Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.0e-200 702.2 345 100.0
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.1e-187 659.8 356 92.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 5.0e-180 634.4 342 92.1
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 5.0e-180 634.4 342 92.1
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 8.1e-154 547.4 345 77.4
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.6e-146 523.1 344 74.1
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 3.6e-146 521.9 344 74.7
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 9.9e-144 513.8 344 73.5
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 6.2e-138 494.6 359 67.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 5.3e-137 491.5 345 69.0
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 3.8e-135 485.3 344 67.7
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 3.9e-132 475.3 346 66.8
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.7e-132 474.2 346 65.3
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.1e-131 473.8 351 67.2
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.6e-130 469.9 351 66.1
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.2e-130 467.6 344 66.3
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 8.2e-130 467.6 341 68.9
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.1e-129 467.2 364 62.6
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.8e-129 466.5 351 65.5
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 2.4e-129 466.1 345 66.7
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 2.6e-128 462.6 343 67.6
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 7.6e-128 461.1 347 66.6
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 7.6e-128 461.1 344 65.4
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 2.9e-127 459.1 347 66.0
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.9e-126 456.4 345 64.9
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 9.3e-126 454.1 344 63.7
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.2e-125 453.8 346 63.9
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 2.1e-125 453.0 351 64.7
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 7.9e-125 451.1 343 65.6
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.8e-124 449.9 350 61.4
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.0e-124 449.1 322 66.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 3.9e-124 448.7 345 62.3
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 8.7e-124 447.6 345 63.5
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 8.7e-124 447.6 345 63.8
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 8.7e-124 447.6 344 62.8
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.1e-123 447.2 346 64.7
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.9e-123 446.4 353 62.0
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.9e-123 446.4 346 63.0
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 3.3e-123 445.7 353 62.3
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 9.7e-123 444.1 328 65.5
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 9.7e-123 444.1 344 62.5
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.3e-122 443.7 352 63.9
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 6.3e-122 441.4 345 63.5
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 6.3e-122 441.4 343 63.6
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 8.2e-122 441.0 327 64.5
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 3.1e-121 439.1 352 63.1
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.2e-120 437.2 352 63.1
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.5e-120 436.8 341 61.0
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.6e-120 436.0 347 62.0
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.2e-119 433.0 343 62.7
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 5.0e-119 431.8 348 61.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 8.5e-119 431.0 311 70.7
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-118 430.3 364 58.8
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.2e-118 429.1 328 64.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 4.2e-118 428.7 349 61.3
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 5.5e-118 428.3 349 62.5
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 1.6e-117 426.8 341 61.0
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.6e-117 426.8 328 62.8
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 3.9e-116 422.2 345 60.6
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.5e-115 420.2 345 59.1
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.4e-115 418.7 275 71.3
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 4.4e-115 418.7 344 59.9
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 5.7e-115 418.3 352 57.7
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.4e-113 412.9 339 59.9
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.6e-112 409.5 352 58.0
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 6.5e-111 404.8 326 62.0
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.5e-110 402.9 352 57.1
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 4.2e-110 402.1 352 56.2
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.2e-109 400.6 347 56.8
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 6.1e-109 398.3 324 62.0
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.4e-108 397.1 344 59.0
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 4.4e-107 392.1 336 58.6
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 5.7e-107 391.7 341 57.8
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 5.7e-107 391.7 344 58.7
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.3e-106 390.6 352 55.1
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 2.2e-106 389.8 369 51.8
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 3.7e-106 389.0 350 55.4
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 8.2e-106 387.9 383 53.0
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 1.1e-105 387.5 348 54.3
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 1.1e-105 387.5 348 54.3
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 3.1e-105 386.0 352 55.1
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 1.6e-104 383.6 350 54.3
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 6.5e-103 378.3 372 51.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.2e-102 375.6 342 56.4
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.2e-101 374.0 272 69.1
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 4.0e-100 369.0 257 75.5
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.5e-96 355.5 255 69.4
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 8.5e-95 351.3 250 70.0
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.5e-94 350.5 253 66.8
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.5e-94 349.7 344 52.0
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.5e-91 340.5 310 57.7
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 1.5e-91 340.5 330 53.6
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.2e-88 330.9 332 52.1
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.3e-87 327.4 341 51.3
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.9e-86 323.6 347 50.4
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 2.8e-85 319.7 248 62.9
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 4.0e-84 315.8 341 50.7
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.7e-82 310.5 304 56.6
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.0e-79 301.2 352 48.0
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 5.0e-79 298.9 260 58.5
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.4e-76 290.8 264 54.5
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 2.0e-72 276.9 239 53.6
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 1.1e-70 271.2 215 64.7
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 8.0e-69 265.0 310 49.4
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 7.0e-65 251.9 243 56.4
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.6e-64 250.8 187 61.0
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.7e-63 247.3 350 40.9
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 6.4e-50 202.2 131 65.6
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 5.6e-46 189.1 100 89.0
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 3.3e-38 163.3 130 55.4
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.5e-35 154.5 311 34.4
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 5.1e-31 139.4 146 51.4
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 7.1e-25 119.0 217 34.1
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-17 95.1 69 65.2
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 1.0e-15 88.6 73 54.8
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 9.0e-12 75.5 106 35.8
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 2.2e-10 70.9 83 56.6


User provided reference genes

Program Settings