Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 4.2e-89 331.3 158 100.0
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 6.1e-72 274.2 159 82.4
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 7.4e-70 267.3 154 82.5
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 3.1e-68 261.9 157 80.3
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 4.5e-67 258.1 157 79.0
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 7.7e-67 257.3 157 79.0
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 3.8e-66 255.0 157 78.3
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 3.8e-66 255.0 154 81.2
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.9e-65 252.7 157 77.7
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 2.5e-65 252.3 157 77.7
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 2.5e-65 252.3 139 84.9
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 2.7e-64 248.8 157 76.4
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 3.0e-63 245.4 156 76.9
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.5e-62 243.0 151 78.8
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 2.8e-61 238.8 158 73.4
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.1e-60 236.9 158 72.8
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 1.4e-60 236.5 145 77.2
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 1.8e-60 236.1 157 74.5
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 3.1e-60 235.3 143 76.9
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 4.1e-60 235.0 148 74.3
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 4.1e-60 235.0 137 75.9
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 7.0e-60 234.2 146 76.7
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 9.1e-60 233.8 146 76.7
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 9.1e-60 233.8 138 75.4
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 9.1e-60 233.8 143 72.7
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 1.2e-59 233.4 156 75.0
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 2.0e-59 232.6 146 76.0
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 2.0e-59 232.6 152 73.7
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 5.9e-59 231.1 148 73.6
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 5.9e-59 231.1 165 69.7
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 7.7e-59 230.7 153 70.6
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 7.7e-59 230.7 155 72.9
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 1.3e-58 229.9 132 81.8
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 1.3e-58 229.9 140 75.0
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 1.7e-58 229.6 142 73.9
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 2.9e-58 228.8 148 74.3
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 2.9e-58 228.8 142 74.6
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 2.9e-58 228.8 150 71.3
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 3.8e-58 228.4 165 72.1
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 3.8e-58 228.4 144 73.6
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 5.0e-58 228.0 138 76.1
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 1.1e-57 226.9 146 74.0
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 1.5e-57 226.5 146 74.0
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.9e-57 226.1 158 71.5
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 1.9e-57 226.1 152 73.0
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 1.9e-57 226.1 148 70.9
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 2.5e-57 225.7 149 71.1
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 7.2e-57 224.2 150 72.0
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 1.6e-56 223.0 157 67.5
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 2.1e-56 222.6 149 69.8
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 2.7e-56 222.2 150 68.7
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 2.7e-56 222.2 150 68.7
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 2.7e-56 222.2 150 68.7
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 3.6e-56 221.9 149 70.5
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 8.0e-56 220.7 158 68.4
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 1.0e-55 220.3 135 73.3
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 1.8e-55 219.5 154 68.8
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 2.3e-55 219.2 159 69.2
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 3.0e-55 218.8 150 67.3
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 3.0e-55 218.8 150 67.3
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 3.0e-55 218.8 150 67.3
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 3.0e-55 218.8 143 67.8
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 4.0e-55 218.4 149 69.8
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 5.2e-55 218.0 153 68.6
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 5.2e-55 218.0 149 72.5
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 6.7e-55 217.6 151 68.2
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 6.7e-55 217.6 143 74.8
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 1.1e-54 216.9 150 68.0
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.5e-54 216.5 140 70.7
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 1.5e-54 216.5 143 72.7
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 1.5e-54 216.5 144 73.6
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 2.0e-54 216.1 143 70.6
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 3.3e-54 215.3 138 71.0
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 7.5e-54 214.2 141 75.2
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 7.5e-54 214.2 148 70.3
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 7.5e-54 214.2 156 66.0
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 9.7e-54 213.8 138 71.0
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 1.4e-52 209.9 148 68.2
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 3.1e-52 208.8 137 73.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 1.2e-51 206.8 137 69.3
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 4.5e-51 204.9 137 72.3
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 1.3e-50 203.4 137 69.3
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 1.7e-50 203.0 142 71.1
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 8.5e-50 200.7 136 68.4
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 9.4e-49 197.2 157 65.6
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 5.7e-46 188.0 145 60.7
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 7.5e-46 187.6 147 60.5
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 9.8e-46 187.2 147 60.5
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 7.7e-43 177.6 134 58.2
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.0e-42 177.2 138 60.9
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.5e-41 173.3 160 58.1
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 2.5e-41 172.6 151 60.9
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 3.7e-37 158.7 146 55.5
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 8.3e-37 157.5 135 52.6
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 3.1e-36 155.6 101 69.3
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 5.4e-36 154.8 104 77.9
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 7.0e-36 154.5 98 78.6
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 3.8e-34 148.7 134 53.7
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 1.5e-33 146.7 140 54.3
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 7.3e-33 144.4 144 53.5
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 4.7e-32 141.7 137 52.6
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 8.0e-32 141.0 105 66.7
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 1.0e-31 140.6 149 49.0
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 3.0e-31 139.0 95 67.4
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 6.4e-29 131.3 142 50.0
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.1e-25 120.6 134 48.5
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 1.6e-19 100.1 85 60.0
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 2.0e-19 99.8 74 68.9
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 2.7e-19 99.4 118 44.1
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 3.9e-18 95.5 103 50.5
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 5.6e-17 91.7 158 38.0
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 7.5e-14 81.3 155 34.2


User provided reference genes

Program Settings