Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004725 Carpinus fangiana HOM05D004771 ORTHO05D005565 2.8e-90 335.5 198 100.0
Haze_04594 Corylus avellana HOM05D000399 ORTHO05D000304 2.0e-80 302.8 219 84.5
Haze_10334 Corylus avellana HOM05D004771 ORTHO05D005565 7.1e-78 294.3 204 84.8
QL11p028495 Quercus lobata HOM05D004771 ORTHO05D005565 3.7e-58 228.8 202 74.8
QL09p037751 Quercus lobata HOM05D004771 ORTHO05D005565 2.4e-57 226.1 201 71.1
CiPaw.05G182000 Carya illinoinensis HOM05D004771 ORTHO05D005565 1.5e-56 223.4 197 73.6
GSVIVG01037017001 Vitis vinifera HOM05D004771 ORTHO05D005565 2.9e-47 192.6 203 60.1
GSVIVG01022390001 Vitis vinifera HOM05D004771 ORTHO05D005565 7.2e-46 188.0 209 65.1
CSS0030116 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 2.7e-45 186.0 205 66.8
MD10G1112800 Malus domestica HOM05D004771 ORTHO05D005565 2.7e-45 186.0 224 59.8
Prupe.8G152600 Prunus persica HOM05D004771 ORTHO05D005565 2.3e-44 183.0 204 65.2
Ciclev10029331m.g Citrus clementina HOM05D004771 ORTHO05D005565 3.9e-44 182.2 201 59.2
Ciclev10029295m.g Citrus clementina HOM05D004771 ORTHO05D005565 1.1e-43 180.6 203 61.6
Duzib132G0558 Durio zibethinus HOM05D004771 ORTHO05D005565 1.5e-43 180.3 202 64.4
Atru.chr4.2044 Acer truncatum HOM05D004771 ORTHO05D005565 2.0e-43 179.9 201 66.7
Manes.10G087700 Manihot esculenta HOM05D004771 ORTHO05D005565 5.7e-43 178.3 197 64.0
CSS0010443 Camellia sinensis var. sinensis HOM05D004771 ORTHO05D005565 1.3e-42 177.2 206 65.5
MD05G1109000 Malus domestica HOM05D004771 ORTHO05D005565 4.8e-42 175.3 231 58.0
Glyma.20G137100 Glycine max HOM05D004771 ORTHO05D005565 5.9e-40 168.3 207 62.3
Cpa.g.c27001.4 Carica papaya HOM05D004771 ORTHO05D005565 7.7e-40 167.9 201 60.2
Sed0002941 Sechium edule HOM05D004771 ORTHO05D005565 7.7e-40 167.9 207 60.4
Thecc.02G032500 Theobroma cacao HOM05D004771 ORTHO05D005565 1.0e-39 167.5 201 59.2
TAR628G1069 Trochodendron aralioides HOM05D004771 ORTHO05D005565 1.0e-39 167.5 200 63.0
COL.COLO4_17806 Corchorus olitorius HOM05D004771 ORTHO05D005565 2.9e-39 166.0 140 67.1
Dinv44219 Davidia involucrata HOM05D000703 ORTHO05D000633 6.5e-39 164.9 193 65.8
ClCG10G002170 Citrullus lanatus HOM05D004771 ORTHO05D005565 1.1e-38 164.1 205 61.0
Gohir.D01G171700 Gossypium hirsutum HOM05D004771 ORTHO05D005565 1.2e-37 160.6 206 58.7
Actinidia33010 Actinidia chinensis HOM05D004771 ORTHO05D005565 4.7e-37 158.7 204 62.3
PGR142G3141 Punica granatum HOM05D004771 ORTHO05D005565 4.7e-37 158.7 199 57.8
Eucgr.I02508 Eucalyptus grandis HOM05D004771 ORTHO05D005565 7.9e-37 157.9 202 58.9
TWI23G0030 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 7.9e-37 157.9 199 60.3
CANSAT56G2106 Cannabis sativa HOM05D004771 ORTHO05D005565 1.0e-36 157.5 124 72.6
MELO3C013897.2 Cucumis melo HOM05D004771 ORTHO05D005565 1.0e-36 157.5 138 63.8
Dinv22681 Davidia involucrata HOM05D004771 ORTHO05D005565 1.4e-36 157.1 121 71.1
Phvul.007G048400 Phaseolus vulgaris HOM05D004771 ORTHO05D005565 2.3e-36 156.4 203 59.6
TWI14G0977 Tripterygium wilfordii HOM05D004771 ORTHO05D005565 2.3e-36 156.4 127 68.5
COL.COLO4_26627 Corchorus olitorius HOM05D004771 ORTHO05D005565 3.0e-36 156.0 127 66.9
Potri.015G035700 Populus trichocarpa HOM05D004771 ORTHO05D005565 5.1e-36 155.2 136 66.2
TAR625G0649 Trochodendron aralioides HOM05D004771 ORTHO05D005565 5.1e-36 155.2 198 58.6
Eucgr.C02425 Eucalyptus grandis HOM05D004771 ORTHO05D005565 6.7e-36 154.8 207 57.0
MSTRG.6635 Avicennia marina HOM05D004771 ORTHO05D005565 8.8e-36 154.5 206 53.4
AUR62009845 Chenopodium quinoa HOM05D004771 ORTHO05D005565 2.0e-35 153.3 139 63.3
Gorai.002G213200 Gossypium raimondii HOM05D004771 ORTHO05D005565 2.6e-35 152.9 206 57.3
Aqoxy5G00826 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 3.3e-35 152.5 203 51.7
AUR62038158 Chenopodium quinoa HOM05D004771 ORTHO05D005565 3.3e-35 152.5 139 63.3
Gohir.A01G180600 Gossypium hirsutum HOM05D004771 ORTHO05D005565 7.4e-35 151.4 129 65.1
CsaV3_3G002260 Cucumis sativus L. HOM05D004771 ORTHO05D005565 9.7e-35 151.0 143 62.2
Psat6g007560 Pisum sativum HOM05D004771 ORTHO05D005565 1.7e-34 150.2 206 52.4
Aqoxy3G04244 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 2.2e-34 149.8 199 50.8
arahy.Tifrunner.gnm1.ann1.DYSV1F Arachis hypogaea HOM05D004771 ORTHO05D005565 2.8e-34 149.4 200 49.5
CANSAT25G0049 Cannabis sativa HOM05D004771 ORTHO05D005565 4.8e-34 148.7 132 64.4
FvH4_2g02960 Fragaria vesca HOM05D004771 ORTHO05D005565 4.8e-34 148.7 135 60.7
Lalb_Chr02g0144821 Lupinus albus HOM05D004771 ORTHO05D005565 8.2e-34 147.9 204 54.9
Aqoxy3G02689_Aqoxy3G02690 Aquilegia oxysepala HOM05D001377 ORTHO05D005565 1.4e-33 147.1 195 55.4
FAN24G0749 Fragaria x ananassa HOM05D004771 ORTHO05D005565 1.4e-33 147.1 134 60.4
Aqoxy3G02687 Aquilegia oxysepala HOM05D004771 ORTHO05D005565 1.8e-33 146.7 195 53.3
CANSAT25G2974 Cannabis sativa HOM05D004771 ORTHO05D005565 3.1e-33 146.0 132 63.6
Nn2g15843 Nelumbo nucifera HOM05D004771 ORTHO05D005565 5.3e-33 145.2 200 54.0
RhsimUnG0159200 Rhododendron simsii HOM05D004771 ORTHO05D005565 5.3e-33 145.2 208 58.2
Lj6g0021608 Lotus japonicus HOM05D004771 ORTHO05D005565 7.0e-33 144.8 208 52.9
arahy.Tifrunner.gnm1.ann1.8327BB Arachis hypogaea HOM05D004771 ORTHO05D005565 1.2e-32 144.1 200 50.0
EL10Ac7g16361 Beta vulgaris HOM05D004771 ORTHO05D005565 1.2e-32 144.1 138 59.4
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 2.0e-32 143.3 202 53.0
THA.LOC104816989 Tarenaya hassleriana HOM05D004771 ORTHO05D005565 2.0e-32 143.3 132 63.6
Lj5g0002463 Lotus japonicus HOM05D004771 ORTHO05D005565 3.5e-32 142.5 139 58.3
RcHm_v2.0_Chr6g0247751 Rosa chinensis HOM05D004771 ORTHO05D005565 4.5e-32 142.1 200 56.5
Migut.M00048 Erythranthe guttata HOM05D004771 ORTHO05D005565 5.9e-32 141.7 134 61.9
Sc12g0010390 Simmondsia chinensis HOM05D004771 ORTHO05D005565 5.9e-32 141.7 178 57.9
Nitab4.5_0000575g0030 Nicotiana tabacum HOM05D004771 ORTHO05D005565 1.0e-31 141.0 197 52.3
PSO170G1452 Papaver somniferum HOM05D004771 ORTHO05D005565 2.2e-31 139.8 140 58.6
TPR.G31901 Trifolium pratense HOM05D004771 ORTHO05D005565 2.2e-31 139.8 214 48.1
Lj8C288T1 Lonicera japonica HOM05D004771 ORTHO05D005565 5.0e-31 138.7 210 54.8
TPR.G12006 Trifolium pratense HOM05D004771 ORTHO05D005565 6.5e-31 138.3 142 59.2
Nn4g25002 Nelumbo nucifera HOM05D004771 ORTHO05D005565 1.5e-30 137.1 195 58.5
VMungo0720G1115 Vigna mungo HOM05D004771 ORTHO05D005565 1.9e-30 136.7 186 56.5
Nitab4.5_0002078g0010 Nicotiana tabacum HOM05D004771 ORTHO05D005565 4.2e-30 135.6 136 60.3
PSO017G4159 Papaver somniferum HOM05D004771 ORTHO05D005565 2.1e-29 133.3 132 59.8
Medtr1g009780 Medicago truncatula HOM05D004771 ORTHO05D005565 6.1e-29 131.7 202 52.0
Cc02_g28780 Coffea canephora HOM05D004771 ORTHO05D005565 1.0e-28 131.0 202 56.9
Lj8P345T14 Lonicera japonica HOM05D004771 ORTHO05D005565 1.4e-28 130.6 140 55.0
MBI13_g09224_MAGBIO Magnolia biondii HOM05D004771 ORTHO05D005565 1.4e-28 130.6 203 50.7
PSO170G1616 Papaver somniferum HOM05D004771 ORTHO05D005565 1.4e-28 130.6 197 53.3
Aa31LG2G7800 Aethionema arabicum HOM05D004771 ORTHO05D005565 1.8e-28 130.2 134 56.7
SGA_v2.0_scaffold181G39690 Striga asiatica HOM05D004771 ORTHO05D005565 4.0e-28 129.0 116 64.7
DCAR_027620 Daucus carota HOM05D004771 ORTHO05D005565 6.7e-28 128.3 220 45.5
PSO528G0234 Papaver somniferum HOM05D004771 ORTHO05D005565 6.7e-28 128.3 197 52.3
Hund20829 Selenicereus undatus HOM05D004771 ORTHO05D005565 1.5e-27 127.1 206 52.4
Thhalv10019781m.g Eutrema salsugineum HOM05D004771 ORTHO05D005565 7.5e-27 124.8 125 59.2
Peaxi162Scf00170g00041 Petunia axillaris HOM05D004771 ORTHO05D005565 2.8e-26 122.9 204 49.5
PGSC0003DMG400028994 Solanum tuberosum HOM05D004771 ORTHO05D005565 4.8e-26 122.1 201 44.8
DCAR_007735 Daucus carota HOM05D004771 ORTHO05D005565 1.1e-25 120.9 215 48.4
Ca_12871_v3 Cicer arietinum L. HOM05D004771 ORTHO05D005565 1.4e-25 120.6 186 53.2
unitig_899.g15063 Utricularia gibba HOM05D004771 ORTHO05D005565 1.4e-25 120.6 142 54.9
PGSC0003DMG400005017 Solanum tuberosum HOM05D004771 ORTHO05D005565 2.4e-25 119.8 135 56.3
Sopen04g019850 Solanum pennellii HOM05D004771 ORTHO05D005565 3.1e-25 119.4 142 54.2
CAN.G490.38 Capsicum annuum HOM05D004771 ORTHO05D005565 5.3e-25 118.6 142 54.2
Solyc04g049660.3 Solanum lycopersicum HOM05D004771 ORTHO05D005565 7.0e-25 118.2 142 53.5
Rhsim09G0033000 Rhododendron simsii HOM05D004771 ORTHO05D005565 2.0e-24 116.7 196 55.1
ATR0736G167 Amborella trichopoda HOM05D004771 ORTHO05D005565 2.7e-24 116.3 128 53.1
CAN.G630.7 Capsicum annuum HOM05D004771 ORTHO05D005565 4.5e-24 115.5 142 52.8
ECA248G2169 Erigeron canadensis HOM05D004771 ORTHO05D005565 7.7e-24 114.8 208 49.5
AL2G31090 Arabidopsis lyrata HOM05D004771 ORTHO05D005565 2.2e-23 113.2 131 53.4
CDE02G0226 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 5.0e-23 112.1 199 46.2
HanXRQChr05g0160091 Helianthus annuus HOM05D004771 ORTHO05D005565 1.5e-22 110.5 208 47.1
Medtr3g080910 Medicago truncatula HOM05D004771 ORTHO05D005565 2.5e-22 109.8 152 55.9
BcaC02g09527 Brassica carinata HOM05D004771 ORTHO05D005565 3.2e-22 109.4 121 53.7
C04p43760 Brassica napus HOM05D004771 ORTHO05D005565 3.2e-22 109.4 121 53.7
BolC4t25958H Brassica oleracea HOM05D004771 ORTHO05D005565 3.2e-22 109.4 121 53.7
CDE05G2657 Ceratophyllum demersum HOM05D004771 ORTHO05D005565 4.2e-22 109.0 136 49.3
Lsat_1_v5_gn_1_71561 Lactuca sativa HOM05D007128 ORTHO05D009059 5.5e-22 108.6 107 58.9
AT1G71430 Arabidopsis thaliana HOM05D004771 ORTHO05D005565 9.4e-22 107.8 132 53.0
Manes.07G051000 Manihot esculenta HOM05D004771 ORTHO05D005565 2.7e-21 106.3 147 61.9
vmacro05477 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 3.6e-21 105.9 155 52.9
A02p17330 Brassica napus HOM05D004771 ORTHO05D005565 4.7e-21 105.5 121 53.7
BraA02t06780Z Brassica rapa HOM05D004771 ORTHO05D005565 4.7e-21 105.5 121 53.7
BcaB05g24668 Brassica carinata HOM05D004771 ORTHO05D005565 6.1e-21 105.1 121 53.7
BcaC03g15291 Brassica carinata HOM05D004771 ORTHO05D005565 6.1e-21 105.1 121 52.9
C02p28980 Brassica napus HOM05D004771 ORTHO05D005565 6.1e-21 105.1 121 52.9
BraA07t31335Z Brassica rapa HOM05D004771 ORTHO05D005565 8.0e-21 104.8 138 50.7
BolC2t08948H Brassica oleracea HOM05D004771 ORTHO05D005565 1.4e-20 104.0 119 52.9
arahy.Tifrunner.gnm1.ann1.ATP5C9 Arachis hypogaea HOM05D004771 ORTHO05D005565 1.2e-19 100.9 85 65.9
SEGI_32093 Sequoiadendron giganteum HOM05D004771 ORTHO05D005565 2.6e-19 99.8 144 47.2
C06p45590 Brassica napus HOM05D004771 ORTHO05D005565 3.4e-19 99.4 123 51.2
BolC6t39610H Brassica oleracea HOM05D004771 ORTHO05D005565 3.4e-19 99.4 123 51.2
Glyma.10G254400 Glycine max HOM05D004771 ORTHO05D005565 3.4e-19 99.4 121 52.9
A07p37720 Brassica napus HOM05D004771 ORTHO05D005565 5.7e-19 98.6 125 50.4
CARHR291250 Cardamine hirsuta HOM05D004771 ORTHO05D005565 9.8e-19 97.8 122 50.8
Carub.0002s1828 Capsella rubella HOM05D004771 ORTHO05D005565 1.3e-18 97.4 200 42.0
SalBow7G1175 Salvia bowleyana HOM05D004771 ORTHO05D005565 1.3e-18 97.4 147 47.6
Sp5g26590 Schrenkiella parvula HOM05D004771 ORTHO05D005565 6.3e-18 95.1 126 49.2
AUR62017723 Chenopodium quinoa HOM05D004771 ORTHO05D005565 8.3e-18 94.7 83 65.1
Os01g0617800 Oryza sativa ssp. japonica HOM05D004771 ORTHO05D005565 1.1e-17 94.4 140 45.7
Zm00001eb002910 Zea mays HOM05D004771 ORTHO05D005565 1.1e-17 94.4 140 45.7
Zm00001eb003040 Zea mays HOM05D004771 ORTHO05D005565 1.1e-17 94.4 140 45.7
Sed0006388 Sechium edule HOM05D004771 ORTHO05D005565 1.8e-17 93.6 73 67.1
Zm00001eb159770 Zea mays HOM05D004771 ORTHO05D005565 4.1e-17 92.4 140 45.0
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.6e-16 90.5 141 43.3
HanXRQChr11g0345411 Helianthus annuus HOM05D004771 ORTHO05D005565 2.7e-16 89.7 248 39.9
Oeu012349.1 Olea europaea HOM05D004771 ORTHO05D005565 4.5e-16 89.0 59 83.1
vmacro00584 Vaccinium macrocarpon HOM05D004771 ORTHO05D005565 9.4e-14 81.3 135 60.0
Gohir.D01G171500 Gossypium hirsutum HOM05D004771 ORTHO05D005565 1.6e-13 80.5 63 66.7
arahy.Tifrunner.gnm1.ann1.S1TJ9S Arachis hypogaea HOM05D004771 ORTHO05D005565 8.0e-13 78.2 74 58.1
Nitab4.5_0001458g0040 Nicotiana tabacum HOM05D004771 ORTHO05D005565 2.3e-12 76.6 57 73.7
arahy.Tifrunner.gnm1.ann1.P0FJQ9 Arachis hypogaea HOM05D004771 ORTHO05D005565 6.8e-12 75.1 66 63.6
Mapoly0060s0029 Marchantia polymorpha HOM05D004771 ORTHO05D005565 2.0e-11 73.6 140 42.1
Pp3c4_10090 Physcomitrium patens HOM05D004771 ORTHO05D005565 2.6e-11 73.2 123 43.1
Rhsim02G0173400 Rhododendron simsii HOM05D004771 ORTHO05D005565 3.7e-10 69.3 44 79.5
arahy.Tifrunner.gnm1.ann1.MQV2C0 Arachis hypogaea HOM05D004771 ORTHO05D005565 1.4e-09 67.4 120 52.5
CARHR045930 Cardamine hirsuta HOM05D004771 ORTHO05D005565 2.7e-08 63.2 83 48.2
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 1.3e-07 60.8 53 64.2


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