Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004867 Carpinus fangiana HOM05D008942 ORTHO05D009202 6.6e-51 204.1 135 100.0
Haze_05107 Corylus avellana HOM05D008942 ORTHO05D009202 1.9e-29 132.9 139 79.9
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.1e-17 92.8 131 47.3
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 7.6e-15 84.3 129 45.0
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 3.2e-13 79.0 132 43.2
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 7.1e-13 77.8 91 49.5
Cpa.g.sc1096.1 Carica papaya HOM05D008942 ORTHO05D009202 5.1e-11 71.6 89 48.3
CiPaw.08G085000 Carya illinoinensis HOM05D008942 ORTHO05D009202 6.7e-11 71.2 89 50.6
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 1.9e-10 69.7 87 48.3
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 2.5e-10 69.3 88 50.0
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 3.3e-10 68.9 132 42.4
MD17G1279600 Malus domestica HOM05D008942 ORTHO05D009202 4.3e-10 68.6 95 41.1
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 5.6e-10 68.2 87 52.9
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 2.1e-09 66.2 86 43.0
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 2.1e-09 66.2 87 49.4
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 6.2e-09 64.7 132 37.1
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 1.1e-08 63.9 86 41.9
Atru.chr5.920 Acer truncatum HOM05D008942 ORTHO05D009202 1.8e-08 63.2 72 50.0
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 5.3e-08 61.6 95 44.2
Duzib138G1053 Durio zibethinus HOM05D008942 ORTHO05D009202 9.0e-08 60.8 139 36.7
CSS0006203 Camellia sinensis var. sinensis HOM05D009264 ORTHO05D009202 3.4e-07 58.9 106 50.0
Nn4g25438 Nelumbo nucifera HOM05D008942 ORTHO05D009202 1.7e-06 56.6 88 40.9
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 2.2e-06 56.2 80 36.2
Ciclev10022668m.g Citrus clementina HOM05D008942 ORTHO05D009202 2.9e-06 55.8 61 49.2
TWI59G1203 Tripterygium wilfordii HOM05D008942 ORTHO05D009202 2.9e-06 55.8 72 44.4
Actinidia35505 Actinidia chinensis HOM05D009264 ORTHO05D009202 3.8e-06 55.5 60 50.0
Oeu024972.1 Olea europaea HOM05D038384 ORTHO05D009202 4.9e-06 55.1 71 45.1
Actinidia01668 Actinidia chinensis HOM05D009264 ORTHO05D009202 8.4e-06 54.3 68 39.7


User provided reference genes

Program Settings