Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004486 Carpinus fangiana HOM05D000412 ORTHO05D043747 4.0e-134 481.5 253 100.0
Haze_10043 Corylus avellana HOM05D000412 ORTHO05D000429 2.4e-62 243.0 363 46.6
QL02p100445 Quercus lobata HOM05D000412 ORTHO05D000429 9.2e-46 188.0 589 30.2
CiPaw.05G004700 Carya illinoinensis HOM05D000412 ORTHO05D000429 1.2e-40 171.0 583 29.5
CiPaw.06G173700 Carya illinoinensis HOM05D000412 ORTHO05D000429 2.3e-36 156.8 558 30.8
RcHm_v2.0_Chr7g0224861 Rosa chinensis HOM05D000412 ORTHO05D000429 3.9e-28 129.4 562 26.0
FAN18G2866 Fragaria x ananassa HOM05D000412 ORTHO05D000429 8.6e-28 128.3 560 26.2
FAN04G0677 Fragaria x ananassa HOM05D000412 ORTHO05D000429 2.3e-25 120.2 563 25.8
FAN08G3215 Fragaria x ananassa HOM05D000412 ORTHO05D000429 8.9e-25 118.2 567 25.7
FAN13G2933 Fragaria x ananassa HOM05D000412 ORTHO05D000429 4.4e-24 115.9 560 25.9
FvH4_5g30420 Fragaria vesca HOM05D000412 ORTHO05D000429 7.5e-24 115.2 284 31.7
MD08G1241700 Malus domestica HOM05D000412 ORTHO05D000429 9.9e-24 114.8 560 25.4
Dinv19415 Davidia involucrata HOM05D000412 ORTHO05D000429 4.1e-22 109.4 331 32.0
Potri.003G008400 Populus trichocarpa HOM05D000412 ORTHO05D000429 5.4e-22 109.0 337 30.9
Dinv07483 Davidia involucrata HOM05D000412 ORTHO05D000429 9.2e-22 108.2 280 33.6
GSVIVG01023248001 Vitis vinifera HOM05D000412 ORTHO05D000429 1.0e-20 104.8 607 23.7
Prupe.1G579100 Prunus persica HOM05D000412 ORTHO05D000429 2.3e-20 103.6 540 24.8
Potri.004G223800 Populus trichocarpa HOM05D000412 ORTHO05D000429 3.0e-20 103.2 118 55.9
MD15G1435500 Malus domestica HOM05D000412 ORTHO05D000429 3.9e-20 102.8 559 25.2
Actinidia01606 Actinidia chinensis HOM05D000412 ORTHO05D000429 5.6e-19 99.0 381 29.4
Actinidia26170 Actinidia chinensis HOM05D000412 ORTHO05D000429 5.6e-19 99.0 340 30.0
Sabra01G0169500 Salix brachista HOM05D000412 ORTHO05D000429 1.6e-18 97.4 118 54.2
Ciclev10000713m.g Citrus clementina HOM05D000412 ORTHO05D000429 3.1e-17 93.2 121 51.2
Atru.chr6.498 Acer truncatum HOM05D000412 ORTHO05D000429 6.8e-17 92.0 583 23.3
Hma1.2p1_0884F.1_g232480 Hydrangea macrophylla HOM05D000412 ORTHO05D000429 6.8e-17 92.0 519 23.3
CANSAT54G1620 Cannabis sativa HOM05D000412 ORTHO05D000429 1.5e-16 90.9 83 60.2
PSO170G0391 Papaver somniferum HOM05D000412 ORTHO05D000429 4.4e-16 89.4 433 25.4
Migut.B00769 Erythranthe guttata HOM05D000412 ORTHO05D000429 7.6e-16 88.6 159 42.1
Thecc.02G018400 Theobroma cacao HOM05D000412 ORTHO05D000429 9.9e-16 88.2 122 48.4
vmacro19865 Vaccinium macrocarpon HOM05D000412 ORTHO05D000429 9.9e-16 88.2 130 48.5
PSO017G4478 Papaver somniferum HOM05D000412 ORTHO05D000429 2.2e-15 87.0 433 25.6
MSTRG.20322 Avicennia marina HOM05D000412 ORTHO05D000429 3.8e-15 86.3 98 50.0
Nitab4.5_0009637g0020 Nicotiana tabacum HOM05D000412 ORTHO05D000429 4.9e-15 85.9 100 52.0
Manes.07G024100 Manihot esculenta HOM05D000412 ORTHO05D000429 6.4e-15 85.5 118 50.8
Rhsim05G0114800 Rhododendron simsii HOM05D000412 ORTHO05D000429 8.4e-15 85.1 120 49.2
COL.COLO4_17722 Corchorus olitorius HOM05D000412 ORTHO05D000429 1.4e-14 84.3 111 48.6
CSS0027998 Camellia sinensis var. sinensis HOM05D000412 ORTHO05D000429 5.4e-14 82.4 127 46.5
Gohir.D02G236800 Gossypium hirsutum HOM05D000412 ORTHO05D000429 1.2e-13 81.3 126 46.8
CAN.G855.5 Capsicum annuum HOM05D000412 ORTHO05D000429 1.6e-13 80.9 101 50.5
Nitab4.5_0000787g0170 Nicotiana tabacum HOM05D000412 ORTHO05D000429 1.6e-13 80.9 101 49.5
Solyc01g103540.3 Solanum lycopersicum HOM05D000412 ORTHO05D000429 2.7e-13 80.1 101 49.5
Duzib132G0997 Durio zibethinus HOM05D000412 ORTHO05D000429 3.5e-13 79.7 372 27.7
PGSC0003DMG400024891 Solanum tuberosum HOM05D000412 ORTHO05D000429 3.5e-13 79.7 101 50.5
Cpa.g.sc113.43 Carica papaya HOM05D000412 ORTHO05D000429 6.0e-13 79.0 282 28.7
Duzib052G0180 Durio zibethinus HOM05D000412 ORTHO05D000429 7.8e-13 78.6 354 27.4
SalBow3G2257 Salvia bowleyana HOM05D000412 ORTHO05D000429 1.7e-12 77.4 105 46.7
Sopen01g045890 Solanum pennellii HOM05D000412 ORTHO05D000429 3.0e-12 76.6 101 47.5
Rhsim05G0114700 Rhododendron simsii HOM05D000412 ORTHO05D000429 5.1e-12 75.9 96 51.0
Peaxi162Scf00011g01221 Petunia axillaris HOM05D000412 ORTHO05D000429 6.6e-12 75.5 101 47.5
Gorai.005G265300 Gossypium raimondii HOM05D000412 ORTHO05D000429 8.7e-12 75.1 385 27.5
TAR381G0966 Trochodendron aralioides HOM05D000412 ORTHO05D000429 3.3e-11 73.2 603 21.6
AUR62028252 Chenopodium quinoa HOM05D000412 ORTHO05D000429 7.3e-11 72.0 96 47.9
Glyma.16G003200 Glycine max HOM05D000412 ORTHO05D000429 7.3e-11 72.0 114 46.5
Phvul.006G218800 Phaseolus vulgaris HOM05D000412 ORTHO05D000429 7.3e-11 72.0 112 46.4
Lj6g0001111 Lotus japonicus HOM05D000412 ORTHO05D000429 1.2e-10 71.2 107 46.7
Lj6g0013996 Lotus japonicus HOM05D000412 ORTHO05D000429 1.2e-10 71.2 107 46.7
Nn5g27427 Nelumbo nucifera HOM05D000412 ORTHO05D000429 1.2e-10 71.2 118 41.5
AUR62032472 Chenopodium quinoa HOM05D000412 ORTHO05D000429 2.8e-10 70.1 96 46.9
SGA_v2.0_scaffold100G29537 Striga asiatica HOM05D000412 ORTHO05D000429 2.8e-10 70.1 169 36.7
Cc02_g23190 Coffea canephora HOM05D000412 ORTHO05D000429 3.6e-10 69.7 159 40.9
Medtr2g005840 Medicago truncatula HOM05D000412 ORTHO05D000429 4.7e-10 69.3 103 43.7
THA.LOC104816813 Tarenaya hassleriana HOM05D000412 ORTHO05D000429 4.7e-10 69.3 122 41.8
ECA234G1418 Erigeron canadensis HOM05D000412 ORTHO05D000429 8.1e-10 68.6 95 49.5
Oeu064600.3 Olea europaea HOM05D000412 ORTHO05D000429 8.1e-10 68.6 66 54.5
VMungo0540G0775 Vigna mungo HOM05D000412 ORTHO05D000429 8.1e-10 68.6 104 44.2
Migut.N00839 Erythranthe guttata HOM05D000412 ORTHO05D000429 2.4e-09 67.0 97 45.4
HanXRQChr10g0294551 Helianthus annuus HOM05D000412 ORTHO05D000429 2.4e-09 67.0 89 49.4
TPR.G2111 Trifolium pratense HOM05D000412 ORTHO05D000429 5.2e-09 65.9 105 42.9
vmacro10956 Vaccinium macrocarpon HOM05D000412 ORTHO05D000429 5.2e-09 65.9 54 63.0
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 9.0e-09 65.1 116 39.7
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 1.2e-08 64.7 108 43.5
EL10Ac8g20567 Beta vulgaris HOM05D000412 ORTHO05D000429 1.5e-08 64.3 97 42.3
HanXRQChr03g0067841 Helianthus annuus HOM05D000412 ORTHO05D000429 2.0e-08 63.9 95 48.4
Lj5A266T85 Lonicera japonica HOM05D000412 ORTHO05D000429 2.6e-08 63.5 342 24.9
Lsat_1_v5_gn_9_120180 Lactuca sativa HOM05D000412 ORTHO05D000429 3.4e-08 63.2 86 53.5
arahy.Tifrunner.gnm1.ann1.WRM861 Arachis hypogaea HOM05D000412 ORTHO05D000429 5.8e-08 62.4 111 44.1
BraA06t23861Z Brassica rapa HOM05D000412 ORTHO05D000429 5.8e-08 62.4 107 39.3
Carub.0001s0917 Capsella rubella HOM05D000412 ORTHO05D000429 5.8e-08 62.4 117 40.2
Thhalv10009895m.g Eutrema salsugineum HOM05D000412 ORTHO05D000429 5.8e-08 62.4 120 40.0
Hund15456 Selenicereus undatus HOM05D000412 ORTHO05D000429 7.6e-08 62.0 96 45.8
BcaC05g24846 Brassica carinata HOM05D000412 ORTHO05D000429 1.3e-07 61.2 107 38.3
A06p06500 Brassica napus HOM05D000412 ORTHO05D000429 1.3e-07 61.2 107 38.3
C05p07910 Brassica napus HOM05D000412 ORTHO05D000429 1.3e-07 61.2 107 38.3
Lalb_Chr20g0123681 Lupinus albus HOM05D000412 ORTHO05D000429 1.3e-07 61.2 119 38.7
BolC5t29542H Brassica oleracea HOM05D000412 ORTHO05D000429 2.2e-07 60.5 107 41.1
Lsat_1_v5_gn_5_103901 Lactuca sativa HOM05D000412 ORTHO05D000429 2.2e-07 60.5 51 60.8
Gohir.A03G215300 Gossypium hirsutum HOM05D000412 ORTHO05D000429 2.9e-07 60.1 147 35.4
SGA_v2.0_scaffold304G47922 Striga asiatica HOM05D000412 ORTHO05D000429 2.9e-07 60.1 190 29.5
THA.LOC104820273 Tarenaya hassleriana HOM05D000412 ORTHO05D000429 2.9e-07 60.1 118 39.0
arahy.Tifrunner.gnm1.ann1.MCG1UL Arachis hypogaea HOM05D000412 ORTHO05D000429 3.8e-07 59.7 122 40.2
DCAR_006670 Daucus carota HOM05D000412 ORTHO05D000429 3.8e-07 59.7 95 41.1
PSO541G0192 Papaver somniferum HOM05D000412 ORTHO05D000429 3.8e-07 59.7 57 49.1
HPP92_005279 Vanilla planifolia HOM05D000412 ORTHO05D000429 3.8e-07 59.7 61 45.9
DCAR_029180 Daucus carota HOM05D000412 ORTHO05D000429 6.4e-07 58.9 171 31.0
Sp1g08420 Schrenkiella parvula HOM05D000412 ORTHO05D000429 8.4e-07 58.5 120 41.7
DCAR_001753 Daucus carota HOM05D000412 ORTHO05D000429 1.1e-06 58.2 47 59.6
Aa31LG1G5140 Aethionema arabicum HOM05D000412 ORTHO05D000429 1.4e-06 57.8 67 50.7
PSO675G6246 Papaver somniferum HOM05D000412 ORTHO05D000429 1.4e-06 57.8 57 47.4
Nn1g09870 Nelumbo nucifera HOM05D000412 ORTHO05D000429 2.4e-06 57.0 65 41.5
CARHR009800 Cardamine hirsuta HOM05D000412 ORTHO05D000429 3.2e-06 56.6 116 38.8
DCAR_001754 Daucus carota HOM05D000412 ORTHO05D000429 4.2e-06 56.2 43 67.4
Nn4g25684 Nelumbo nucifera HOM05D000412 ORTHO05D043747 5.4e-06 55.8 51 51.0
ATR0737G129 Amborella trichopoda HOM05D000412 ORTHO05D000429 7.1e-06 55.5 61 44.3
MSTRG.5209 Avicennia marina HOM05D000412 ORTHO05D000429 7.1e-06 55.5 41 63.4
MBI07_g10926_MAGBIO Magnolia biondii HOM05D000412 ORTHO05D000429 7.1e-06 55.5 61 42.6
AL1G20390 Arabidopsis lyrata HOM05D000412 ORTHO05D000429 9.3e-06 55.1 112 40.2
MBI06_g04185_MAGBIO Magnolia biondii HOM05D000412 ORTHO05D000429 9.3e-06 55.1 61 44.3
MBI15_g03045_MAGBIO Magnolia biondii HOM05D003226 ORTHO05D011648 9.3e-06 55.1 57 47.4
Zm00001eb360390 Zea mays HOM05D000412 ORTHO05D000429 9.3e-06 55.1 57 45.6


User provided reference genes

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