Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004358 Carpinus fangiana HOM05D007945 ORTHO05D010049 3.3e-127 458.4 231 100.0
Haze_15050 Corylus avellana HOM05D007945 ORTHO05D010049 3.2e-106 388.7 233 90.1
QL06p047569 Quercus lobata HOM05D007945 ORTHO05D010049 2.1e-57 226.5 229 63.3
CiPaw.01G047400 Carya illinoinensis HOM05D007945 ORTHO05D010049 1.9e-50 203.4 237 58.2
CiPaw.02G021700 Carya illinoinensis HOM05D007945 ORTHO05D010049 8.4e-38 161.4 229 51.5
Thecc.01G092700 Theobroma cacao HOM05D007945 ORTHO05D010049 4.6e-36 155.6 227 48.5
MD15G1315600 Malus domestica HOM05D007945 ORTHO05D010049 5.6e-34 148.7 201 49.8
Gorai.007G233700 Gossypium raimondii HOM05D007945 ORTHO05D010049 4.9e-30 135.6 224 44.6
Hma1.2p1_0045F.1_g026430 Hydrangea macrophylla HOM05D007945 ORTHO05D010049 1.9e-29 133.7 128 65.6
Atru.chr3.1299 Acer truncatum HOM05D007945 ORTHO05D010049 2.4e-29 133.3 179 52.0
Dinv20782 Davidia involucrata HOM05D007945 ORTHO05D010049 2.1e-28 130.2 155 56.1
Glyma.01G024900 Glycine max HOM05D007945 ORTHO05D010049 1.5e-26 124.0 200 43.0
Gohir.D11G217700 Gossypium hirsutum HOM05D007945 ORTHO05D010049 4.3e-26 122.5 162 51.9
Glyma.02G040200 Glycine max HOM05D007945 ORTHO05D010049 2.1e-25 120.2 201 43.3
RcHm_v2.0_Chr2g0111971 Rosa chinensis HOM05D007945 ORTHO05D010049 2.8e-25 119.8 198 44.9
MELO3C007726.2 Cucumis melo HOM05D007945 ORTHO05D010049 8.1e-25 118.2 126 57.1
Lj4C272T2 Lonicera japonica HOM05D007945 ORTHO05D010049 1.8e-24 117.1 163 47.2
Rhsim08G0014600 Rhododendron simsii HOM05D007945 ORTHO05D010049 1.8e-24 117.1 134 56.7
Prupe.6G196100 Prunus persica HOM05D007945 ORTHO05D010049 3.1e-24 116.3 199 44.2
Ciclev10027143m.g Citrus clementina HOM05D007945 ORTHO05D010049 1.2e-23 114.4 145 52.4
TAR376G1002 Trochodendron aralioides HOM05D007945 ORTHO05D010049 1.2e-23 114.4 173 48.0
Cc07_g14340 Coffea canephora HOM05D007945 ORTHO05D010049 2.0e-23 113.6 148 52.0
Manes.13G098400 Manihot esculenta HOM05D007945 ORTHO05D010049 3.4e-23 112.8 178 45.5
Oeu053574.1 Olea europaea HOM05D007945 ORTHO05D010049 3.4e-23 112.8 165 48.5
Aqoxy5G01332 Aquilegia oxysepala HOM05D007945 ORTHO05D010049 5.8e-23 112.1 197 43.1
COL.COLO4_27337 Corchorus olitorius HOM05D007945 ORTHO05D010049 7.6e-23 111.7 170 47.6
Nn1g05498 Nelumbo nucifera HOM05D007945 ORTHO05D010049 1.3e-22 110.9 133 57.9
Phvul.002G148800 Phaseolus vulgaris HOM05D007945 ORTHO05D010049 1.3e-22 110.9 233 39.1
FvH4_1g20030 Fragaria vesca HOM05D007945 ORTHO05D010049 1.7e-22 110.5 200 44.5
Sed0020490 Sechium edule HOM05D007945 ORTHO05D010049 2.2e-22 110.2 133 52.6
ClCG01G018480 Citrullus lanatus HOM05D007945 ORTHO05D010049 2.9e-22 109.8 128 52.3
FAN19G2492 Fragaria x ananassa HOM05D007945 ORTHO05D010049 3.8e-22 109.4 200 45.0
VMungo1215G0385 Vigna mungo HOM05D007945 ORTHO05D010049 1.1e-21 107.8 223 38.1
FAN28G1827 Fragaria x ananassa HOM05D007945 ORTHO05D010049 1.9e-21 107.1 134 53.0
MBI02_g18288_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D002064 7.1e-21 105.1 130 53.8
FAN26G0842 Fragaria x ananassa HOM05D007945 ORTHO05D010049 1.2e-20 104.4 200 43.5
Solyc04g013200.1 Solanum lycopersicum HOM05D007945 ORTHO05D010049 3.5e-20 102.8 139 48.9
CsaV3_6G045130 Cucumis sativus L. HOM05D007945 ORTHO05D010049 4.6e-20 102.4 135 49.6
Actinidia30841 Actinidia chinensis HOM05D007945 ORTHO05D010049 8.7e-19 98.2 115 55.7
CANSAT01G1602 Cannabis sativa HOM05D007945 ORTHO05D010049 1.1e-18 97.8 152 42.8
Lj2g0025684 Lotus japonicus HOM05D007945 ORTHO05D010049 2.5e-18 96.7 157 45.9
PGSC0003DMG400023581 Solanum tuberosum HOM05D007945 ORTHO05D010049 2.5e-18 96.7 129 50.4
TAR628G0666 Trochodendron aralioides HOM05D007577 ORTHO05D002366 9.6e-18 94.7 210 39.0
Lalb_Chr16g0381801 Lupinus albus HOM05D007945 ORTHO05D010049 2.8e-17 93.2 164 39.6
Migut.K00772 Erythranthe guttata HOM05D007945 ORTHO05D010049 6.2e-17 92.0 141 44.7
THA.LOC104807860 Tarenaya hassleriana HOM05D007945 ORTHO05D010049 6.2e-17 92.0 91 59.3
Sopen04g006380 Solanum pennellii HOM05D007945 ORTHO05D010049 8.2e-17 91.7 141 46.1
Nitab4.5_0000902g0130 Nicotiana tabacum HOM05D007945 ORTHO05D010049 1.1e-16 91.3 144 43.8
Nitab4.5_0001122g0120 Nicotiana tabacum HOM05D007945 ORTHO05D010049 1.8e-16 90.5 160 42.5
PGR102G2218 Punica granatum HOM05D007945 ORTHO05D010049 2.4e-16 90.1 157 44.6
Ca_04542_v3 Cicer arietinum L. HOM05D007945 ORTHO05D010049 1.2e-15 87.8 131 45.8
Psat2g081080 Pisum sativum HOM05D007945 ORTHO05D010049 4.5e-15 85.9 131 45.0
TPR.G29980 Trifolium pratense HOM05D007945 ORTHO05D010049 5.8e-15 85.5 131 47.3
Medtr5g032580 Medicago truncatula HOM05D007945 ORTHO05D010049 2.2e-14 83.6 135 46.7
Sc03g0000270 Simmondsia chinensis HOM05D007945 ORTHO05D010049 2.2e-14 83.6 130 43.1
SGA_v2.0_scaffold45G17252 Striga asiatica HOM05D007945 ORTHO05D010049 4.9e-14 82.4 128 45.3
TWI74G0422 Tripterygium wilfordii HOM05D007945 ORTHO05D010049 4.9e-14 82.4 153 40.5
ECA232G3960 Erigeron canadensis HOM05D007945 ORTHO05D010049 8.4e-14 81.6 137 45.3
DCAR_003454 Daucus carota HOM05D007945 ORTHO05D010049 1.1e-13 81.3 155 39.4
Peaxi162Scf00569g00003 Petunia axillaris HOM05D007945 ORTHO05D010049 1.1e-13 81.3 141 41.8
Cpa.g.sc55.53 Carica papaya HOM05D007945 ORTHO05D010049 1.4e-13 80.9 173 38.2
arahy.Tifrunner.gnm1.ann1.A6KDPG Arachis hypogaea HOM05D007945 ORTHO05D010049 2.5e-13 80.1 231 33.3
arahy.Tifrunner.gnm1.ann1.N1XH1Z Arachis hypogaea HOM05D007945 ORTHO05D010049 2.5e-13 80.1 231 33.3
EL10Ac6g14794 Beta vulgaris HOM05D007945 ORTHO05D010049 3.2e-13 79.7 133 43.6
ATR0022G034 Amborella trichopoda HOM05D007945 ORTHO05D010049 1.6e-12 77.4 150 37.3
CARHR246510 Cardamine hirsuta HOM05D007945 ORTHO05D010049 1.6e-12 77.4 100 48.0
Thhalv10026515m.g Eutrema salsugineum HOM05D007945 ORTHO05D010049 1.0e-11 74.7 127 40.9
Carub.0007s0210 Capsella rubella HOM05D007945 ORTHO05D010049 1.8e-11 73.9 90 50.0
HanXRQChr09g0259601 Helianthus annuus HOM05D007945 ORTHO05D010049 1.8e-11 73.9 126 46.0
BcaB03g12302 Brassica carinata HOM05D007945 ORTHO05D010049 2.3e-11 73.6 108 43.5
AL7G12470 Arabidopsis lyrata HOM05D007945 ORTHO05D010049 3.9e-11 72.8 111 45.0
BcaC01g00344 Brassica carinata HOM05D007945 ORTHO05D010049 5.1e-11 72.4 118 41.5
BolC3t20117H Brassica oleracea HOM05D007945 ORTHO05D010049 5.1e-11 72.4 118 41.5
A08p23120 Brassica napus HOM05D007945 ORTHO05D010049 8.7e-11 71.6 118 41.5
BraA08t34270Z Brassica rapa HOM05D007945 ORTHO05D010049 8.7e-11 71.6 118 41.5
C03p78720 Brassica napus HOM05D007945 ORTHO05D010049 1.5e-10 70.9 118 40.7
Sp7g35750 Schrenkiella parvula HOM05D007945 ORTHO05D010049 1.5e-10 70.9 118 41.5
AT1G26290 Arabidopsis thaliana HOM05D007945 ORTHO05D010049 1.9e-10 70.5 110 41.8


User provided reference genes

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