Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004866 Carpinus fangiana HOM05D008942 ORTHO05D009202 7.0e-46 187.6 148 100.0
Haze_05106 Corylus avellana HOM05D008942 ORTHO05D009202 6.1e-34 147.9 148 80.4
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 1.3e-15 87.0 97 56.7
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 2.2e-15 86.3 97 57.7
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 6.2e-10 68.2 101 43.6
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 1.4e-09 67.0 107 46.7
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 1.2e-08 63.9 111 44.1
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 2.0e-08 63.2 103 42.7
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 3.4e-08 62.4 101 41.6
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 5.8e-08 61.6 105 43.8
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 9.9e-08 60.8 107 43.9
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.2e-07 59.7 113 42.5
Phvul.007G211500 Phaseolus vulgaris HOM05D024167 ORTHO05D009202 2.9e-07 59.3 95 34.7
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 2.9e-07 59.3 110 40.0
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 8.4e-07 57.8 109 44.0
Glyma.02G009400 Glycine max HOM05D024167 ORTHO05D009202 1.1e-06 57.4 97 37.1
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 3.2e-06 55.8 99 42.4
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 7.1e-06 54.7 109 38.5


User provided reference genes

Program Settings