Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.1e-72 276.6 146 100.0
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.1e-72 276.6 146 100.0
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 7.8e-66 253.8 146 89.0
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 2.5e-64 248.8 147 89.8
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 5.6e-64 247.7 147 89.1
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 7.3e-64 247.3 146 89.0
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 9.6e-64 246.9 146 89.0
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 2.1e-63 245.7 146 88.4
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 2.8e-63 245.4 146 87.7
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 3.6e-63 245.0 146 87.7
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 4.8e-63 244.6 144 86.8
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 6.2e-63 244.2 147 88.4
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 6.2e-63 244.2 146 87.0
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 8.1e-63 243.8 146 86.3
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 8.1e-63 243.8 147 88.4
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 8.1e-63 243.8 146 86.3
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.1e-62 243.4 144 86.1
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.1e-62 243.4 144 86.1
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 1.8e-62 242.7 146 86.3
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.4e-62 242.3 144 85.4
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 2.4e-62 242.3 147 89.1
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 3.1e-62 241.9 145 87.6
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.0e-62 241.5 144 85.4
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 6.9e-62 240.7 146 87.0
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 6.9e-62 240.7 147 86.4
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 6.9e-62 240.7 146 85.6
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.0e-62 240.4 146 87.0
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.0e-62 240.4 146 87.0
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 9.0e-62 240.4 146 87.0
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 9.0e-62 240.4 146 88.4
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 9.0e-62 240.4 147 83.7
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 1.2e-61 240.0 146 88.4
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.0e-61 239.2 147 86.4
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.0e-61 239.2 147 86.4
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.6e-61 238.8 146 83.6
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.6e-61 238.8 146 83.6
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.4e-61 238.4 146 84.9
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 4.5e-61 238.0 146 84.9
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.6e-61 237.3 147 86.4
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 7.6e-61 237.3 147 86.4
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 1.3e-60 236.5 146 87.0
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.7e-60 236.1 146 85.6
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.2e-60 235.7 144 83.3
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.9e-60 235.3 147 85.7
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.1e-59 233.4 146 84.9
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 4.2e-59 231.5 146 80.8
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 7.1e-59 230.7 146 82.2
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 9.3e-59 230.3 146 84.2
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 3.5e-58 228.4 147 83.0
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 3.5e-58 228.4 146 82.9
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 4.6e-58 228.0 147 84.4
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 6.0e-58 227.6 146 80.8
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 6.0e-58 227.6 147 82.3
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 1.8e-57 226.1 147 82.3
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 1.8e-57 226.1 147 81.6
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.8e-57 226.1 146 80.8
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.3e-57 225.7 149 81.9
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.0e-57 225.3 147 79.6
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 3.0e-57 225.3 146 79.5
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 6.7e-57 224.2 147 81.0
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 1.5e-56 223.0 147 81.6
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 1.5e-56 223.0 147 81.0
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 2.5e-56 222.2 144 81.2
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 3.3e-56 221.9 155 80.0
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 3.3e-56 221.9 146 80.1
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 5.6e-56 221.1 146 79.5
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 5.6e-56 221.1 146 80.8
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 5.6e-56 221.1 148 80.4
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 1.3e-55 219.9 146 79.5
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 1.6e-55 219.5 147 77.6
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 2.8e-55 218.8 147 81.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 3.7e-55 218.4 146 79.5
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.8e-55 218.0 146 79.5
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.8e-55 218.0 146 78.8
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.8e-55 218.0 145 78.6
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.4e-54 216.5 146 79.5
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 2.4e-54 215.7 149 77.9
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 2.4e-54 215.7 146 80.8
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 5.3e-54 214.5 137 81.8
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 3.4e-53 211.8 150 80.0
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 5.8e-53 211.1 139 80.6
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 9.9e-53 210.3 147 76.9
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 2.9e-52 208.8 147 77.6
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 2.9e-52 208.8 150 75.3
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.4e-52 207.6 150 74.7
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.4e-52 207.6 150 74.7
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.1e-51 206.8 147 76.9
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.4e-51 206.5 149 75.2
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 7.1e-51 204.1 152 74.3
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 7.9e-50 200.7 146 74.7
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 7.9e-50 200.7 152 77.0
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.0e-49 200.3 150 70.7
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.0e-49 200.3 157 70.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.0e-49 198.7 146 74.0
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.1e-49 198.0 146 74.0
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 1.1e-48 196.8 152 72.4
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.5e-48 196.4 153 69.9
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 1.9e-48 196.1 154 70.1
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 4.3e-48 194.9 153 70.6
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 5.6e-48 194.5 115 88.7
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 7.4e-48 194.1 154 70.1
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 8.2e-47 190.7 147 71.4
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 2.4e-46 189.1 147 70.7
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 2.2e-44 182.6 155 67.1
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 5.5e-43 177.9 139 71.2
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 5.5e-43 177.9 139 71.2
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 9.3e-43 177.2 112 84.8
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.6e-42 176.4 149 64.4
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 2.1e-42 176.0 161 62.1
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 4.3e-40 168.3 105 83.8
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 7.4e-40 167.5 109 81.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 2.8e-39 165.6 147 65.3
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 6.3e-39 164.5 149 63.1
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 8.2e-39 164.1 139 69.1
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 5.3e-38 161.4 100 82.0
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 5.3e-38 161.4 150 61.3
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.2e-37 160.2 147 63.3
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 1.1e-35 153.7 145 61.4
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 6.1e-34 147.9 133 63.2
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 1.9e-32 142.9 89 85.4
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 6.9e-30 134.4 103 68.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 6.9e-30 134.4 103 68.9
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 1.3e-28 130.2 152 53.3
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 3.8e-28 128.6 84 78.6
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 4.2e-27 125.2 131 51.9
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 1.6e-26 123.2 151 49.0
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 1.7e-23 113.2 166 46.4
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 5.9e-21 104.8 78 69.2
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 2.2e-20 102.8 79 65.8
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 8.5e-20 100.9 79 62.0
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 7.2e-19 97.8 88 60.2
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 7.2e-19 97.8 148 44.6
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 1.4e-17 93.6 144 45.8
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.8e-17 93.2 147 40.8
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.0e-17 92.4 71 64.8
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.0e-17 92.4 71 64.8
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.4e-16 88.6 69 63.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 5.7e-16 88.2 69 63.8
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 5.7e-16 88.2 71 63.4
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.4e-16 87.8 69 62.3
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.3e-15 87.0 69 59.4
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 5.9e-13 78.2 72 55.6
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.7e-12 76.6 72 54.2
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 2.7e-10 69.3 70 48.6
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 6.1e-10 68.2 72 51.4
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.4e-09 67.0 125 41.6
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 4.8e-07 58.5 51 62.7
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 8.2e-07 57.8 72 41.7


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