORTHO05D000206 8.7e-07 58.5 68 44.1
Nitab4.5_0005995g0010 Nicotiana tabacum HOM05D000249 ORTHO05D000206 1.5e-06 57.8 179 28.5
Rhsim10G0150200 Rhododendron simsii HOM05D000249 ORTHO05D000206 1.9e-06 57.4 109 29.4
PSO675G8073 Papaver somniferum HOM05D000249 ORTHO05D000206 2.5e-06 57.0 207 29.0
Sc10g0007200 Simmondsia chinensis HOM05D000249 ORTHO05D000206 2.5e-06 57.0 114 31.6
TAR381G1098 Trochodendron aralioides HOM05D000249 ORTHO05D000206 4.3e-06 56.2 68 36.8
Cfa016758 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.6e-06 55.8 84 42.9
Rhsim06G0070500 Rhododendron simsii HOM05D018081 ORTHO05D026100 5.6e-06 55.8 213 24.4


User provided reference genes

Program Settings