Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 6.5e-240 833.6 396 100.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.2e-206 723.0 394 87.1
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.1e-190 669.1 643 58.3
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 3.6e-190 668.3 397 80.1
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.4e-189 666.4 396 81.3
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.6e-188 662.1 396 81.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 4.4e-188 661.4 386 81.3
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 3.7e-187 658.3 392 80.6
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 4.9e-187 657.9 391 80.3
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 4.1e-186 654.8 392 79.6
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.7e-185 652.1 391 78.8
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 6.0e-185 651.0 382 82.5
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.8e-185 650.6 410 75.9
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.1e-183 646.7 378 81.5
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.1e-183 646.7 348 85.3
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.5e-183 646.4 351 85.2
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.9e-183 646.0 375 82.1
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.3e-183 645.2 397 78.3
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 5.6e-183 644.4 381 81.4
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 7.3e-183 644.0 398 77.1
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 9.5e-183 643.7 397 78.1
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 2.8e-182 642.1 396 78.0
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.8e-182 642.1 389 78.7
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 3.6e-182 641.7 387 79.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 6.2e-182 641.0 384 80.7
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 1.2e-180 636.7 327 89.0
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.2e-180 636.7 364 81.3
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 2.6e-180 635.6 391 78.8
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 5.8e-180 634.4 354 83.6
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.7e-179 632.9 396 76.0
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 2.2e-179 632.5 330 88.8
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.2e-179 632.5 363 81.3
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 3.8e-179 631.7 358 80.2
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 6.4e-179 630.9 363 81.8
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 6.4e-179 630.9 394 77.4
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 8.4e-179 630.6 402 76.4
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 8.4e-179 630.6 351 82.9
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.4e-178 629.8 389 77.1
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.4e-178 629.8 400 76.0
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 4.1e-178 628.2 332 86.1
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 7.1e-178 627.5 350 83.4
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.6e-177 626.3 377 79.8
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 4.6e-177 624.8 328 88.4
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 4.6e-177 624.8 389 76.6
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 4.6e-177 624.8 392 76.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.8e-177 624.0 376 79.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 7.8e-177 624.0 383 78.3
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 2.3e-176 622.5 386 76.4
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.5e-175 619.8 350 83.7
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.0e-172 609.4 327 85.3
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.4e-172 608.6 401 73.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.1e-170 603.6 390 72.6
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.1e-170 603.6 385 75.1
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.4e-170 602.4 357 80.7
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 4.2e-170 601.7 353 80.5
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.6e-169 599.7 391 72.6
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 4.6e-169 598.2 376 75.3
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 6.0e-169 597.8 316 86.1
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 6.0e-169 597.8 391 73.4
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 7.8e-169 597.4 376 74.7
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.3e-168 596.7 336 81.8
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 1.3e-168 596.7 376 75.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 3.0e-168 595.5 347 79.8
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 5.1e-168 594.7 391 73.4
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 5.1e-168 594.7 324 83.3
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 8.7e-168 594.0 320 84.1
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 8.7e-168 594.0 404 72.0
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 1.9e-167 592.8 378 75.1
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.5e-167 592.4 351 78.9
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 3.3e-167 592.0 328 82.6
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 4.3e-167 591.7 369 74.0
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 4.3e-167 591.7 320 82.8
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 5.6e-167 591.3 391 71.9
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 7.3e-167 590.9 369 74.0
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 3.1e-165 585.5 410 69.8
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 6.9e-165 584.3 369 73.7
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 2.6e-164 582.4 382 73.0
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.4e-162 576.6 328 81.1
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.9e-162 576.2 398 68.6
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 4.2e-162 575.1 373 72.1
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 5.4e-162 574.7 355 78.0
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 9.3e-162 573.9 379 71.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.2e-161 573.5 317 81.4
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 6.0e-161 571.2 405 67.4
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.3e-160 570.1 428 68.5
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.5e-156 555.1 326 75.8
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.0e-152 543.9 297 81.8
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 3.9e-152 542.0 354 72.3
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 3.9e-152 542.0 333 74.2
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 2.9e-147 525.8 284 82.0
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.5e-143 513.5 311 73.3
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.1e-141 505.4 324 73.8
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 5.3e-141 505.0 315 70.5
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 2.2e-139 499.6 284 78.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 8.5e-139 497.7 315 69.8
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.9e-138 496.5 324 67.3
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 2.8e-126 456.1 319 64.6
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.0e-119 433.3 248 78.6
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 5.5e-106 388.7 252 73.8
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 7.2e-106 388.3 266 70.3
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 6.3e-102 375.2 224 79.9
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 2.0e-100 370.2 278 65.1
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.0e-92 343.6 360 45.6
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.6e-82 308.9 314 47.1
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.6e-82 308.9 313 46.6
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 8.0e-81 305.1 347 42.1
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 4.6e-76 289.3 163 81.0
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.3e-59 234.6 193 59.6
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.8e-57 226.1 126 79.4
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.4e-56 224.6 343 39.1
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 2.2e-54 217.2 186 55.4
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.9e-50 204.1 204 54.4
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 4.0e-48 196.4 134 70.1
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.4e-45 188.0 196 44.4
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.4e-32 144.1 84 72.6
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 3.1e-24 117.1 57 91.2
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.8e-16 91.3 79 54.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 9.4e-13 79.0 62 61.3
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 7.9e-12 75.9 39 76.9
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.7e-07 59.3 41 61.0
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 2.2e-06 57.8 100 34.0
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 6.5e-06 56.2 147 25.2


User provided reference genes

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