Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004950 Carpinus fangiana HOM05D008520 ORTHO05D009890 6.4e-32 140.2 74 100.0
Cfa004952 Carpinus fangiana HOM05D008520 ORTHO05D009890 5.6e-28 127.1 74 93.2
Haze_02458 Corylus avellana HOM05D008520 ORTHO05D009890 5.8e-25 117.1 76 86.8
Haze_02459 Corylus avellana HOM05D008520 ORTHO05D009890 1.0e-21 106.3 71 85.9
CiPaw.06G139100 Carya illinoinensis HOM05D012043 ORTHO05D009890 1.0e-13 79.7 77 63.6
QL11p039275 Quercus lobata HOM05D008520 ORTHO05D009890 3.1e-10 68.2 75 61.3
Ciclev10029754m.g Citrus clementina HOM05D008520 ORTHO05D009890 1.2e-09 66.2 74 56.8
Manes.17G096900 Manihot esculenta HOM05D012043 ORTHO05D009890 1.5e-09 65.9 74 56.8
Phvul.011G050000 Phaseolus vulgaris HOM05D008520 ORTHO05D009890 2.0e-09 65.5 73 57.5
Potri.004G148200 Populus trichocarpa HOM05D008520 ORTHO05D009890 5.8e-09 63.9 72 59.7
Ca_12478_v3 Cicer arietinum L. HOM05D008520 ORTHO05D009890 1.0e-08 63.2 76 53.9
Ciclev10029756m.g Citrus clementina HOM05D008520 ORTHO05D009890 1.7e-08 62.4 72 55.6
Glyma.07G163300 Glycine max HOM05D008520 ORTHO05D009890 3.8e-08 61.2 78 57.7
PGSC0003DMG400025953 Solanum tuberosum HOM05D013381 ORTHO05D016352 6.5e-08 60.5 75 46.7
COL.COLO4_17779 Corchorus olitorius HOM05D008520 ORTHO05D009890 8.4e-08 60.1 73 50.7
Thecc.02G029000 Theobroma cacao HOM05D008520 ORTHO05D009890 8.4e-08 60.1 72 55.6
Solyc01g109090.2 Solanum lycopersicum HOM05D013381 ORTHO05D016352 1.4e-07 59.3 73 43.8
Lj3g0002198 Lotus japonicus HOM05D008520 ORTHO05D009890 1.9e-07 58.9 76 53.9
Gohir.D01G172800 Gossypium hirsutum HOM05D008520 ORTHO05D009890 2.5e-07 58.5 73 52.1
Gorai.002G214400 Gossypium raimondii HOM05D008520 ORTHO05D009890 2.5e-07 58.5 73 52.1
Sopen01g051290 Solanum pennellii HOM05D013381 ORTHO05D016352 2.5e-07 58.5 73 43.8
Glyma.11G123300 Glycine max HOM05D008520 ORTHO05D009890 9.3e-07 56.6 73 54.8
Glyma.20G008300 Glycine max HOM05D008520 ORTHO05D009890 1.2e-06 56.2 74 55.4
Gohir.A01G181700 Gossypium hirsutum HOM05D008520 ORTHO05D009890 2.1e-06 55.5 73 50.7
Solyc01g109100.2 Solanum lycopersicum HOM05D013381 ORTHO05D016352 3.5e-06 54.7 79 44.3
Glyma.12G048000 Glycine max HOM05D008520 ORTHO05D009890 4.6e-06 54.3 76 47.4
Medtr1g034290 Medicago truncatula HOM05D008520 ORTHO05D009890 6.0e-06 53.9 76 50.0
PGSC0003DMG400025954 Solanum tuberosum HOM05D013381 ORTHO05D016352 6.0e-06 53.9 77 42.9


User provided reference genes

Program Settings