Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 1.0e-76 290.0 153 100.0
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 5.9e-32 141.4 174 57.5
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 6.2e-29 131.3 190 49.5
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 1.1e-25 120.6 168 53.0
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 1.4e-25 120.2 141 53.9
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.9e-25 119.8 170 51.2
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 3.2e-25 119.0 177 46.9
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.0e-23 114.0 185 48.1
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 1.3e-23 113.6 169 49.7
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 1.7e-23 113.2 173 45.7
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 5.0e-23 111.7 163 49.1
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 5.0e-23 111.7 171 49.1
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 3.3e-22 109.0 168 49.4
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 5.6e-22 108.2 175 44.6
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 2.1e-21 106.3 177 49.7
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 2.8e-21 105.9 173 44.5
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 3.6e-21 105.5 177 45.2
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 1.8e-20 103.2 188 45.2
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 3.1e-20 102.4 171 48.0
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 4.0e-20 102.1 172 46.5
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 4.0e-20 102.1 171 46.2
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 2.0e-19 99.8 180 45.6
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 3.4e-19 99.0 173 48.0
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 3.4e-19 99.0 160 44.4
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 4.4e-19 98.6 175 44.6
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 7.5e-19 97.8 172 44.2
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 7.5e-19 97.8 163 44.8
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 9.8e-19 97.4 162 45.1
FAN18G0201 Fragaria x ananassa HOM05D031323 ORTHO05D010082 2.2e-18 96.3 157 49.7
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 6.4e-18 94.7 174 44.8
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 1.1e-17 94.0 150 48.7
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 1.1e-17 94.0 156 48.7
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 4.1e-17 92.0 178 42.7
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 5.4e-17 91.7 177 41.2
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 5.4e-17 91.7 204 40.2
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 7.1e-17 91.3 202 41.6
RcHm_v2.0_Chr7g0220641 Rosa chinensis HOM05D031323 ORTHO05D010082 1.6e-16 90.1 154 47.4
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 1.0e-15 87.4 201 40.3
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 3.9e-15 85.5 194 38.1
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 5.1e-15 85.1 159 43.4
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 6.6e-15 84.7 198 39.4
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 1.9e-14 83.2 153 43.1
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 1.2e-13 80.5 78 59.0
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.2e-13 80.5 136 47.1
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.2e-13 80.5 175 38.9
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 1.6e-13 80.1 201 37.3
Potri.019G078000 Populus trichocarpa HOM05D008094 ORTHO05D010082 6.2e-13 78.2 169 38.5
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 2.3e-12 76.3 98 53.1
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 5.2e-12 75.1 173 39.9
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 6.8e-12 74.7 121 47.9
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 6.8e-12 74.7 130 45.4
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 3.4e-11 72.4 144 45.8
Atru.chr6.518 Acer truncatum HOM05D008094 ORTHO05D010082 5.8e-11 71.6 157 39.5
Sabra19G0088900 Salix brachista HOM05D008094 ORTHO05D010082 1.7e-10 70.1 161 35.4
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 2.2e-10 69.7 111 47.7
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 2.2e-10 69.7 111 47.7
Peaxi162Scf00011g01411 Petunia axillaris HOM05D008094 ORTHO05D010082 4.9e-10 68.6 205 36.6
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 4.9e-10 68.6 157 41.4
Glyma.16G002700 Glycine max HOM05D008094 ORTHO05D010082 6.4e-10 68.2 96 53.1
Oeu021214.1 Olea europaea HOM05D008094 ORTHO05D010082 1.1e-09 67.4 166 35.5
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 1.4e-09 67.0 154 40.9
Oeu045164.1 Olea europaea HOM05D008094 ORTHO05D010082 4.1e-09 65.5 120 44.2
FvH4_5g28660 Fragaria vesca HOM05D031323 ORTHO05D010082 2.1e-08 63.2 124 45.2
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 2.1e-08 63.2 193 37.3
C07p53530 Brassica napus HOM05D010278 ORTHO05D012429 4.6e-08 62.0 87 47.1
Migut.C01270 Erythranthe guttata HOM05D008094 ORTHO05D010082 4.6e-08 62.0 175 37.1
BcaC06g32890 Brassica carinata HOM05D010278 ORTHO05D012429 7.8e-08 61.2 87 47.1
BolC7t45845H Brassica oleracea HOM05D010278 ORTHO05D012429 1.0e-07 60.8 90 45.6
Lsat_1_v5_gn_7_76841 Lactuca sativa HOM05D008094 ORTHO05D010082 1.0e-07 60.8 77 44.2
CARHR231710 Cardamine hirsuta HOM05D010278 ORTHO05D012429 2.3e-07 59.7 88 48.9
Glyma.12G166400 Glycine max HOM05D008094 ORTHO05D010082 8.6e-07 57.8 115 42.6
PSO782G4978 Papaver somniferum HOM05D008094 ORTHO05D010082 8.6e-07 57.8 115 40.9
Cfa012997 Carpinus fangiana HOM05D008094 ORTHO05D010082 1.1e-06 57.4 162 35.8
AL7G28970 Arabidopsis lyrata HOM05D010278 ORTHO05D012429 4.3e-06 55.5 89 44.9
Nitab4.5_0001579g0050 Nicotiana tabacum HOM05D036302 ORTHO05D010082 7.3e-06 54.7 104 42.3
ECA234G3545 Erigeron canadensis HOM05D008094 ORTHO05D010082 9.6e-06 54.3 206 31.1


User provided reference genes

Program Settings