Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 4.4e-89 331.3 166 100.0
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 8.1e-67 257.3 167 80.8
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.6e-62 243.0 166 76.5
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 1.7e-53 213.0 168 64.9
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 6.6e-53 211.1 163 66.9
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 2.8e-51 205.7 163 66.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 3.6e-51 205.3 167 65.3
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 1.3e-48 196.8 169 63.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 3.8e-48 195.3 164 62.8
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.4e-47 193.4 167 62.3
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 1.9e-47 193.0 174 61.5
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.4e-47 192.6 171 57.9
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.2e-47 191.8 171 57.9
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.2e-47 191.8 171 57.3
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 3.5e-46 188.7 171 60.8
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.5e-46 188.7 167 60.5
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.7e-45 186.4 167 61.1
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.7e-45 186.4 168 57.7
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 6.6e-45 184.5 165 60.6
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.5e-44 183.3 179 54.7
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.9e-44 183.0 158 60.8
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 3.3e-44 182.2 179 54.7
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 5.6e-44 181.4 154 62.3
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.3e-44 181.0 175 54.9
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 9.6e-44 180.6 168 60.1
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 3.6e-43 178.7 171 53.2
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 4.8e-43 178.3 166 56.0
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 6.9e-42 174.5 164 59.1
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.5e-41 173.3 172 52.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 3.4e-41 172.2 170 52.9
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.3e-40 170.2 169 53.8
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.9e-40 169.1 169 54.4
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.1e-39 167.2 166 54.2
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.4e-39 166.8 166 54.2
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.9e-39 166.4 170 51.8
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 3.2e-39 165.6 166 54.8
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 3.2e-39 165.6 167 53.3
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 9.3e-39 164.1 175 55.4
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 9.3e-39 164.1 174 55.7
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 2.1e-38 162.9 162 55.6
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 2.7e-38 162.5 132 65.9
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.0e-37 160.6 168 60.1
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 2.3e-37 159.5 175 52.0
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 2.3e-37 159.5 155 57.4
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 5.1e-37 158.3 164 53.0
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 1.9e-36 156.4 194 46.9
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 7.4e-36 154.5 131 62.6
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.3e-35 153.7 162 53.7
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 8.1e-35 151.0 158 53.8
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.1e-34 150.6 136 59.6
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 3.1e-34 149.1 134 59.0
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 4.0e-34 148.7 155 56.8
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.0e-34 148.7 160 53.1
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 2.0e-33 146.4 169 50.3
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 3.4e-33 145.6 158 52.5
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 7.6e-33 144.4 146 56.2
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 3.8e-32 142.1 160 51.2
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 7.1e-31 137.9 156 51.3
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.2e-30 137.1 157 51.0
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 2.3e-29 132.9 136 52.9
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 6.7e-29 131.3 152 46.1
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 1.9e-28 129.8 159 46.5
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 3.3e-28 129.0 136 51.5
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 7.4e-28 127.9 137 51.1
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 6.2e-27 124.8 160 46.2
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.1e-26 124.0 135 48.9
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.4e-26 123.6 146 48.6
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 5.3e-26 121.7 131 51.9
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 1.5e-25 120.2 107 59.8
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 5.0e-24 115.2 138 50.7
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 5.0e-24 115.2 116 52.6
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 5.0e-24 115.2 166 45.2
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 4.2e-23 112.1 138 47.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 7.1e-23 111.3 126 46.8
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.0e-21 107.5 107 51.4
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.8e-21 106.7 96 60.4
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 4.8e-19 98.6 122 50.0
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 4.1e-18 95.5 171 40.4
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.3e-16 90.5 83 56.6
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.7e-14 82.8 123 42.3
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 6.1e-06 55.1 136 31.6


User provided reference genes

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