Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa004229 Carpinus fangiana HOM05D008334 ORTHO05D010366 4.2e-63 244.6 130 100.0
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 2.0e-41 172.6 103 89.3
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 6.0e-25 117.9 106 66.0
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 2.0e-20 102.8 109 51.4
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 5.8e-20 101.3 106 58.5
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 6.4e-19 97.8 103 51.5
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 1.6e-17 93.2 103 46.6
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 1.6e-14 83.2 103 47.6
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 2.8e-14 82.4 113 46.0
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 3.6e-14 82.0 106 44.3
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 6.2e-14 81.3 108 50.0
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 3.1e-13 79.0 110 43.6
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 9.0e-13 77.4 108 48.1
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 1.2e-12 77.0 104 47.1
Rhsim08G0109000 Rhododendron simsii HOM05D008334 ORTHO05D010366 4.4e-12 75.1 106 45.3
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 7.6e-12 74.3 105 47.6
Nitab4.5_0000108g0210 Nicotiana tabacum HOM05D008334 ORTHO05D010366 9.9e-12 73.9 92 47.8
VMungo0251G2655 Vigna mungo HOM05D008334 ORTHO05D010366 2.2e-11 72.8 105 43.8
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 3.8e-11 72.0 107 44.9
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 4.9e-11 71.6 111 44.1
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 6.4e-11 71.2 90 44.4
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 8.4e-11 70.9 82 52.4
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 1.1e-10 70.5 107 44.9
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 1.4e-10 70.1 107 41.1
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 1.9e-10 69.7 108 45.4
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 2.4e-10 69.3 106 40.6
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 2.4e-10 69.3 108 45.4
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 2.4e-10 69.3 102 46.1
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 3.2e-10 68.9 130 39.2
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 4.2e-10 68.6 108 44.4
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 5.4e-10 68.2 111 43.2
PGSC0003DMG400010112 Solanum tuberosum HOM05D008334 ORTHO05D010366 5.4e-10 68.2 88 47.7
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.2e-09 67.0 106 44.3
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 1.6e-09 66.6 112 41.1
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 2.7e-09 65.9 109 40.4
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 2.7e-09 65.9 110 46.4
Medtr8g078960 Medicago truncatula HOM05D008334 ORTHO05D010366 3.5e-09 65.5 109 40.4
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 1.0e-08 63.9 104 41.3
CAN.G836.22 Capsicum annuum HOM05D008334 ORTHO05D012551 1.3e-08 63.5 102 43.1
VMungo1215G2475 Vigna mungo HOM05D008334 ORTHO05D010366 1.3e-08 63.5 96 43.8
Gohir.D10G094300 Gossypium hirsutum HOM05D008334 ORTHO05D010366 3.9e-08 62.0 103 41.7
Gorai.011G103700 Gossypium raimondii HOM05D008334 ORTHO05D010366 3.9e-08 62.0 103 41.7
Gohir.A11G045200 Gossypium hirsutum HOM05D008334 ORTHO05D010366 5.1e-08 61.6 108 40.7
Gohir.D11G048700 Gossypium hirsutum HOM05D008334 ORTHO05D010366 5.1e-08 61.6 108 40.7
Gorai.007G052300 Gossypium raimondii HOM05D008334 ORTHO05D010366 5.1e-08 61.6 108 40.7
Phvul.003G249200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 6.6e-08 61.2 105 41.0
Sopen02g034820 Solanum pennellii HOM05D008334 ORTHO05D010366 6.6e-08 61.2 88 45.5
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.5e-07 60.1 112 38.4
Dinv39913 Davidia involucrata HOM05D008334 ORTHO05D010366 2.5e-07 59.3 85 48.2
Gohir.A10G093800 Gossypium hirsutum HOM05D008334 ORTHO05D010366 2.5e-07 59.3 103 40.8
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 2.5e-07 59.3 102 41.2
Cpa.g.sc15.75 Carica papaya HOM05D008334 ORTHO05D010366 3.3e-07 58.9 101 40.6
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 3.3e-07 58.9 111 37.8
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 5.6e-07 58.2 112 37.5
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 7.3e-07 57.8 88 42.0
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 7.3e-07 57.8 75 45.3
Eucgr.I01021 Eucalyptus grandis HOM05D008334 ORTHO05D010366 9.6e-07 57.4 111 36.9
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 1.3e-06 57.0 69 49.3
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.6e-06 56.6 104 37.5
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.6e-06 56.6 104 37.5
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 2.1e-06 56.2 111 37.8
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 2.1e-06 56.2 111 37.8
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 2.1e-06 56.2 89 41.6
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 3.6e-06 55.5 88 40.9
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 3.6e-06 55.5 100 35.0
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 3.6e-06 55.5 104 40.4
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 4.8e-06 55.1 93 39.8
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 4.8e-06 55.1 112 38.4
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 6.2e-06 54.7 69 46.4
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 6.2e-06 54.7 80 41.2


User provided reference genes

Program Settings