Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004825 Carpinus fangiana HOM05D001147 ORTHO05D000823 1.2e-71 273.1 143 100.0
Cfa004826 Carpinus fangiana HOM05D001147 ORTHO05D000823 1.9e-56 222.6 117 97.4
Haze_10471 Corylus avellana HOM05D001147 ORTHO05D000823 3.0e-54 215.3 144 80.6
CiPaw.06G159200 Carya illinoinensis HOM05D001147 ORTHO05D000823 3.5e-26 122.1 118 57.6
Prupe.8G073500 Prunus persica HOM05D001147 ORTHO05D000823 7.3e-16 87.8 120 46.7
Thecc.02G126800 Theobroma cacao HOM05D001147 ORTHO05D000823 7.3e-16 87.8 78 60.3
COL.COLO4_32417 Corchorus olitorius HOM05D001147 ORTHO05D000823 1.2e-15 87.0 128 44.5
Atru.chr6.1317 Acer truncatum HOM05D001147 ORTHO05D000823 2.1e-15 86.3 67 62.7
Manes.07G043300 Manihot esculenta HOM05D001147 ORTHO05D000823 1.1e-14 84.0 140 42.1
Potri.009G078800 Populus trichocarpa HOM05D001147 ORTHO05D000823 3.4e-13 79.0 132 41.7
Duzib132G0186 Durio zibethinus HOM05D001147 ORTHO05D000823 3.7e-12 75.5 128 42.2
Nitab4.5_0002750g0010 Nicotiana tabacum HOM05D001147 ORTHO05D000823 6.4e-12 74.7 137 40.9
Gohir.D13G048800 Gossypium hirsutum HOM05D001147 ORTHO05D000823 1.9e-11 73.2 127 42.5
Gorai.013G054500 Gossypium raimondii HOM05D001147 ORTHO05D000823 1.9e-11 73.2 127 42.5
CAN.G504.77 Capsicum annuum HOM05D001147 ORTHO05D000823 3.2e-11 72.4 127 40.9
Nitab4.5_0005908g0060 Nicotiana tabacum HOM05D001147 ORTHO05D000823 5.4e-11 71.6 135 38.5
Gohir.A13G050000 Gossypium hirsutum HOM05D001147 ORTHO05D000823 4.6e-10 68.6 127 41.7
CAN.G782.28 Capsicum annuum HOM05D001147 ORTHO05D000823 3.0e-09 65.9 126 41.3
Nn5g29818 Nelumbo nucifera HOM05D003076 ORTHO05D000823 3.9e-09 65.5 74 44.6
Manes.10G095700 Manihot esculenta HOM05D001147 ORTHO05D000823 6.6e-09 64.7 125 36.8
CSS0032070 Camellia sinensis var. sinensis HOM05D001147 ORTHO05D000823 8.6e-09 64.3 127 37.8
Dinv08984 Davidia involucrata HOM05D000026 ORTHO05D000127 1.5e-08 63.5 95 44.2
CANSAT54G2207 Cannabis sativa HOM05D001147 ORTHO05D000823 9.5e-08 60.8 110 41.8
ClCG10G009680 Citrullus lanatus HOM05D001147 ORTHO05D000823 9.5e-08 60.8 145 38.6
CsaV3_4G014720 Cucumis sativus L. HOM05D003076 ORTHO05D000823 1.6e-07 60.1 137 36.5
MBI16_g27903_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D003220 1.6e-07 60.1 75 49.3
Peaxi162Scf00299g00036 Petunia axillaris HOM05D003076 ORTHO05D000823 2.8e-07 59.3 113 38.9
Solyc01g106100.2 Solanum lycopersicum HOM05D001147 ORTHO05D000823 2.8e-07 59.3 148 36.5
Sopen01g048490 Solanum pennellii HOM05D001147 ORTHO05D000823 2.8e-07 59.3 148 36.5
PGSC0003DMG400010672 Solanum tuberosum HOM05D001147 ORTHO05D000823 1.1e-06 57.4 152 36.2
MSTRG.16625 Avicennia marina HOM05D001147 ORTHO05D000823 2.4e-06 56.2 117 35.0


User provided reference genes

Program Settings