Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 0.0e+00 1444.9 890 100.0
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 6.4e-304 1047.3 901 79.7
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 8.6e-232 807.7 950 55.9
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 1.1e-231 807.4 950 55.9
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 1.4e-194 684.1 1025 51.0
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 3.2e-146 523.5 946 46.1
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 1.2e-132 478.4 964 40.4
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 7.2e-130 469.2 975 42.4
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 3.6e-121 440.3 923 40.5
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 1.4e-120 438.3 976 41.4
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 1.9e-114 417.9 983 38.8
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 1.2e-111 408.7 980 38.4
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 9.2e-109 399.1 952 37.5
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 2.7e-108 397.5 931 41.5
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 1.3e-107 395.2 956 37.3
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 3.3e-106 390.6 938 37.8
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.6e-103 380.9 959 37.0
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 4.4e-103 380.2 966 38.5
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 7.5e-103 379.4 934 36.9
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 3.2e-101 374.0 953 38.6
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 9.5e-98 362.5 937 35.4
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 1.2e-97 362.1 947 41.1
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 4.7e-97 360.1 933 35.7
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 1.4e-96 358.6 966 40.2
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 7.6e-95 352.8 896 37.7
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 7.6e-95 352.8 919 37.8
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 1.4e-93 348.6 909 37.5
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 1.9e-93 348.2 941 40.1
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 4.2e-93 347.1 966 36.4
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 1.9e-90 338.2 1013 35.9
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 8.1e-89 332.8 958 40.7
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 1.1e-88 332.4 928 35.9
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 2.4e-88 331.3 909 39.6
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 3.1e-88 330.9 913 36.1
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.0e-87 328.2 957 36.9
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 4.4e-87 327.0 953 34.1
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 2.9e-86 324.3 941 38.2
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 8.4e-86 322.8 965 36.0
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 1.9e-85 321.6 921 38.0
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 7.1e-85 319.7 960 36.0
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.1e-84 318.2 936 37.7
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 7.8e-84 316.2 926 36.4
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 1.1e-82 312.4 959 33.5
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.5e-82 312.0 940 36.3
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 1.5e-82 312.0 926 33.4
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 4.3e-82 310.5 849 39.6
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 4.8e-81 307.0 958 34.4
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 4.8e-81 307.0 925 37.9
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 7.6e-79 299.7 927 33.4
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 9.9e-79 299.3 967 34.4
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 1.9e-77 295.0 930 33.3
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 1.6e-76 292.0 931 35.7
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 3.5e-76 290.8 928 35.2
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 6.7e-75 286.6 971 34.6
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 6.7e-75 286.6 926 36.0
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 1.9e-74 285.0 1069 33.1
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 7.4e-74 283.1 959 34.0
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 3.1e-72 277.7 980 34.0
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 1.2e-71 275.8 989 35.3
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 1.7e-70 271.9 938 34.8
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 8.4e-70 269.6 987 38.5
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 1.4e-69 268.9 927 34.0
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 7.9e-68 263.1 1004 33.2
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 1.6e-65 255.4 946 36.4
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 4.0e-64 250.8 904 32.7
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 2.6e-63 248.1 972 32.7
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.6e-63 248.1 961 35.3
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 5.8e-63 246.9 902 30.9
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 5.8e-63 246.9 957 34.8
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 7.6e-63 246.5 902 35.4
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 1.6e-60 238.8 970 34.6
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.3e-59 235.7 916 34.0
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 4.3e-58 230.7 995 34.3
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 4.3e-58 230.7 1002 29.4
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 3.7e-57 227.6 969 33.6
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 4.8e-57 227.3 940 34.6
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 8.2e-57 226.5 899 30.6
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 3.1e-56 224.6 957 35.6
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 6.9e-56 223.4 504 37.7
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 4.5e-55 220.7 919 29.8
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 1.0e-54 219.5 960 31.8
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 9.4e-53 213.0 356 47.8
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 2.0e-50 205.3 973 29.8
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 2.8e-49 201.4 966 30.5
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 1.8e-48 198.7 952 30.6
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 1.5e-47 195.7 949 29.2
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 3.2e-45 188.0 916 29.0
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 3.2e-45 188.0 966 28.6
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 4.2e-45 187.6 916 29.0
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 8.8e-43 179.9 566 33.2
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 1.1e-42 179.5 910 29.7
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 2.6e-42 178.3 902 28.6
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 7.4e-42 176.8 905 29.7
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 2.8e-41 174.9 897 29.1
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 3.1e-40 171.4 955 29.7
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 9.1e-40 169.9 496 34.9
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 2.6e-39 168.3 919 27.7
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 2.9e-38 164.9 279 45.2
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 1.4e-37 162.5 910 27.1
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 5.5e-37 160.6 912 27.3
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 9.4e-37 159.8 522 32.2
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 1.6e-36 159.1 892 26.5
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 4.7e-36 157.5 910 26.3
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 6.1e-36 157.1 922 27.5
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 6.1e-36 157.1 953 32.8
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 8.0e-36 156.8 160 60.6
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 3.0e-35 154.8 897 30.2
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 3.9e-35 154.5 918 27.2
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 1.1e-34 152.9 924 28.4
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 2.0e-34 152.1 909 28.8
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 4.4e-34 151.0 958 27.5
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 5.7e-34 150.6 317 39.1
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 7.4e-34 150.2 891 27.8
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 9.7e-34 149.8 209 51.7
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 4.1e-32 144.4 892 25.6
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 3.6e-28 131.3 921 27.9
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 8.0e-28 130.2 242 41.7
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 8.0e-28 130.2 922 31.3
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 2.4e-24 118.6 930 28.7
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 4.1e-24 117.9 967 25.6
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 9.1e-24 116.7 983 25.3
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 7.7e-23 113.6 968 26.7
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 7.2e-21 107.1 239 37.7
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 1.0e-19 103.2 283 35.0
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 6.8e-19 100.5 859 25.6
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 1.2e-18 99.8 270 35.6
Psat5g077040 Pisum sativum HOM05D004628 ORTHO05D005166 4.4e-18 97.8 156 44.2
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 9.8e-18 96.7 908 24.6
BcaC05g25526 Brassica carinata HOM05D004628 ORTHO05D005166 4.1e-16 91.3 980 25.4
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 3.8e-14 84.7 811 26.0
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 6.6e-14 84.0 80 56.2
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 1.1e-13 83.2 305 29.8
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 7.2e-13 80.5 71 69.0
Psat0ss6263g0240 Pisum sativum HOM05D004165 ORTHO05D005166 9.5e-13 80.1 68 61.8
CAN.G535.2 Capsicum annuum HOM05D004628 ORTHO05D005166 8.0e-12 77.0 105 44.8
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 4.0e-11 74.7 254 35.8
CAN.G289.57 Capsicum annuum HOM05D004628 ORTHO05D005166 5.2e-11 74.3 197 35.0
FvH4_6g23772 Fragaria vesca HOM05D004628 ORTHO05D005166 6.8e-11 73.9 209 35.9
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 2.0e-10 72.4 110 50.0
Nn5g30859 Nelumbo nucifera HOM05D004628 ORTHO05D005166 3.4e-10 71.6 127 43.3
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 7.0e-08 63.9 115 43.5
Nitab4.5_0000575g0060 Nicotiana tabacum HOM05D004628 ORTHO05D005166 7.0e-08 63.9 243 33.7
Nn1g01808 Nelumbo nucifera HOM05D004628 ORTHO05D005166 9.2e-08 63.5 81 48.1
Psat7g034040 Pisum sativum HOM05D000070 ORTHO05D007395 2.7e-07 62.0 130 40.0
Psat0ss6263g0080 Pisum sativum HOM05D004165 ORTHO05D005166 4.5e-07 61.2 118 37.3
CAN.G289.55 Capsicum annuum HOM05D004628 ORTHO05D005166 1.7e-06 59.3 337 30.6
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 1.7e-06 59.3 888 24.8
VMungo1215G3006 Vigna mungo HOM05D004628 ORTHO05D005166 2.3e-06 58.9 76 50.0
ATR0767G029 Amborella trichopoda HOM05D004628 ORTHO05D005166 3.9e-06 58.2 807 24.5
CAN.G1627.4 Capsicum annuum HOM05D004628 ORTHO05D005166 3.9e-06 58.2 43 67.4
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 8.6e-06 57.0 191 30.9


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