Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005072 Carpinus fangiana HOM05D007387 ORTHO05D009321 1.3e-79 300.1 195 100.0
CiPaw.06G131100 Carya illinoinensis HOM05D007387 ORTHO05D009321 3.8e-31 139.0 185 55.1
QL11p045571 Quercus lobata HOM05D007387 ORTHO05D009321 3.9e-28 129.0 213 50.2
Ca_20916_v3 Cicer arietinum L. HOM05D007387 ORTHO05D009321 3.1e-25 119.4 196 39.8
Phvul.011G041100 Phaseolus vulgaris HOM05D007387 ORTHO05D009321 1.2e-24 117.5 182 42.9
Glyma.12G039000 Glycine max HOM05D007387 ORTHO05D009321 5.8e-24 115.2 199 48.2
Lalb_Chr19g0138881 Lupinus albus HOM05D007387 ORTHO05D009321 5.8e-24 115.2 189 48.1
Prupe.8G088200 Prunus persica HOM05D007387 ORTHO05D009321 8.4e-23 111.3 202 50.5
Atru.chr5.3107 Acer truncatum HOM05D007387 ORTHO05D009321 1.9e-22 110.2 185 53.0
ClCG02G004690 Citrullus lanatus HOM05D007387 ORTHO05D009321 1.9e-22 110.2 189 40.7
Medtr4g071120 Medicago truncatula HOM05D007387 ORTHO05D009321 1.9e-22 110.2 185 50.8
TPR.G30501 Trifolium pratense HOM05D000711 ORTHO05D000545 3.2e-22 109.4 192 40.1
VMungo1127G0459 Vigna mungo HOM05D007387 ORTHO05D009321 4.2e-22 109.0 178 50.0
Glyma.11G113100 Glycine max HOM05D007387 ORTHO05D009321 5.4e-22 108.6 195 48.7
Psat7g182600 Pisum sativum HOM05D007387 ORTHO05D009321 5.4e-22 108.6 190 41.1
Manes.11G087600 Manihot esculenta HOM05D007387 ORTHO05D009321 9.3e-22 107.8 203 42.4
Thecc.02G078400 Theobroma cacao HOM05D007387 ORTHO05D009321 1.2e-21 107.5 177 41.8
Gohir.A04G124100 Gossypium hirsutum HOM05D007387 ORTHO05D009321 1.6e-21 107.1 61 78.7
Cpa.g.sc139.28 Carica papaya HOM05D007387 ORTHO05D009321 2.7e-21 106.3 195 39.0
Lj3g0012874 Lotus japonicus HOM05D007387 ORTHO05D009321 3.5e-21 105.9 177 42.4
Gohir.D04G166200 Gossypium hirsutum HOM05D007387 ORTHO05D009321 4.6e-21 105.5 61 78.7
Gorai.012G154600 Gossypium raimondii HOM05D007387 ORTHO05D009321 4.6e-21 105.5 61 78.7
MELO3C013435.2 Cucumis melo HOM05D007387 ORTHO05D009321 1.0e-20 104.4 181 35.9
CsaV3_7G000220 Cucumis sativus L. HOM05D007387 ORTHO05D009321 1.3e-20 104.0 181 35.4
Sed0010335 Sechium edule HOM05D007387 ORTHO05D009321 2.3e-20 103.2 194 40.2
FAN15G3112 Fragaria x ananassa HOM05D007387 ORTHO05D009321 3.0e-20 102.8 61 77.0
Sed0000236 Sechium edule HOM05D007387 ORTHO05D009321 3.0e-20 102.8 191 42.4
FAN27G1365 Fragaria x ananassa HOM05D007387 ORTHO05D009321 3.9e-20 102.4 61 77.0
FvH4_2g10040 Fragaria vesca HOM05D007387 ORTHO05D009321 5.1e-20 102.1 61 77.0
FAN24G0663 Fragaria x ananassa HOM05D007387 ORTHO05D009321 5.1e-20 102.1 61 77.0
MD10G1066200 Malus domestica HOM05D007387 ORTHO05D009321 5.1e-20 102.1 198 43.9
TWI31G1242 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 6.7e-20 101.7 199 36.7
arahy.Tifrunner.gnm1.ann1.WH0Y0U Arachis hypogaea HOM05D007387 ORTHO05D009321 1.5e-19 100.5 59 76.3
TWI79G0383 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 4.3e-19 99.0 173 38.2
Haze_02310 Corylus avellana HOM05D007387 ORTHO05D009321 5.6e-19 98.6 82 95.1
RcHm_v2.0_Chr6g0266971 Rosa chinensis HOM05D007387 ORTHO05D009321 5.6e-19 98.6 59 76.3
Duzib132G0100 Durio zibethinus HOM05D007387 ORTHO05D009321 2.1e-18 96.7 165 37.0
Sabra04G0107500 Salix brachista HOM05D007387 ORTHO05D009321 2.1e-18 96.7 180 37.2
Gohir.A12G041900 Gossypium hirsutum HOM05D007387 ORTHO05D009321 4.8e-18 95.5 164 45.1
Lalb_Chr03g0025431 Lupinus albus HOM05D007387 ORTHO05D009321 4.8e-18 95.5 166 42.2
Sabra09G0094000 Salix brachista HOM05D007387 ORTHO05D009321 4.8e-18 95.5 180 37.8
Actinidia00563 Actinidia chinensis HOM05D001785 ORTHO05D001933 1.1e-17 94.4 58 72.4
Potri.009G121700 Populus trichocarpa HOM05D007387 ORTHO05D009321 2.4e-17 93.2 58 72.4
THA.LOC104807296 Tarenaya hassleriana HOM05D007387 ORTHO05D009321 3.1e-17 92.8 59 74.6
Potri.004G160700 Populus trichocarpa HOM05D007387 ORTHO05D009321 6.9e-17 91.7 58 72.4
Gohir.D12G030300 Gossypium hirsutum HOM05D007387 ORTHO05D009321 9.0e-17 91.3 63 69.8
Eucgr.I01309 Eucalyptus grandis HOM05D007387 ORTHO05D009321 1.2e-16 90.9 56 75.0
MD05G1058600 Malus domestica HOM05D007387 ORTHO05D009321 1.2e-16 90.9 59 71.2
Aa31LG2G15890 Aethionema arabicum HOM05D007387 ORTHO05D009321 2.6e-16 89.7 64 67.2
Duzib248G1112 Durio zibethinus HOM05D007387 ORTHO05D009321 3.4e-16 89.4 57 71.9
Ciclev10029309m.g Citrus clementina HOM05D007387 ORTHO05D009321 4.5e-16 89.0 59 69.5
CANSAT11G0211 Cannabis sativa HOM05D007387 ORTHO05D009321 5.8e-16 88.6 62 71.0
PGR142G2532 Punica granatum HOM05D007387 ORTHO05D009321 9.9e-16 87.8 56 71.4
Sp7g32420 Schrenkiella parvula HOM05D007387 ORTHO05D009321 9.9e-16 87.8 64 64.1
Dinv42018 Davidia involucrata HOM05D007387 ORTHO05D009321 1.3e-15 87.4 57 70.2
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.3e-15 87.4 59 69.5
Actinidia11742 Actinidia chinensis HOM05D007387 ORTHO05D009321 2.2e-15 86.7 57 70.2
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 4.9e-15 85.5 59 67.8
arahy.Tifrunner.gnm1.ann1.TWZZ0X Arachis hypogaea HOM05D007387 ORTHO05D009321 6.4e-15 85.1 191 41.4
CAN.G170.83 Capsicum annuum HOM05D007387 ORTHO05D009321 8.4e-15 84.7 56 69.6
vmacro02067 Vaccinium macrocarpon HOM05D007387 ORTHO05D009321 1.4e-14 84.0 57 68.4
A01p03860 Brassica napus HOM05D007387 ORTHO05D009321 1.9e-14 83.6 65 64.6
PGSC0003DMG400030970 Solanum tuberosum HOM05D007387 ORTHO05D009321 4.2e-14 82.4 56 67.9
Solyc01g110150.2 Solanum lycopersicum HOM05D007387 ORTHO05D009321 7.1e-14 81.6 56 67.9
Thhalv10026183m.g Eutrema salsugineum HOM05D007387 ORTHO05D009321 9.3e-14 81.3 64 62.5
Sc18g0005240 Simmondsia chinensis HOM05D007387 ORTHO05D009321 9.3e-14 81.3 56 62.5
BcaNung04919 Brassica carinata HOM05D007387 ORTHO05D009321 1.2e-13 80.9 65 61.5
CARHR106690 Cardamine hirsuta HOM05D007387 ORTHO05D009321 1.6e-13 80.5 61 59.0
ECA236G2541 Erigeron canadensis HOM05D007387 ORTHO05D009321 1.6e-13 80.5 61 63.9
BcaNung04916 Brassica carinata HOM05D007387 ORTHO05D009321 2.1e-13 80.1 65 61.5
Cc02_g17100 Coffea canephora HOM05D007387 ORTHO05D009321 2.1e-13 80.1 191 38.7
TWI75G1034 Tripterygium wilfordii HOM05D007387 ORTHO05D009321 2.1e-13 80.1 55 65.5
AL7G16570 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 2.7e-13 79.7 65 63.1
HanXRQChr16g0505141 Helianthus annuus HOM05D007387 ORTHO05D009321 4.6e-13 79.0 56 64.3
Oeu008575.1 Olea europaea HOM05D007387 ORTHO05D009321 6.0e-13 78.6 59 59.3
Sopen01g052310 Solanum pennellii HOM05D007387 ORTHO05D009321 7.9e-13 78.2 55 65.5
HanXRQChr04g0127721 Helianthus annuus HOM05D007387 ORTHO05D009321 1.0e-12 77.8 57 64.9
Lsat_1_v5_gn_7_91901 Lactuca sativa HOM05D007387 ORTHO05D009321 3.0e-12 76.3 55 65.5
BcaNung00681 Brassica carinata HOM05D007387 ORTHO05D009321 1.1e-11 74.3 65 63.1
C01p04170 Brassica napus HOM05D007387 ORTHO05D009321 1.1e-11 74.3 65 63.1
BolC1t00405H Brassica oleracea HOM05D007387 ORTHO05D009321 1.1e-11 74.3 65 63.1
BraA01t00373Z Brassica rapa HOM05D007387 ORTHO05D009321 1.1e-11 74.3 65 63.1
Carub.0007s0565 Capsella rubella HOM05D007387 ORTHO05D009321 1.1e-11 74.3 62 59.7
DCAR_003650 Daucus carota HOM05D007387 ORTHO05D009321 1.1e-11 74.3 56 60.7
DCAR_009554 Daucus carota HOM05D007387 ORTHO05D009321 3.3e-11 72.8 56 62.5
FAN15G0178 Fragaria x ananassa HOM05D007387 ORTHO05D009321 4.3e-11 72.4 168 32.7
Peaxi162Scf00003g00073 Petunia axillaris HOM05D007387 ORTHO05D009321 4.3e-11 72.4 53 64.2
Ah.01g018920 Amaranthus hybridus HOM05D001785 ORTHO05D001933 5.6e-11 72.0 56 53.6
AT4G34630 Arabidopsis thaliana HOM05D007387 ORTHO05D009321 1.6e-10 70.5 54 68.5
FAN20G0098 Fragaria x ananassa HOM05D007387 ORTHO05D009321 2.1e-10 70.1 49 67.3
FAN21G1657 Fragaria x ananassa HOM05D007387 ORTHO05D009321 6.2e-10 68.6 49 65.3
AL3G52630 Arabidopsis lyrata HOM05D007387 ORTHO05D009321 8.2e-10 68.2 60 56.7
FAN25G2925 Fragaria x ananassa HOM05D007387 ORTHO05D009321 8.2e-10 68.2 48 66.7
EL10Ac9g21673 Beta vulgaris HOM05D007387 ORTHO05D009321 3.1e-09 66.2 59 55.9
Oeu055620.1 Olea europaea HOM05D007387 ORTHO05D009321 4.0e-09 65.9 58 51.7
CARHR242940 Cardamine hirsuta HOM05D007387 ORTHO05D009321 5.3e-09 65.5 62 59.7
Actinidia12738 Actinidia chinensis HOM05D007387 ORTHO05D009321 1.0e-07 61.2 57 56.1
Actinidia27864 Actinidia chinensis HOM05D007387 ORTHO05D009321 1.0e-07 61.2 57 56.1
Hma1.2p1_0066F.1_g035940 Hydrangea macrophylla HOM05D007387 ORTHO05D009321 1.0e-07 61.2 56 53.6
Carub.0003s3021 Capsella rubella HOM05D007387 ORTHO05D009321 2.9e-07 59.7 60 55.0
Peaxi162Scf00016g00025 Petunia axillaris HOM05D007387 ORTHO05D009321 5.5e-06 55.5 52 61.5


User provided reference genes

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