Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004644 Carpinus fangiana HOM05D005641 ORTHO05D002074 3.0e-196 688.3 346 100.0
Haze_05843 Corylus avellana HOM05D009249 ORTHO05D002074 3.8e-26 123.2 121 50.4
Cfa000815 Carpinus fangiana HOM05D009249 ORTHO05D002074 4.9e-26 122.9 225 36.0
Haze_05841 Corylus avellana HOM05D001081 ORTHO05D003320 3.2e-25 120.2 121 47.9
Cfa005690 Carpinus fangiana HOM05D011595 ORTHO05D002074 9.4e-17 92.0 139 35.3
Cfa005826 Carpinus fangiana HOM05D011595 ORTHO05D002074 1.5e-14 84.7 120 36.7
Cfa009911 Carpinus fangiana HOM05D011595 ORTHO05D002074 2.0e-14 84.3 120 34.2
Cfa013274 Carpinus fangiana HOM05D011595 ORTHO05D002074 7.4e-14 82.4 116 34.5
Cfa014362 Carpinus fangiana HOM05D011595 ORTHO05D002074 7.4e-14 82.4 116 34.5
Cfa023057 Carpinus fangiana HOM05D011595 ORTHO05D002074 7.4e-14 82.4 116 34.5
CiPaw.01G191600 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.0e-10 72.0 108 36.1
CiPaw.03G185500 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.0e-10 72.0 108 36.1
CiPaw.05G062600 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.0e-10 72.0 108 36.1
CiPaw.08G147800 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.0e-10 72.0 108 36.1
CiPaw.16G048300 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.0e-10 72.0 108 36.1
CiPaw.15G142900 Carya illinoinensis HOM05D009249 ORTHO05D002074 2.2e-10 70.9 108 36.1
Cfa019184 Carpinus fangiana HOM05D016486 ORTHO05D002074 3.8e-10 70.1 83 47.0
FAN20G2714 Fragaria x ananassa HOM05D005641 ORTHO05D007953 5.0e-10 69.7 39 76.9
FAN24G2036 Fragaria x ananassa HOM05D005641 ORTHO05D007953 5.0e-10 69.7 54 61.1
CiPaw.05G226000 Carya illinoinensis HOM05D009249 ORTHO05D002074 6.5e-10 69.3 108 35.2
CiPaw.07G065900 Carya illinoinensis HOM05D009249 ORTHO05D002074 6.5e-10 69.3 114 35.1
MD05G1097100 Malus domestica HOM05D005641 ORTHO05D007953 6.5e-10 69.3 39 76.9
CiPaw.04G073500 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.1e-09 68.6 108 35.2
CiPaw.15G025600 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.1e-09 68.6 108 35.2
CiPaw.16G050500 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.1e-09 68.6 108 35.2
FvH4_2g04060 Fragaria vesca HOM05D005641 ORTHO05D007953 1.1e-09 68.6 39 74.4
FAN15G3008 Fragaria x ananassa HOM05D005641 ORTHO05D007953 1.1e-09 68.6 39 74.4
RcHm_v2.0_Chr6g0253411 Rosa chinensis HOM05D005641 ORTHO05D007953 1.1e-09 68.6 39 74.4
CiPaw.01G069800 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.4e-09 68.2 108 35.2
CiPaw.05G234200 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.4e-09 68.2 108 35.2
CiPaw.07G132700 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.4e-09 68.2 108 33.3
CiPaw.09G056200 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.4e-09 68.2 108 35.2
CiPaw.15G138800 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.4e-09 68.2 108 35.2
CiPaw.09G194800 Carya illinoinensis HOM05D009249 ORTHO05D002074 3.2e-09 67.0 108 34.3
QL02p095028 Quercus lobata HOM05D002938 ORTHO05D002074 5.5e-09 66.2 128 35.9
SEGI_20221 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 5.5e-09 66.2 41 65.9
SEGI_25796 Sequoiadendron giganteum HOM05D005641 ORTHO05D007953 5.5e-09 66.2 41 65.9
HanXRQChr03g0069981 Helianthus annuus HOM05D005641 ORTHO05D007953 7.2e-09 65.9 39 71.8
arahy.Tifrunner.gnm1.ann1.C5GEYC Arachis hypogaea HOM05D005641 ORTHO05D007953 9.4e-09 65.5 39 71.8
arahy.Tifrunner.gnm1.ann1.GRNJ5W Arachis hypogaea HOM05D005641 ORTHO05D007953 9.4e-09 65.5 39 71.8
Eucgr.G01266 Eucalyptus grandis HOM05D005641 ORTHO05D007953 9.4e-09 65.5 39 69.2
CiPaw.08G177000 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.2e-08 65.1 107 34.6
Eucgr.G01263 Eucalyptus grandis HOM05D005641 ORTHO05D007953 1.2e-08 65.1 39 66.7
CiPaw.10G135700 Carya illinoinensis HOM05D009249 ORTHO05D002074 1.6e-08 64.7 108 33.3
Prupe.8G141700 Prunus persica HOM05D005641 ORTHO05D007953 1.6e-08 64.7 39 71.8
QL02p069388 Quercus lobata HOM05D005641 ORTHO05D007953 1.6e-08 64.7 39 71.8
CANSAT25G1977 Cannabis sativa HOM05D005641 ORTHO05D007953 2.1e-08 64.3 38 73.7
Cfa004645 Carpinus fangiana HOM05D005641 ORTHO05D007953 2.1e-08 64.3 39 71.8
Haze_10242 Corylus avellana HOM05D005641 ORTHO05D007953 2.1e-08 64.3 39 71.8
DCAR_029115 Daucus carota HOM05D005641 ORTHO05D007953 2.1e-08 64.3 39 71.8
QL03p016687 Quercus lobata HOM05D002938 ORTHO05D002074 2.1e-08 64.3 117 37.6
SMO119G0506 Selaginella moellendorffii HOM05D005641 ORTHO05D007953 2.1e-08 64.3 46 54.3
unitig_744.g24456 Utricularia gibba HOM05D005641 ORTHO05D007953 2.1e-08 64.3 41 68.3
Ciclev10029502m.g Citrus clementina HOM05D005641 ORTHO05D007953 2.7e-08 63.9 39 69.2
FAN27G3103 Fragaria x ananassa HOM05D005641 ORTHO05D007953 2.7e-08 63.9 37 73.0
Hma1.2p1_1023F.1_g248880 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 2.7e-08 63.9 39 69.2
Hma1.2p1_1023F.1_g248890 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 2.7e-08 63.9 39 69.2
Oeu043432.1 Olea europaea HOM05D002938 ORTHO05D002074 2.7e-08 63.9 114 34.2
QL02p069415 Quercus lobata HOM05D000030 ORTHO05D000009 2.7e-08 63.9 45 64.4
CiPaw.08G168700 Carya illinoinensis HOM05D009249 ORTHO05D002074 3.6e-08 63.5 108 34.3
CiPaw.11G017700 Carya illinoinensis HOM05D009249 ORTHO05D002074 3.6e-08 63.5 108 34.3
Manes.10G080400 Manihot esculenta HOM05D005641 ORTHO05D007953 3.6e-08 63.5 39 69.2
Oeu013791.1 Olea europaea HOM05D002938 ORTHO05D002074 3.6e-08 63.5 114 35.1
Oeu023641.1 Olea europaea HOM05D002938 ORTHO05D002074 3.6e-08 63.5 118 35.6
Cc02_g19690 Coffea canephora HOM05D005641 ORTHO05D007953 4.7e-08 63.2 39 71.8
Cpa.g.sc106.73 Carica papaya HOM05D005641 ORTHO05D007953 6.1e-08 62.8 39 69.2
Oeu021705.1 Olea europaea HOM05D002938 ORTHO05D002074 6.1e-08 62.8 111 36.0
Phvul.002G052300 Phaseolus vulgaris HOM05D005641 ORTHO05D007953 6.1e-08 62.8 39 66.7
Actinidia27984 Actinidia chinensis HOM05D005641 ORTHO05D007953 7.9e-08 62.4 39 69.2
MELO3C017992.2 Cucumis melo HOM05D005641 ORTHO05D007953 7.9e-08 62.4 39 69.2
CsaV3_4G000430 Cucumis sativus L. HOM05D005641 ORTHO05D007953 7.9e-08 62.4 39 69.2
Oeu024331.1 Olea europaea HOM05D002938 ORTHO05D002074 7.9e-08 62.4 114 34.2
Rhsim05G0090100 Rhododendron simsii HOM05D005641 ORTHO05D007953 7.9e-08 62.4 39 69.2
Sabra09G0069700 Salix brachista HOM05D005641 ORTHO05D007953 7.9e-08 62.4 50 54.0
vmacro19527 Vaccinium macrocarpon HOM05D005641 ORTHO05D007953 7.9e-08 62.4 39 69.2
Aqoxy6G02714 Aquilegia oxysepala HOM05D005641 ORTHO05D007953 1.0e-07 62.0 39 66.7
ECA240G0483 Erigeron canadensis HOM05D005641 ORTHO05D007953 1.0e-07 62.0 39 66.7
TWI14G0306 Tripterygium wilfordii HOM05D005641 ORTHO05D007953 1.0e-07 62.0 50 52.0
MSTRG.5328 Avicennia marina HOM05D005641 ORTHO05D007953 1.4e-07 61.6 40 67.5
Gohir.D02G205400 Gossypium hirsutum HOM05D005641 ORTHO05D007953 1.4e-07 61.6 59 49.2
Gorai.005G232800 Gossypium raimondii HOM05D005641 ORTHO05D007953 1.4e-07 61.6 59 49.2
Lj1g0011960 Lotus japonicus HOM05D005641 ORTHO05D007953 1.4e-07 61.6 39 66.7
Sc14g0002550 Simmondsia chinensis HOM05D005641 ORTHO05D007953 1.4e-07 61.6 39 69.2
GSVIVG01037858001 Vitis vinifera HOM05D005641 ORTHO05D007953 1.4e-07 61.6 51 54.9
CSS0033790 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 1.8e-07 61.2 39 66.7
Lj9A326T80 Lonicera japonica HOM05D005641 ORTHO05D007953 1.8e-07 61.2 39 69.2
Oeu037265.1 Olea europaea HOM05D005641 ORTHO05D007953 1.8e-07 61.2 39 66.7
PSO675G2895 Papaver somniferum HOM05D005641 ORTHO05D007953 1.8e-07 61.2 39 69.2
SGA_v2.0_scaffold337G49200 Striga asiatica HOM05D005641 ORTHO05D007953 1.8e-07 61.2 53 58.5
Zm00001eb137960 Zea mays HOM05D005641 ORTHO05D007953 1.8e-07 61.2 39 66.7
ClCG10G010510 Citrullus lanatus HOM05D005641 ORTHO05D007953 2.3e-07 60.8 34 76.5
COL.COLO4_32537 Corchorus olitorius HOM05D005641 ORTHO05D007953 2.3e-07 60.8 50 52.0
Dinv42223 Davidia involucrata HOM05D005641 ORTHO05D007953 2.3e-07 60.8 38 71.1
Oeu032394.1 Olea europaea HOM05D002938 ORTHO05D002074 2.3e-07 60.8 114 36.0
QL02p095039 Quercus lobata HOM05D009249 ORTHO05D002074 2.3e-07 60.8 99 37.4
QL03p016706 Quercus lobata HOM05D009249 ORTHO05D002074 2.3e-07 60.8 99 37.4
Glyma.01G243000 Glycine max HOM05D005641 ORTHO05D007953 3.0e-07 60.5 39 64.1
Gohir.A03G183900 Gossypium hirsutum HOM05D005641 ORTHO05D007953 3.0e-07 60.5 59 49.2
Oeu017255.1 Olea europaea HOM05D002938 ORTHO05D002074 3.0e-07 60.5 110 35.5
Oeu029709.1 Olea europaea HOM05D002938 ORTHO05D002074 3.0e-07 60.5 113 31.9
Oeu045718.1 Olea europaea HOM05D002938 ORTHO05D002074 3.0e-07 60.5 114 33.3
TAR376G1148 Trochodendron aralioides HOM05D005641 ORTHO05D007953 3.0e-07 60.5 39 66.7
Ah.09g231980 Amaranthus hybridus HOM05D005641 ORTHO05D007953 3.9e-07 60.1 39 66.7
Thecc.02G114700 Theobroma cacao HOM05D005641 ORTHO05D007953 3.9e-07 60.1 39 64.1
Atru.chr5.2402 Acer truncatum HOM05D005641 ORTHO05D007953 5.1e-07 59.7 39 66.7
Ciclev10028542m.g Citrus clementina HOM05D005641 ORTHO05D007953 5.1e-07 59.7 39 64.1
Oeu059948.1 Olea europaea HOM05D002938 ORTHO05D002074 5.1e-07 59.7 114 35.1
SalBow3G4250 Salvia bowleyana HOM05D005641 ORTHO05D007953 5.1e-07 59.7 40 65.0
VMungo1215G0158 Vigna mungo HOM05D005641 ORTHO05D007953 5.1e-07 59.7 34 70.6
Migut.O00678 Erythranthe guttata HOM05D005641 ORTHO05D007953 6.7e-07 59.3 39 66.7
Oeu011840.1 Olea europaea HOM05D002938 ORTHO05D002074 6.7e-07 59.3 114 34.2
Oeu012427.1 Olea europaea HOM05D002938 ORTHO05D002074 6.7e-07 59.3 114 35.1
Oeu025530.1 Olea europaea HOM05D002938 ORTHO05D002074 6.7e-07 59.3 125 33.6
Oeu039201.1 Olea europaea HOM05D002938 ORTHO05D002074 6.7e-07 59.3 138 31.2
Oeu056546.1 Olea europaea HOM05D002938 ORTHO05D002074 6.7e-07 59.3 114 36.0
Oeu060053.1 Olea europaea HOM05D002938 ORTHO05D002074 6.7e-07 59.3 111 35.1
PSO541G1794 Papaver somniferum HOM05D005641 ORTHO05D007953 6.7e-07 59.3 39 66.7
PGR042G1829 Punica granatum HOM05D005641 ORTHO05D007953 6.7e-07 59.3 38 65.8
Sed0000346 Sechium edule HOM05D005641 ORTHO05D007953 6.7e-07 59.3 39 66.7
BcaC04g23064 Brassica carinata HOM05D005641 ORTHO05D007953 8.8e-07 58.9 39 64.1
BolC9t54144H Brassica oleracea HOM05D005641 ORTHO05D007953 8.8e-07 58.9 39 64.1
CSS0039741 Camellia sinensis var. sinensis HOM05D005641 ORTHO05D007953 8.8e-07 58.9 39 64.1
COL.COLO4_14902 Corchorus olitorius HOM05D014372 ORTHO05D011992 8.8e-07 58.9 139 28.1
Migut.N01150 Erythranthe guttata HOM05D005641 ORTHO05D007953 8.8e-07 58.9 39 64.1
Thhalv10022899m.g Eutrema salsugineum HOM05D005641 ORTHO05D007953 8.8e-07 58.9 39 64.1
Oeu048796.4 Olea europaea HOM05D002938 ORTHO05D002074 8.8e-07 58.9 114 34.2
Oeu061882.1 Olea europaea HOM05D002938 ORTHO05D002074 8.8e-07 58.9 112 33.9
HPP92_020459 Vanilla planifolia HOM05D005641 ORTHO05D007953 8.8e-07 58.9 38 65.8
AL3G46570 Arabidopsis lyrata HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 61.5
AT2G14825 Arabidopsis thaliana HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 61.5
EL10Ac8g19366 Beta vulgaris HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 64.1
A09p10560 Brassica napus HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 64.1
C09p12490 Brassica napus HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 64.1
BraA09t36698Z Brassica rapa HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 64.1
Carub.0003s2882 Capsella rubella HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 61.5
Medtr5g005150 Medicago truncatula HOM05D005641 ORTHO05D007953 1.1e-06 58.5 38 65.8
Oeu014141.1 Olea europaea HOM05D002938 ORTHO05D002074 1.1e-06 58.5 114 34.2
Oeu024095.1 Olea europaea HOM05D002938 ORTHO05D002074 1.1e-06 58.5 114 33.3
Os12g0508266 Oryza sativa ssp. japonica HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 59.0
Sp3g28020 Schrenkiella parvula HOM05D005641 ORTHO05D007953 1.1e-06 58.5 39 61.5
CARHR284800 Cardamine hirsuta HOM05D005641 ORTHO05D007953 1.5e-06 58.2 39 61.5
AUR62022504 Chenopodium quinoa HOM05D005641 ORTHO05D007953 1.5e-06 58.2 39 61.5
Oeu008946.1 Olea europaea HOM05D002938 ORTHO05D002074 1.5e-06 58.2 107 35.5
Oeu029439.1 Olea europaea HOM05D002938 ORTHO05D002074 1.5e-06 58.2 114 33.3
Oeu063820.1 Olea europaea HOM05D002938 ORTHO05D002074 1.5e-06 58.2 114 33.3
Psat4g227920 Pisum sativum HOM05D005641 ORTHO05D007953 1.5e-06 58.2 39 61.5
CiPaw.06G166900 Carya illinoinensis HOM05D005641 ORTHO05D007953 2.0e-06 57.8 39 61.5
AUR62031337 Chenopodium quinoa HOM05D005641 ORTHO05D007953 2.0e-06 57.8 39 61.5
Oeu012881.1 Olea europaea HOM05D002938 ORTHO05D002074 2.0e-06 57.8 114 34.2
Oeu031088.1 Olea europaea HOM05D002938 ORTHO05D002074 2.0e-06 57.8 113 32.7
Oeu036490.1 Olea europaea HOM05D002938 ORTHO05D002074 2.0e-06 57.8 114 33.3
Potri.009G090100 Populus trichocarpa HOM05D005641 ORTHO05D007953 2.0e-06 57.8 39 59.0
HPP92_026175 Vanilla planifolia HOM05D005641 ORTHO05D007953 2.0e-06 57.8 38 65.8
CDE06G0500 Ceratophyllum demersum HOM05D005641 ORTHO05D007953 2.6e-06 57.4 39 61.5
Nn1g04606 Nelumbo nucifera HOM05D005641 ORTHO05D007953 2.6e-06 57.4 61 44.3
Oeu001016.1 Olea europaea HOM05D002938 ORTHO05D002074 2.6e-06 57.4 111 33.3
Oeu004077.1 Olea europaea HOM05D002938 ORTHO05D002074 2.6e-06 57.4 106 34.9
Oeu014899.1 Olea europaea HOM05D002938 ORTHO05D002074 2.6e-06 57.4 114 32.5
Oeu028267.1 Olea europaea HOM05D002938 ORTHO05D002074 2.6e-06 57.4 112 34.8
Oeu029207.1 Olea europaea HOM05D002938 ORTHO05D002074 2.6e-06 57.4 119 37.0
Oeu060966.1 Olea europaea HOM05D002938 ORTHO05D002074 2.6e-06 57.4 119 33.6
Cfa012731 Carpinus fangiana HOM05D009249 ORTHO05D002074 3.3e-06 57.0 83 38.6
Ca_24352_v3 Cicer arietinum L. HOM05D005641 ORTHO05D007953 3.3e-06 57.0 39 64.1
Oeu004095.1 Olea europaea HOM05D002938 ORTHO05D002074 3.3e-06 57.0 114 32.5
Oeu054592.1 Olea europaea HOM05D002938 ORTHO05D002074 3.3e-06 57.0 114 34.2
Oeu063390.1 Olea europaea HOM05D002938 ORTHO05D002074 3.3e-06 57.0 106 34.9
Pp3c6_20250 Physcomitrium patens HOM05D005641 ORTHO05D007953 3.3e-06 57.0 35 60.0
TPR.G8292 Trifolium pratense HOM05D005641 ORTHO05D007953 3.3e-06 57.0 38 65.8
Oeu002229.1 Olea europaea HOM05D002938 ORTHO05D002074 4.4e-06 56.6 107 34.6
Oeu016454.1 Olea europaea HOM05D002938 ORTHO05D002074 4.4e-06 56.6 114 34.2
Oeu054392.1 Olea europaea HOM05D002938 ORTHO05D002074 4.4e-06 56.6 114 33.3
Oeu055574.1 Olea europaea HOM05D002938 ORTHO05D002074 4.4e-06 56.6 138 29.7
Oeu056559.1 Olea europaea HOM05D002938 ORTHO05D002074 4.4e-06 56.6 114 32.5
Aa31LG8G12890 Aethionema arabicum HOM05D005641 ORTHO05D007953 5.7e-06 56.2 39 56.4
COL.COLO4_21305 Corchorus olitorius HOM05D014372 ORTHO05D011992 5.7e-06 56.2 122 28.7
Lsat_1_v5_gn_9_112460 Lactuca sativa HOM05D005641 ORTHO05D007953 5.7e-06 56.2 39 64.1
Oeu016458.1 Olea europaea HOM05D002938 ORTHO05D002074 5.7e-06 56.2 110 32.7
Oeu042992.1 Olea europaea HOM05D002938 ORTHO05D002074 5.7e-06 56.2 139 30.9
Dinv14202 Davidia involucrata HOM05D010363 ORTHO05D008693 7.4e-06 55.8 113 31.9
Oeu004199.1 Olea europaea HOM05D002938 ORTHO05D002074 7.4e-06 55.8 114 35.1
Oeu004840.1 Olea europaea HOM05D002938 ORTHO05D002074 7.4e-06 55.8 112 33.9
Oeu060379.2 Olea europaea HOM05D002938 ORTHO05D002074 7.4e-06 55.8 138 29.7
THA.LOC104819534 Tarenaya hassleriana HOM05D005641 ORTHO05D007953 7.4e-06 55.8 39 59.0
Hma1.2p1_1023F.1_g248900 Hydrangea macrophylla HOM05D005641 ORTHO05D007953 9.7e-06 55.5 37 64.9
Oeu023279.1 Olea europaea HOM05D002938 ORTHO05D002074 9.7e-06 55.5 184 26.1
Oeu028860.1 Olea europaea HOM05D002938 ORTHO05D002074 9.7e-06 55.5 113 31.0
Oeu036386.1 Olea europaea HOM05D001351 ORTHO05D001203 9.7e-06 55.5 97 33.0
PGR042G3728 Punica granatum HOM05D005641 ORTHO05D007953 9.7e-06 55.5 55 45.5


User provided reference genes

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