Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 1.3e-88 329.7 163 100.0
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 6.8e-34 147.9 170 48.8
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 5.4e-31 138.3 174 48.3
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 1.7e-29 133.3 175 47.4
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 3.6e-27 125.6 169 45.6
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 1.5e-25 120.2 168 46.4
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 2.4e-23 112.8 168 43.5
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 7.0e-23 111.3 169 40.2
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 3.5e-22 109.0 136 47.8
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 4.5e-22 108.6 176 41.5
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 4.5e-22 108.6 175 41.1
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 2.9e-21 105.9 172 40.1
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 2.9e-21 105.9 175 40.0
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 6.6e-21 104.8 175 40.0
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 6.6e-21 104.8 176 41.5
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 6.6e-21 104.8 176 39.2
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 1.1e-20 104.0 174 42.0
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.1e-20 104.0 177 38.4
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 4.3e-20 102.1 145 44.1
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 5.6e-20 101.7 176 39.2
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 5.6e-20 101.7 177 39.5
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.6e-20 101.7 169 37.9
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 5.6e-20 101.7 178 40.4
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 9.5e-20 100.9 177 39.0
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.2e-19 100.5 175 37.7
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 1.6e-19 100.1 173 39.3
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 2.1e-19 99.8 175 40.6
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 8.0e-19 97.8 163 38.7
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.0e-18 97.4 168 38.7
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 1.0e-18 97.4 168 38.7
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 5.2e-18 95.1 168 41.1
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 6.8e-18 94.7 168 37.5
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 8.9e-18 94.4 168 39.3
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 5.8e-17 91.7 168 37.5
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 9.8e-17 90.9 173 38.2
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.9e-16 89.4 176 37.5
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 3.7e-16 89.0 173 38.2
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 4.9e-16 88.6 176 36.4
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 6.4e-16 88.2 180 35.0
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.3e-16 87.8 133 42.1
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 4.1e-15 85.5 163 38.0
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 9.2e-15 84.3 163 37.4
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.2e-14 84.0 135 40.0
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 1.6e-14 83.6 146 39.0
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.6e-14 83.6 142 40.1
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 1.6e-14 83.6 166 37.3
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 3.5e-14 82.4 146 38.4
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 3.5e-14 82.4 163 36.8
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.6e-14 82.0 121 45.5
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 4.6e-14 82.0 143 42.7
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 6.0e-14 81.6 163 36.8
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 1.7e-13 80.1 178 34.3
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 3.9e-13 79.0 167 35.3
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 5.0e-13 78.6 186 34.4
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 1.1e-12 77.4 184 34.2
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.3e-12 75.9 140 36.4
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 7.3e-12 74.7 164 36.0
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 9.5e-12 74.3 163 31.9
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.2e-11 73.9 100 48.0
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.6e-11 72.4 164 35.4
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 6.2e-11 71.6 176 34.1
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.4e-10 70.5 186 34.4
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.3e-10 69.7 120 38.3
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.6e-09 66.2 164 34.1
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.5e-09 64.7 146 32.2
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 1.3e-08 63.9 147 34.0
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.7e-08 63.5 168 29.8
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 3.2e-07 59.3 169 30.2
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 7.1e-07 58.2 118 35.6


User provided reference genes

Program Settings