Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 7.3e-150 533.9 270 100.0
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 1.6e-141 506.1 286 92.0
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.1e-134 483.4 271 89.7
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.7e-130 468.4 270 87.4
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.7e-127 459.5 260 87.7
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.9e-126 456.1 262 87.8
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 5.8e-123 444.5 259 85.3
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 2.2e-122 442.6 262 84.4
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 2.2e-122 442.6 263 84.4
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.8e-122 441.8 263 82.5
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.8e-122 441.8 263 82.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.1e-121 440.3 263 84.0
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 1.4e-121 439.9 262 84.0
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 2.7e-120 435.6 266 81.2
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 2.7e-120 435.6 264 82.6
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.0e-119 433.7 265 80.0
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.7e-119 433.0 265 81.9
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 5.1e-119 431.4 269 79.9
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 6.6e-119 431.0 253 82.6
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 6.6e-119 431.0 269 80.3
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 6.6e-119 431.0 256 84.0
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.5e-118 429.9 266 80.8
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.9e-118 429.5 262 81.3
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 4.3e-118 428.3 267 81.3
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 4.3e-118 428.3 252 81.7
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 7.3e-118 427.6 260 81.2
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.1e-117 426.0 268 79.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 8.1e-117 424.1 253 83.0
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 8.1e-117 424.1 255 83.1
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 5.3e-116 421.4 260 79.2
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 6.9e-116 421.0 267 77.5
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.5e-115 419.9 245 82.9
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 4.4e-115 418.3 261 80.8
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 5.8e-115 417.9 245 84.1
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 7.6e-115 417.5 268 80.6
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 9.9e-115 417.2 261 79.3
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.3e-114 416.8 245 83.7
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.3e-114 416.8 243 84.4
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.2e-114 416.0 259 79.2
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.8e-114 415.2 268 78.0
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 3.8e-114 415.2 267 77.9
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 3.8e-114 415.2 271 76.8
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 3.8e-114 415.2 271 76.8
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 3.8e-114 415.2 266 75.2
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 3.8e-114 415.2 264 78.0
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 4.9e-114 414.8 262 78.6
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 6.4e-114 414.5 267 76.4
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 1.4e-113 413.3 259 79.2
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 1.9e-113 412.9 260 78.8
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 4.2e-113 411.8 259 78.8
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 5.4e-113 411.4 260 78.8
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.2e-112 410.2 262 79.4
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 6.0e-112 407.9 271 76.0
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 6.0e-112 407.9 271 76.0
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 6.0e-112 407.9 271 76.0
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 1.7e-111 406.4 283 73.5
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 2.3e-111 406.0 262 78.6
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 3.0e-111 405.6 255 78.8
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 3.9e-111 405.2 292 71.6
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 5.6e-110 401.4 259 76.4
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 9.6e-110 400.6 263 76.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 6.2e-109 397.9 253 77.1
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 4.0e-108 395.2 229 84.3
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 4.9e-106 388.3 267 74.9
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 6.4e-106 387.9 228 82.9
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 9.3e-105 384.0 217 85.7
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.6e-104 383.3 263 74.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 3.3e-102 375.6 252 74.2
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 1.4e-100 370.2 220 82.7
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.3e-98 363.6 217 79.3
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 1.7e-98 363.2 219 80.4
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 2.9e-98 362.5 201 85.6
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 6.5e-98 361.3 325 58.5
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.5e-97 358.2 242 71.5
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 3.0e-95 352.4 261 70.1
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 8.7e-95 350.9 221 75.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 5.7e-94 348.2 214 77.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.6e-93 346.7 214 79.0
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.1e-92 342.0 211 76.3
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.1e-89 334.0 270 64.1
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.4e-89 333.6 253 66.4
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.7e-88 329.3 194 81.4
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 5.1e-87 325.1 259 63.7
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 3.8e-82 308.9 166 86.1
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 2.5e-81 306.2 198 77.3
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.2e-81 305.4 291 57.4
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 6.1e-80 301.6 253 60.1
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.0e-79 300.8 175 82.9
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.5e-75 285.4 244 57.8
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.2e-74 283.1 244 58.2
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.9e-74 282.7 238 61.8
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 1.1e-73 280.8 201 70.1
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.5e-73 279.6 191 72.3
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 5.7e-70 268.5 205 67.8
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.9e-65 253.4 246 53.3
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 2.7e-64 249.6 180 67.2
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 6.1e-64 248.4 231 54.5
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.5e-59 232.6 260 51.2
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 2.3e-55 219.9 139 77.0
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 2.7e-51 206.5 126 76.2
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 5.0e-50 202.2 229 49.8
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 2.5e-33 146.7 92 82.6
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 8.9e-31 138.3 92 77.2
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 8.6e-26 121.7 106 60.4
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.5e-22 110.9 101 49.5
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 2.6e-22 110.2 78 66.7
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.6e-22 110.2 129 48.8
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-22 108.6 119 48.7
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 6.0e-19 99.0 57 82.5
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 5.6e-17 92.4 59 86.4
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.7e-16 89.4 106 45.3
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.2e-11 74.7 216 29.2
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 6.0e-11 72.4 47 66.0
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 1.1e-09 68.2 41 73.2
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 1.9e-09 67.4 51 70.6
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 2.8e-08 63.5 201 27.4
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 5.8e-06 55.8 32 87.5


User provided reference genes

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